Guide to the Human Genome
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Name: ANKRD12 Sequence: fasta or formatted (2062aa) NCBI GI: 134948558
Description:

ankyrin repeat domain 12 isoform 1

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [2039aa] ankyrin repeat domain 12 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         76           3
 C cysteine            1.3         27           1
 D aspartate           6.9        143           4
 E glutamate          10.9        225           2
 F phenylalanine       2.5         52           2
 G glycine             2.6         53           2
 H histidine           2.9         60           2
 I isoleucine          4.2         86           2
 K lysine             12.8        263           3
 L leucine             7.7        159           3
 M methionine          1.7         36           1
 N asparagine          4.7         97           1
 P proline             5.3        109           3
 Q glutamine           4.5         92           2
 R arginine            4.4         91           2
 S serine             12.0        247           4
 T threonine           5.4        111           2
 V valine              4.3         89           2
 W tryptophan          0.3          7           1
 Y tyrosine            1.9         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 12 isoform 1 
ANKRD12               0.985   ankyrin repeat domain 12 isoform 2 
ANKRD11               0.122   ankyrin repeat domain 11 
BARD1                 0.027   BRCA1 associated RING domain 1 
ANKRD31               0.025   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.025   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.025   PREDICTED: ankyrin repeat domain 31 
LOC283685             0.021   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283767             0.021   golgi autoantigen, golgin subfamily a-like 
NEFH                  0.021   neurofilament, heavy polypeptide 200kDa 
BOD1L                 0.019   biorientation of chromosomes in cell division 1-like...
LOC727832             0.019   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.019   PREDICTED: golgi autoantigen, golgin subfamily a-li...
PPP1R12A              0.019   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.019   protein phosphatase 1, regulatory (inhibitor) subunit...
NFKBIL2               0.019   NF-kappa-B inhibitor-like protein 2 
TNKS                  0.019   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
LOC100286959          0.019   PREDICTED: hypothetical protein XP_002343921 
TCHH                  0.019   trichohyalin 
TAF3                  0.019   RNA polymerase II transcription factor TAFII140 [Ho...
TNKS2                 0.018   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PPIG                  0.018   peptidylprolyl isomerase G 
EIF5B                 0.018   eukaryotic translation initiation factor 5B 
ATRX                  0.018   transcriptional regulator ATRX isoform 2 
ATRX                  0.018   transcriptional regulator ATRX isoform 1 
WDR87                 0.018   NYD-SP11 protein 
LOC440243             0.018   PREDICTED: Putative golgin subfamily A member 6-lik...
GOLGA4                0.018   golgi autoantigen, golgin subfamily a, 4 
GOLGB1                0.018   golgi autoantigen, golgin subfamily b, macrogolgin ...
ZC3H13                0.018   zinc finger CCCH-type containing 13 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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