Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BOP1 Sequence: fasta or formatted (746aa) NCBI GI: 21327667
Description:

block of proliferation 1

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         46           3
 C cysteine            1.6         12           1
 D aspartate           7.5         56           3
 E glutamate           6.7         50           3
 F phenylalanine       3.2         24           2
 G glycine             6.7         50           2
 H histidine           3.1         23           2
 I isoleucine          2.0         15           1
 K lysine              3.5         26           2
 L leucine            10.3         77           3
 M methionine          1.6         12           1
 N asparagine          1.7         13           1
 P proline             8.8         66           3
 Q glutamine           4.0         30           2
 R arginine            8.4         63           3
 S serine              7.9         59           2
 T threonine           3.8         28           2
 V valine              8.7         65           2
 W tryptophan          1.7         13           1
 Y tyrosine            2.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   block of proliferation 1 
LOC727967             0.864   PREDICTED: similar to block of proliferation 1 [Hom...
STRN                  0.021   striatin, calmodulin binding protein 
WDR18                 0.021   WD repeat domain 18 
WDR51A                0.020   WD repeat domain 51A isoform 2 
WDR51A                0.020   WD repeat domain 51A isoform 1 
STRN3                 0.020   nuclear autoantigen isoform 1 
STRN3                 0.020   nuclear autoantigen isoform 2 
WDR51B                0.019   WD repeat domain 51B 
KATNB1                0.019   katanin p80 subunit B 1 
STRN4                 0.019   zinedin isoform 2 
STRN4                 0.019   zinedin isoform 1 
PLRG1                 0.018   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
WDR51A                0.017   WD repeat domain 51A isoform 3 
NLE1                  0.017   Notchless gene homolog isoform a 
WDR5                  0.017   WD repeat domain 5 
WDR5                  0.017   WD repeat domain 5 
COPA                  0.015   coatomer protein complex, subunit alpha isoform 1 [...
COPA                  0.015   coatomer protein complex, subunit alpha isoform 2 [...
THOC6                 0.015   WD repeat domain 58 isoform 2 
THOC6                 0.015   WD repeat domain 58 isoform 1 
WDR5B                 0.015   WD repeat domain 5B 
WDR33                 0.014   WD repeat domain 33 isoform 1 
WDR27                 0.013   WD repeat domain 27 
PABPN1                0.013   poly(A) binding protein, nuclear 1 
TEP1                  0.013   telomerase-associated protein 1 
WDR48                 0.013   WD repeat domain 48 
THOC3                 0.013   THO complex 3 
FBXW7                 0.013   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.013   F-box and WD repeat domain containing 7 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press