THOC6 25559

Name: THOC6	Sequence: fasta or formatted (341aa)		NCBI GI: 31543164
Description: WD repeat domain 58 isoform 1		Referenced in: WD Repeat Proteins
Other entries for this name: alt prot [296aa] WD repeat domain 58 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 27 2 C cysteine 2.9 10 1 D aspartate 3.5 12 1 E glutamate 6.2 21 2 F phenylalanine 3.2 11 1 G glycine 7.9 27 3 H histidine 2.9 10 1 I isoleucine 3.2 11 1 K lysine 4.1 14 2 L leucine 12.0 41 3 M methionine 1.8 6 1 N asparagine 2.6 9 2 P proline 5.6 19 2 Q glutamine 5.0 17 2 R arginine 5.6 19 2 S serine 8.5 29 2 T threonine 5.9 20 2 V valine 6.7 23 2 W tryptophan 2.3 8 1 Y tyrosine 2.1 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 58 isoform 1 THOC6 0.831 WD repeat domain 58 isoform 2 WDR47 0.055 WD repeat domain 47 isoform 3 WDR47 0.055 WD repeat domain 47 isoform 1 WDR47 0.055 WD repeat domain 47 isoform 2 WDR3 0.046 WD repeat-containing protein 3 TLE2 0.045 transducin-like enhancer protein 2 isoform 2 WDR5 0.042 WD repeat domain 5 WDR5 0.042 WD repeat domain 5 KATNB1 0.040 katanin p80 subunit B 1 FBXW10 0.040 F-box and WD-40 domain protein 10 CDRT1 0.040 CMT1A duplicated region transcript 1 TLE2 0.039 transducin-like enhancer protein 2 isoform 3 TLE2 0.039 transducin-like enhancer protein 2 isoform 1 PAFAH1B1 0.037 platelet-activating factor acetylhydrolase, isoform I... WDR5B 0.036 WD repeat domain 5B BTRC 0.036 beta-transducin repeat containing protein isoform 2 [... BTRC 0.036 beta-transducin repeat containing protein isoform 1 ... FBXW11 0.036 F-box and WD repeat domain containing 11 isoform C [... TAF5L 0.036 PCAF associated factor 65 beta isoform a FBXW11 0.036 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.036 F-box and WD repeat domain containing 11 isoform B [... TLE1 0.036 transducin-like enhancer protein 1 SNRNP40 0.036 WD repeat domain 57 (U5 snRNP specific) TLE4 0.036 transducin-like enhancer protein 4 WDR86 0.034 WD repeat domain 86 TLE3 0.034 transducin-like enhancer protein 3 isoform b TLE3 0.034 transducin-like enhancer protein 3 isoform c TLE3 0.034 transducin-like enhancer protein 3 isoform a WSB2 0.034 WD SOCS-box protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.