Guide to the Human Genome
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Name: PHLDB2 Sequence: fasta or formatted (1237aa) NCBI GI: 197313728
Description:

pleckstrin homology-like domain, family B, member 2 isoform b

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [1253aa] pleckstrin homology-like domain, family B, member 2 isoform a
alt prot [1253aa] pleckstrin homology-like domain, family B, member 2 isoform a
alt prot [1210aa] pleckstrin homology-like domain, family B, member 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         72           2
 C cysteine            1.0         12           1
 D aspartate           5.4         67           2
 E glutamate           9.4        116           3
 F phenylalanine       2.6         32           2
 G glycine             4.1         51           2
 H histidine           2.7         33           1
 I isoleucine          3.6         45           1
 K lysine              7.3         90           2
 L leucine             9.9        122           2
 M methionine          2.4         30           2
 N asparagine          4.1         51           2
 P proline             5.2         64           4
 Q glutamine           4.2         52           2
 R arginine            7.0         87           3
 S serine             13.1        162           4
 T threonine           5.2         64           2
 V valine              3.5         43           2
 W tryptophan          0.3          4           1
 Y tyrosine            3.2         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology-like domain, family B, member 2... 
PHLDB2                0.978   pleckstrin homology-like domain, family B, member 2 ...
PHLDB2                0.969   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.969   pleckstrin homology-like domain, family B, member 2...
PHLDB1                0.262   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.260   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.260   pleckstrin homology-like domain, family B, member 1 ...
PHLDB3                0.073   pleckstrin homology-like domain, family B, member 3...
EEA1                  0.017   early endosome antigen 1, 162kD 
MYH10                 0.017   myosin, heavy polypeptide 10, non-muscle 
GOLGA4                0.015   golgi autoantigen, golgin subfamily a, 4 
SLK                   0.014   serine/threonine kinase 2 
SBF2                  0.014   SET binding factor 2 
SBF1                  0.014   SET binding factor 1 
AKAP9                 0.013   A-kinase anchor protein 9 isoform 2 
ROCK1                 0.013   Rho-associated, coiled-coil containing protein kinase...
CLIP1                 0.013   restin isoform b 
CLIP1                 0.013   restin isoform a 
CEP250                0.013   centrosomal protein 2 
TPR                   0.013   nuclear pore complex-associated protein TPR 
MYH13                 0.012   myosin, heavy polypeptide 13, skeletal muscle [Homo...
KTN1                  0.012   kinectin 1 isoform a 
KTN1                  0.012   kinectin 1 isoform a 
PLEC1                 0.012   plectin 1 isoform 11 
PLEC1                 0.012   plectin 1 isoform 10 
PLEC1                 0.012   plectin 1 isoform 8 
PLEC1                 0.012   plectin 1 isoform 7 
PLEC1                 0.012   plectin 1 isoform 6 
PLEC1                 0.012   plectin 1 isoform 3 
PLEC1                 0.012   plectin 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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