Guide to the Human Genome
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Name: MSL3 Sequence: fasta or formatted (416aa) NCBI GI: 17975755
Description:

male-specific lethal 3-like 1 isoform d

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt prot [462aa] male-specific lethal 3-like 1 isoform b
alt prot [355aa] male-specific lethal 3-like 1 isoform c
alt prot [521aa] male-specific lethal 3-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         24           2
 C cysteine            2.4         10           1
 D aspartate           5.0         21           2
 E glutamate          10.1         42           2
 F phenylalanine       3.1         13           2
 G glycine             2.9         12           1
 H histidine           2.6         11           3
 I isoleucine          4.3         18           2
 K lysine              8.2         34           3
 L leucine             8.2         34           2
 M methionine          1.7          7           1
 N asparagine          3.8         16           1
 P proline             6.7         28           2
 Q glutamine           3.6         15           2
 R arginine            8.4         35           2
 S serine              9.1         38           4
 T threonine           5.3         22           2
 V valine              5.0         21           1
 W tryptophan          1.0          4           1
 Y tyrosine            2.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   male-specific lethal 3-like 1 isoform d 
MSL3                  0.929   male-specific lethal 3-like 1 isoform a 
MSL3                  0.774   male-specific lethal 3-like 1 isoform b 
MSL3                  0.522   male-specific lethal 3-like 1 isoform c 
MORF4L1               0.094   MORF-related gene 15 isoform 1 
MORF4L1               0.073   MORF-related gene 15 isoform 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
MORF4L2               0.029   mortality factor 4 like 2 
ARID4A                0.029   retinoblastoma-binding protein 1 isoform III 
ARID4A                0.029   retinoblastoma-binding protein 1 isoform II 
ARID4A                0.029   retinoblastoma-binding protein 1 isoform I 
MORF4                 0.024   mortality factor 4 
DAXX                  0.024   death-domain associated protein isoform a 
DAXX                  0.024   death-domain associated protein isoform a 
DAXX                  0.024   death-domain associated protein isoform b 
ARID4B                0.024   AT rich interactive domain 4B isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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