Guide to the Human Genome
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Name: SIRT3 Sequence: fasta or formatted (257aa) NCBI GI: 63054862
Description:

sirtuin 3 isoform b

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Mitochondria

Other entries for this name:
alt prot [399aa] sirtuin 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         14           1
 C cysteine            1.6          4           1
 D aspartate           6.2         16           1
 E glutamate           5.8         15           2
 F phenylalanine       5.8         15           3
 G glycine             7.8         20           1
 H histidine           2.7          7           1
 I isoleucine          3.5          9           1
 K lysine              3.1          8           1
 L leucine            13.2         34           3
 M methionine          1.6          4           1
 N asparagine          2.3          6           1
 P proline             9.3         24           1
 Q glutamine           2.7          7           2
 R arginine            6.2         16           1
 S serine              5.4         14           2
 T threonine           4.7         12           1
 V valine              8.9         23           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sirtuin 3 isoform b 
SIRT3                 1.000   sirtuin 3 isoform a 
SIRT2                 0.487   sirtuin 2 isoform 1 
SIRT2                 0.487   sirtuin 2 isoform 2 
SIRT1                 0.316   sirtuin 1 isoform a 
SIRT1                 0.258   sirtuin 1 isoform b 
SIRT6                 0.109   sirtuin 6 
SIRT4                 0.109   sirtuin 4 
SIRT5                 0.109   sirtuin 5 isoform 2 
SIRT5                 0.109   sirtuin 5 isoform 1 
SIRT7                 0.074   sirtuin 7 
GLB1                  0.010   galactosidase, beta 1 isoform b 
GLB1                  0.010   galactosidase, beta 1 isoform a preproprotein [Homo...
DMRT3                 0.010   doublesex and mab-3 related transcription factor 3 [...
EYA1                  0.008   eyes absent 1 isoform b 
EYA1                  0.008   eyes absent 1 isoform b 
EYA1                  0.008   eyes absent 1 isoform a 
SPTB                  0.006   spectrin beta isoform a 
SPTB                  0.006   spectrin beta isoform b 
ZYX                   0.006   zyxin 
ZYX                   0.006   zyxin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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