Guide to the Human Genome
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Name: MSL3 Sequence: fasta or formatted (462aa) NCBI GI: 17975759
Description:

male-specific lethal 3-like 1 isoform b

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt prot [416aa] male-specific lethal 3-like 1 isoform d
alt prot [355aa] male-specific lethal 3-like 1 isoform c
alt prot [521aa] male-specific lethal 3-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         29           2
 C cysteine            1.5          7           1
 D aspartate           4.8         22           2
 E glutamate          10.0         46           2
 F phenylalanine       3.2         15           2
 G glycine             2.4         11           1
 H histidine           3.0         14           3
 I isoleucine          3.9         18           2
 K lysine              7.6         35           3
 L leucine             9.5         44           2
 M methionine          1.5          7           1
 N asparagine          4.1         19           1
 P proline             8.2         38           4
 Q glutamine           3.2         15           2
 R arginine            7.6         35           2
 S serine              9.5         44           4
 T threonine           5.4         25           2
 V valine              4.3         20           1
 W tryptophan          0.6          3           1
 Y tyrosine            3.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   male-specific lethal 3-like 1 isoform b 
MSL3                  0.995   male-specific lethal 3-like 1 isoform a 
MSL3                  0.767   male-specific lethal 3-like 1 isoform c 
MSL3                  0.698   male-specific lethal 3-like 1 isoform d 
MORF4L1               0.045   MORF-related gene 15 isoform 2 
MORF4L1               0.044   MORF-related gene 15 isoform 1 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
PELP1                 0.024   proline, glutamic acid and leucine rich protein 1 [...
MORF4                 0.022   mortality factor 4 
SRRM2                 0.022   splicing coactivator subunit SRm300 
DAXX                  0.022   death-domain associated protein isoform a 
DAXX                  0.022   death-domain associated protein isoform a 
DAXX                  0.022   death-domain associated protein isoform b 
LOC728792             0.019   PREDICTED: hypothetical protein 
CRKRS                 0.016   Cdc2-related kinase, arginine/serine-rich isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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