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Search of human proteins with 212549561
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|212549561 ataxin 1-like [Homo sapiens]
(689 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|212549561 ataxin 1-like [Homo sapiens] 1391 0.0
gi|189491748 ataxin 1 [Homo sapiens] 258 1e-68
gi|51479158 ataxin 1 [Homo sapiens] 258 1e-68
gi|150170670 piccolo isoform 2 [Homo sapiens] 49 2e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 49 2e-05
gi|146134388 YLP motif containing 1 [Homo sapiens] 49 2e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 3e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 48 3e-05
gi|21361411 HMG-box transcription factor 1 [Homo sapiens] 46 1e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 46 1e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 46 1e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 46 1e-04
gi|189181750 human immunodeficiency virus type I enhancer bindin... 45 2e-04
gi|116089331 human immunodeficiency virus type I enhancer bindin... 45 2e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 2e-04
gi|112421108 capicua homolog [Homo sapiens] 44 5e-04
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 44 5e-04
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 44 7e-04
gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens] 43 9e-04
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens] 43 9e-04
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 43 0.001
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 0.001
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 42 0.001
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 42 0.001
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 42 0.001
gi|51468067 Sp5 transcription factor [Homo sapiens] 42 0.001
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 42 0.002
gi|18079216 CASK interacting protein 1 [Homo sapiens] 42 0.002
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 42 0.002
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 41 0.003
>gi|212549561 ataxin 1-like [Homo sapiens]
Length = 689
Score = 1391 bits (3600), Expect = 0.0
Identities = 689/689 (100%), Positives = 689/689 (100%)
Query: 1 MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGAR 60
MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGAR
Sbjct: 1 MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGAR 60
Query: 61 VSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP 120
VSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP
Sbjct: 61 VSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP 120
Query: 121 GIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASL 180
GIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASL
Sbjct: 121 GIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASL 180
Query: 181 LAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGY 240
LAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGY
Sbjct: 181 LAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGY 240
Query: 241 TLHETPPAGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLV 300
TLHETPPAGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLV
Sbjct: 241 TLHETPPAGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLV 300
Query: 301 PVVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKEEP 360
PVVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKEEP
Sbjct: 301 PVVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKEEP 360
Query: 361 SPLNLSHHTPDHQGEGRGSARNPAELAEKSQARGFYPQSHQEPVKHRPLPKAMVVANGNL 420
SPLNLSHHTPDHQGEGRGSARNPAELAEKSQARGFYPQSHQEPVKHRPLPKAMVVANGNL
Sbjct: 361 SPLNLSHHTPDHQGEGRGSARNPAELAEKSQARGFYPQSHQEPVKHRPLPKAMVVANGNL 420
Query: 421 VPTGTDSGLLPVGSEILVASSLDVQARATFPDKEPTPPPITSSHLPSHFMKGAIIQLATG 480
VPTGTDSGLLPVGSEILVASSLDVQARATFPDKEPTPPPITSSHLPSHFMKGAIIQLATG
Sbjct: 421 VPTGTDSGLLPVGSEILVASSLDVQARATFPDKEPTPPPITSSHLPSHFMKGAIIQLATG 480
Query: 481 ELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVP 540
ELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVP
Sbjct: 481 ELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVP 540
Query: 541 PEHPFFVYGQGWSSCSPGRTTQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCAPPSQ 600
PEHPFFVYGQGWSSCSPGRTTQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCAPPSQ
Sbjct: 541 PEHPFFVYGQGWSSCSPGRTTQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCAPPSQ 600
Query: 601 LGPPRERPERTVLGSRELCDSEGKSQPAGEGSRVVEPSQPESGAQACWPAPSFQRYSMQG 660
LGPPRERPERTVLGSRELCDSEGKSQPAGEGSRVVEPSQPESGAQACWPAPSFQRYSMQG
Sbjct: 601 LGPPRERPERTVLGSRELCDSEGKSQPAGEGSRVVEPSQPESGAQACWPAPSFQRYSMQG 660
Query: 661 EEARAALLRPSFIPQEVKLSIEGRSNAGK 689
EEARAALLRPSFIPQEVKLSIEGRSNAGK
Sbjct: 661 EEARAALLRPSFIPQEVKLSIEGRSNAGK 689
>gi|189491748 ataxin 1 [Homo sapiens]
Length = 815
Score = 258 bits (659), Expect = 1e-68
Identities = 250/851 (29%), Positives = 349/851 (41%), Gaps = 198/851 (23%)
Query: 1 MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGAR 60
MK ERS ECLPPKKR++P TS + + + W G G+ G R
Sbjct: 1 MKSNQERSNECLPPKKREIPATSRSSEEKAPTLPSDNHRVEGTAWLPGNP-GGRGHGGGR 59
Query: 61 VSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP 120
G E L + Q L+K +SP P V ++ P A+ P
Sbjct: 60 HGPAGTSVE----LGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLP----AAYATPQP 111
Query: 121 GIHYPPLHYAQLPSTSLQFIGSP-YSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYAS 179
G P+ YA LP T QFIGS YS YA +F+PS L+ P+AN TS A
Sbjct: 112 GTPVSPVQYAHLPHT-FQFIGSSQYSGTYA---SFIPSQLIPPTANPVTS--------AV 159
Query: 180 LLAEGATPPPQ-----------------APSPAHS------------------------- 197
A GAT P Q + +P H
Sbjct: 160 ASAAGATTPSQRSQLEAYSTLLANMGSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQ 219
Query: 198 -------FNKAPSATSPSGQLPH------HSSTQPLDL----APGRMPIYYQMSRLPAGY 240
++AP +P P H S+ P + +P +P++ + +
Sbjct: 220 QQQQQQHLSRAPGLITPGSPPPAQQNQYVHISSSPQNTGRTASPPAIPVHLHPHQTMIPH 279
Query: 241 TLHETPP-------AGASPVLTPQESQSALEAAAANGGQRPRE-RNLVRRESEALDSPNS 292
TL PP A + P+E+ E++ + +E N +S +P+S
Sbjct: 280 TLTLGPPSQVVMQYADSGSHFVPREATKKAESSRLQQAIQAKEVLNGEMEKSRRYGAPSS 339
Query: 293 KGEGQGL-----VP--------VVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQR 339
G G VP VV R V + TP DLEVQ+
Sbjct: 340 ADLGLGKAGGKSVPHPYESRHVVVHPSPSDYSSRDPSGVRASVMVLPNSNTPAADLEVQQ 399
Query: 340 VVGALASQDYRVVAAQRKEEPSPLN----LSHHTPDHQG---------EGRGSARNPAEL 386
A R+ PS LN L P H+ + SA P +
Sbjct: 400 -------------ATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPV 446
Query: 387 AEKSQARGFYPQSHQEPVKHRPLPKAMVVANGNL----VPTGTDSGLLPVGSEILVASSL 442
+ A FY + + + + + G+L V GT L+PVGS + AS
Sbjct: 447 GLPATA--FYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGSTDMEASGA 504
Query: 443 D------------------------------------------VQARATFPDKEPTPPPI 460
VQA+ P + P
Sbjct: 505 APAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPA 564
Query: 461 TSSH-LPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWP 519
+ LP +FMKG+IIQLA GELK+VEDL+T+DF++SAE+S LKIDSSTV I++S P
Sbjct: 565 AAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSP 624
Query: 520 GFVMLHFVVGEQQSKVSIEVPPEHPFFVYGQGWSSCSPGRTTQLFSLPCHRLQVGDVCIS 579
G ++ F VGE +++VS+EV E+PFFV+GQGWSSC P RT+QLF LPC +L VGDVCIS
Sbjct: 625 GVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCIS 684
Query: 580 ISLQSLNSNSVSQASCAPPSQ----------LGPPR----ERPERTVLGSRELCDSEGKS 625
++L++L + SV + P+ L R E+ GS ++ G+
Sbjct: 685 LTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGINQGSAQMLSENGEL 744
Query: 626 Q-------PAGEGSRVVEPSQPESGAQACWPAPSFQRYSMQGEEARAALLRPSFIPQEVK 678
+ PA +EPS+P + + W AP ++ +E L +PS IPQEVK
Sbjct: 745 KFPEKMGLPAAPFLTKIEPSKPAATRKRRWSAPESRKLEKSEDEPPLTLPKPSLIPQEVK 804
Query: 679 LSIEGRSNAGK 689
+ IEGRSN GK
Sbjct: 805 ICIEGRSNVGK 815
>gi|51479158 ataxin 1 [Homo sapiens]
Length = 815
Score = 258 bits (659), Expect = 1e-68
Identities = 250/851 (29%), Positives = 349/851 (41%), Gaps = 198/851 (23%)
Query: 1 MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGAR 60
MK ERS ECLPPKKR++P TS + + + W G G+ G R
Sbjct: 1 MKSNQERSNECLPPKKREIPATSRSSEEKAPTLPSDNHRVEGTAWLPGNP-GGRGHGGGR 59
Query: 61 VSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP 120
G E L + Q L+K +SP P V ++ P A+ P
Sbjct: 60 HGPAGTSVE----LGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLP----AAYATPQP 111
Query: 121 GIHYPPLHYAQLPSTSLQFIGSP-YSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYAS 179
G P+ YA LP T QFIGS YS YA +F+PS L+ P+AN TS A
Sbjct: 112 GTPVSPVQYAHLPHT-FQFIGSSQYSGTYA---SFIPSQLIPPTANPVTS--------AV 159
Query: 180 LLAEGATPPPQ-----------------APSPAHS------------------------- 197
A GAT P Q + +P H
Sbjct: 160 ASAAGATTPSQRSQLEAYSTLLANMGSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQ 219
Query: 198 -------FNKAPSATSPSGQLPH------HSSTQPLDL----APGRMPIYYQMSRLPAGY 240
++AP +P P H S+ P + +P +P++ + +
Sbjct: 220 QQQQQQHLSRAPGLITPGSPPPAQQNQYVHISSSPQNTGRTASPPAIPVHLHPHQTMIPH 279
Query: 241 TLHETPP-------AGASPVLTPQESQSALEAAAANGGQRPRE-RNLVRRESEALDSPNS 292
TL PP A + P+E+ E++ + +E N +S +P+S
Sbjct: 280 TLTLGPPSQVVMQYADSGSHFVPREATKKAESSRLQQAIQAKEVLNGEMEKSRRYGAPSS 339
Query: 293 KGEGQGL-----VP--------VVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQR 339
G G VP VV R V + TP DLEVQ+
Sbjct: 340 ADLGLGKAGGKSVPHPYESRHVVVHPSPSDYSSRDPSGVRASVMVLPNSNTPAADLEVQQ 399
Query: 340 VVGALASQDYRVVAAQRKEEPSPLN----LSHHTPDHQG---------EGRGSARNPAEL 386
A R+ PS LN L P H+ + SA P +
Sbjct: 400 -------------ATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPV 446
Query: 387 AEKSQARGFYPQSHQEPVKHRPLPKAMVVANGNL----VPTGTDSGLLPVGSEILVASSL 442
+ A FY + + + + + G+L V GT L+PVGS + AS
Sbjct: 447 GLPATA--FYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGSTDMEASGA 504
Query: 443 D------------------------------------------VQARATFPDKEPTPPPI 460
VQA+ P + P
Sbjct: 505 APAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPA 564
Query: 461 TSSH-LPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWP 519
+ LP +FMKG+IIQLA GELK+VEDL+T+DF++SAE+S LKIDSSTV I++S P
Sbjct: 565 AAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSP 624
Query: 520 GFVMLHFVVGEQQSKVSIEVPPEHPFFVYGQGWSSCSPGRTTQLFSLPCHRLQVGDVCIS 579
G ++ F VGE +++VS+EV E+PFFV+GQGWSSC P RT+QLF LPC +L VGDVCIS
Sbjct: 625 GVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCIS 684
Query: 580 ISLQSLNSNSVSQASCAPPSQ----------LGPPR----ERPERTVLGSRELCDSEGKS 625
++L++L + SV + P+ L R E+ GS ++ G+
Sbjct: 685 LTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGINQGSAQMLSENGEL 744
Query: 626 Q-------PAGEGSRVVEPSQPESGAQACWPAPSFQRYSMQGEEARAALLRPSFIPQEVK 678
+ PA +EPS+P + + W AP ++ +E L +PS IPQEVK
Sbjct: 745 KFPEKMGLPAAPFLTKIEPSKPAATRKRRWSAPESRKLEKSEDEPPLTLPKPSLIPQEVK 804
Query: 679 LSIEGRSNAGK 689
+ IEGRSN GK
Sbjct: 805 ICIEGRSNVGK 815
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 48.5 bits (114), Expect = 2e-05
Identities = 56/230 (24%), Positives = 77/230 (33%), Gaps = 20/230 (8%)
Query: 86 AVPPATFSPTGLPSVVNMSPL----PPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIG 141
A PPA + + PS P PP V + Q PG PP P Q G
Sbjct: 369 AKPPAQQTGSEKPSSEQPGPKALAQPP--GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG 426
Query: 142 --------SPYSLPYAVP-PNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAP 192
P P P P +P+ P A P P S L A PPPQ P
Sbjct: 427 LQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPP--SQLPGPAKPPPQQP 484
Query: 193 SPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASP 252
PA + P + P Q P + P P + S P P+ P
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 253 VLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLVPV 302
+Q + + + G +P + V S + P S+G + + P+
Sbjct: 545 SPAKPSAQQSTKPVSQTGSGKPLQPPTV---SPSAKQPPSQGLPKTICPL 591
Score = 32.0 bits (71), Expect = 2.0
Identities = 51/242 (21%), Positives = 80/242 (33%), Gaps = 18/242 (7%)
Query: 181 LAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMP--IYYQMSRLPA 238
+ G + P PSP+ + P+ P Q P H +QP P P + +++ P
Sbjct: 288 IVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPG 347
Query: 239 GYTLHETPPAGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQG 298
PP P P A A G ++P + +AL P G+
Sbjct: 348 TVKPPVQPPGTTKPPAQP--LGPAKPPAQQTGSEKPSSE---QPGPKALAQPPGVGKTPA 402
Query: 299 LVPVVECVVDGQLFSGSQTPRVE---VAAPAHRGTPDTDLEVQRVVGALASQDY---RVV 352
P Q+ G+ P + + +PA P Q G + +Q +
Sbjct: 403 QQPGPAKPPTQQV--GTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTS 460
Query: 353 AAQRKEEPSPLNL---SHHTPDHQGEGRGSARNPAELAEKSQARGFYPQSHQEPVKHRPL 409
A Q P L + P G + + P SQ G Q+P +P
Sbjct: 461 AQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPS 520
Query: 410 PK 411
P+
Sbjct: 521 PQ 522
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 48.5 bits (114), Expect = 2e-05
Identities = 56/230 (24%), Positives = 77/230 (33%), Gaps = 20/230 (8%)
Query: 86 AVPPATFSPTGLPSVVNMSPL----PPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIG 141
A PPA + + PS P PP V + Q PG PP P Q G
Sbjct: 369 AKPPAQQTGSEKPSSEQPGPKALAQPP--GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG 426
Query: 142 --------SPYSLPYAVP-PNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAP 192
P P P P +P+ P A P P S L A PPPQ P
Sbjct: 427 LQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPP--SQLPGPAKPPPQQP 484
Query: 193 SPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASP 252
PA + P + P Q P + P P + S P P+ P
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 253 VLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLVPV 302
+Q + + + G +P + V S + P S+G + + P+
Sbjct: 545 SPAKPSAQQSTKPVSQTGSGKPLQPPTV---SPSAKQPPSQGLPKTICPL 591
Score = 32.0 bits (71), Expect = 2.0
Identities = 51/242 (21%), Positives = 80/242 (33%), Gaps = 18/242 (7%)
Query: 181 LAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMP--IYYQMSRLPA 238
+ G + P PSP+ + P+ P Q P H +QP P P + +++ P
Sbjct: 288 IVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPG 347
Query: 239 GYTLHETPPAGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQG 298
PP P P A A G ++P + +AL P G+
Sbjct: 348 TVKPPVQPPGTTKPPAQP--LGPAKPPAQQTGSEKPSSE---QPGPKALAQPPGVGKTPA 402
Query: 299 LVPVVECVVDGQLFSGSQTPRVE---VAAPAHRGTPDTDLEVQRVVGALASQDY---RVV 352
P Q+ G+ P + + +PA P Q G + +Q +
Sbjct: 403 QQPGPAKPPTQQV--GTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTS 460
Query: 353 AAQRKEEPSPLNL---SHHTPDHQGEGRGSARNPAELAEKSQARGFYPQSHQEPVKHRPL 409
A Q P L + P G + + P SQ G Q+P +P
Sbjct: 461 AQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPS 520
Query: 410 PK 411
P+
Sbjct: 521 PQ 522
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 48.5 bits (114), Expect = 2e-05
Identities = 65/249 (26%), Positives = 97/249 (38%), Gaps = 33/249 (13%)
Query: 102 NMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLS 161
NMS +PP F S + PP+ LP + P +LP VPP +P P++
Sbjct: 513 NMS-MPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVM-----PPALPATVPPPGMPPPVMP 566
Query: 162 PS-----------ANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQ 210
PS +L+++ P +P SL + G PPP P P+ S + AP P
Sbjct: 567 PSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAG--PPPVLPPPSLS-STAPPPVMPLP- 622
Query: 211 LPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGAS-PVLTPQESQSALEAAAAN 269
P S+T P + P +P +P T PPA +S P++ + AL +
Sbjct: 623 -PLSSATPPPGIPPPGVP-----QGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVS 676
Query: 270 GGQRPRERNLVRRESEALDSPNSKGEGQGLVPVVECVVDGQLFSGSQTPRVEVAAPAHRG 329
G P L S + P+ + + FS Q AAP+
Sbjct: 677 FGSAP-----PTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPI 731
Query: 330 TPDTDLEVQ 338
T D+ V+
Sbjct: 732 TAVKDMPVR 740
Score = 40.8 bits (94), Expect = 0.004
Identities = 47/191 (24%), Positives = 70/191 (36%), Gaps = 28/191 (14%)
Query: 78 QYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSL 137
++ ML+ P P L S P+PP + S P PP +Y P++S
Sbjct: 124 KHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYP--PTSSQ 181
Query: 138 QFIGSPYSLPYAVPPN---FLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSP 194
++ P PP+ P+P S S++ + S+L H Y + P PS
Sbjct: 182 PYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSY----LPSSQASPSRPSQ 237
Query: 195 AHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASP-- 252
HS ++ + PS AP Q L +G T A+P
Sbjct: 238 GHSKSQLLAPPPPS--------------APPGNKTTVQQEPLESGAKNKSTEQQQAAPEP 283
Query: 253 ---VLTPQESQ 260
+TPQE Q
Sbjct: 284 DPSTMTPQEQQ 294
Score = 33.9 bits (76), Expect = 0.52
Identities = 61/270 (22%), Positives = 89/270 (32%), Gaps = 27/270 (10%)
Query: 151 PPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQ 210
PP +P L SP + + P S + PP P + P+ SPS
Sbjct: 135 PPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQS 194
Query: 211 LPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHE---TPPAGASPVLTPQESQSALEAAA 267
P S P P Y S Y H P + ASP Q + A
Sbjct: 195 PPSQSYLAP-------TPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAP 247
Query: 268 ANGGQRPRERNLVRRESEALDSPNSKGEGQGLVPVVE----CVVDGQLFSGSQ-----TP 318
P + V++E + N E Q P + + Q + Q
Sbjct: 248 PPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQ 307
Query: 319 RVEVAAPAHRGTP----DTDLEVQRVVGALASQDYRVVAAQRKEEPSPLNLSHHTPDHQG 374
R +V P H+ P DT V+ V A+ +V + EEP + P
Sbjct: 308 RTKVHLPGHKKGPVVAKDTPEPVKEEVTVPATS--QVPESPSSEEPPLPPPNEEVPPPLP 365
Query: 375 EGRGSARNPAELA--EKSQARGFYPQSHQE 402
+ +P E A ++ QA + Q HQ+
Sbjct: 366 PEEPQSEDPEEDARLKQLQAAAAHWQQHQQ 395
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/200 (28%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 85 VAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPY 144
+A+PP +P P+ +SPL A + + +H ++ PS +Q SP
Sbjct: 400 LALPPLQ-APPSPPASPPLSPLATPSPQAPNAL---AVHLLQAPFSPPPSPPVQAPFSPP 455
Query: 145 SLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAP-- 202
+ P V P+ P PS +P P + ++ ATPPPQAP P AP
Sbjct: 456 ASP-PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL----AAPPL 510
Query: 203 SATSPSGQLPHHSSTQPLDLA-------PGRMPIYYQMSRLPAGYTLHETPPAGASPVLT 255
P Q P +T PL PG+ P + + LP TPP A PVL
Sbjct: 511 QLAKPPPQAPPALATPPLQALPSPPASFPGQAP-FSPSASLPMSPL--ATPPPQAPPVLA 567
Query: 256 PQESQSALEAAAANGGQRPR 275
Q A+ Q PR
Sbjct: 568 APLLQVPPSPPASPTLQAPR 587
Score = 40.8 bits (94), Expect = 0.004
Identities = 54/197 (27%), Positives = 74/197 (37%), Gaps = 37/197 (18%)
Query: 86 AVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQ----FIG 141
A P ++ L + + ++P P+ + + P P L S +LQ F+
Sbjct: 323 ATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP 382
Query: 142 SPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAP--------- 192
SP P A PP P P+ L P P + L+ ATP PQAP
Sbjct: 383 SPPLSPLATPP-----PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 437
Query: 193 ---------------SPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLP 237
SP S +PSAT PS Q P + PL + P P MS P
Sbjct: 438 APFSPPPSPPVQAPFSPPASPPVSPSATPPS-QAPPSLAAPPLQVPPS-PPASPPMS--P 493
Query: 238 AGYTLHETPPAGASPVL 254
+ + PP A+P L
Sbjct: 494 SATPPPQAPPPLAAPPL 510
Score = 35.0 bits (79), Expect = 0.23
Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 19/132 (14%)
Query: 88 PPATFSPT--GLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYS 145
PPA +P LPS P F+ ++SL P PP L + LQ SP +
Sbjct: 520 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA 579
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSAT 205
P P P+P P +++ L LA G PPP +++PS+T
Sbjct: 580 SPTLQAPRRPPTP--GPDTSVSGPRL------TLALAPGPPPPP---------SRSPSST 622
Query: 206 SPSGQLPHHSST 217
L HSS+
Sbjct: 623 LSGPDLAGHSSS 634
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/200 (28%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 85 VAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPY 144
+A+PP +P P+ +SPL A + + +H ++ PS +Q SP
Sbjct: 361 LALPPLQ-APPSPPASPPLSPLATPSPQAPNAL---AVHLLQAPFSPPPSPPVQAPFSPP 416
Query: 145 SLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAP-- 202
+ P V P+ P PS +P P + ++ ATPPPQAP P AP
Sbjct: 417 ASP-PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL----AAPPL 471
Query: 203 SATSPSGQLPHHSSTQPLDLA-------PGRMPIYYQMSRLPAGYTLHETPPAGASPVLT 255
P Q P +T PL PG+ P + + LP TPP A PVL
Sbjct: 472 QLAKPPPQAPPALATPPLQALPSPPASFPGQAP-FSPSASLPMSPL--ATPPPQAPPVLA 528
Query: 256 PQESQSALEAAAANGGQRPR 275
Q A+ Q PR
Sbjct: 529 APLLQVPPSPPASPTLQAPR 548
Score = 43.5 bits (101), Expect = 7e-04
Identities = 62/203 (30%), Positives = 77/203 (37%), Gaps = 51/203 (25%)
Query: 86 AVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYS 145
A+ P + SP PS PP+ + SL P PP A PS + +GSP
Sbjct: 286 ALGPLSSSPLATPS----PSAPPSPSAPPSLQTLPS---PP---ATPPSQATTSLGSP-- 333
Query: 146 LPYAVPPNFLPSPLLSPSAN----------LATSHLPHFVPYASLLAEGATPPPQAP--- 192
+FLPSP LSP A L P P + L+ ATP PQAP
Sbjct: 334 -TLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNAL 392
Query: 193 ---------------------SPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYY 231
SP S +PSAT PS Q P + PL + P P
Sbjct: 393 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS-QAPPSLAAPPLQVPPS-PPASP 450
Query: 232 QMSRLPAGYTLHETPPAGASPVL 254
MS P+ + PP A+P L
Sbjct: 451 PMS--PSATPPPQAPPPLAAPPL 471
Score = 35.0 bits (79), Expect = 0.23
Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 19/132 (14%)
Query: 88 PPATFSPT--GLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYS 145
PPA +P LPS P F+ ++SL P PP L + LQ SP +
Sbjct: 481 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA 540
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSAT 205
P P P+P P +++ L LA G PPP +++PS+T
Sbjct: 541 SPTLQAPRRPPTP--GPDTSVSGPRL------TLALAPGPPPPP---------SRSPSST 583
Query: 206 SPSGQLPHHSST 217
L HSS+
Sbjct: 584 LSGPDLAGHSSS 595
>gi|21361411 HMG-box transcription factor 1 [Homo sapiens]
Length = 514
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 469 FMKGAIIQLATGELKRVEDLQTQDFVRSAE----------VSGGLKIDSSTVVDIQESQW 518
F+KG + G K +D++ DF R+ + G D ++ +ES
Sbjct: 215 FLKGTRLCFHKGSNKEWQDVE--DFARAEGCDNEEDLQMGIHKGYGSDGLKLLSHEESVS 272
Query: 519 PGFVMLHFVVGE---QQSKVSIEVPPEHPFFVYGQGWSSCSPGRTTQLFSLPCHRLQVGD 575
G +L + +++E +HPF+V +GWSS P T +PC + +GD
Sbjct: 273 FGESVLKLTFDPGTVEDGLLTVECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEVHIGD 332
Query: 576 VCI 578
VC+
Sbjct: 333 VCL 335
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 45.8 bits (107), Expect = 1e-04
Identities = 57/209 (27%), Positives = 72/209 (34%), Gaps = 45/209 (21%)
Query: 88 PPATFSPTGLPSVVNMSPLP----------PTFNVASSLIQHPGIHYPPLHYAQLPSTSL 137
P + +P G P + P P PT + A + Q P P H Q P+
Sbjct: 195 PAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP 254
Query: 138 QFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHL-----------PHFVPYASLLAEGAT 186
Q SP+ P+ P L S A SH PH + LL
Sbjct: 255 QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 314
Query: 187 PPPQAPSPAHSFNKAPSATSPSGQLPHHS----------------STQPLDLAPGRMPIY 230
P P P S +AP TSP+ PH S QPL AP MP
Sbjct: 315 PQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHI 374
Query: 231 -----YQMSRLPAGYTLHETPP--AGASP 252
+ +LPA H+ PP +G SP
Sbjct: 375 KPPPTTPIPQLPAPQA-HKHPPHLSGPSP 402
Score = 40.0 bits (92), Expect = 0.007
Identities = 42/170 (24%), Positives = 60/170 (35%), Gaps = 11/170 (6%)
Query: 105 PLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSA 164
PLPP + P P L Q G P+++ N P P L P +
Sbjct: 363 PLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS---PFSMNANLPPPPALKPLS 419
Query: 165 NLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAP 224
+L+T H P P L + P P +P+ ++ + P H T +AP
Sbjct: 420 SLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPAS---HPPTGLHQVAP 476
Query: 225 GRMPIYYQMSRLPAG---YTLHETPPAGASPVLTPQESQSALEAAAANGG 271
P + Q +P G T P P +Q AAA+GG
Sbjct: 477 --QPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGG 524
Score = 38.1 bits (87), Expect = 0.027
Identities = 62/253 (24%), Positives = 87/253 (34%), Gaps = 25/253 (9%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHY--PPLHYAQLPSTSLQFIGSPYS 145
PPA+ PTGL V +P PP QHP + PP+ PSTS G S
Sbjct: 462 PPASHPPTGLHQV---APQPP-------FAQHPFVPGGPPPITPPTCPSTSTPPAGPGTS 511
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLL-----AEGATPPPQAPSPAHSFNK 200
A PP + A ++ LP L E PPP++PSP +
Sbjct: 512 ---AQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVD 568
Query: 201 APSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQ 260
PS S S + H A R +Y+ AG L + E +
Sbjct: 569 TPSHASQSARFYKHLDRGYNSCA--RTDLYFMPL---AGSKLAKKREEAIEKAKREAEQK 623
Query: 261 SALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLVPVVECVVDGQLFSGSQTPRV 320
+ E ++ RER R + S +G + + G + + P
Sbjct: 624 AREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPT 683
Query: 321 EVAAPAHRGTPDT 333
+AA PDT
Sbjct: 684 TIAAVPPYIGPDT 696
Score = 33.1 bits (74), Expect = 0.88
Identities = 35/126 (27%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPG-IHYPPLHYAQLPSTSLQFIGSPYSL 146
PP P+ N+ P P ++S HP H PPL QL S SP
Sbjct: 394 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPL---QLMPQSQPLPSSPAQP 450
Query: 147 PYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATS 206
P LP P S P P+A PPP P S + P+
Sbjct: 451 PGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPGGPPPITPPTCPSTSTPPAGPG 509
Query: 207 PSGQLP 212
S Q P
Sbjct: 510 TSAQPP 515
Score = 30.4 bits (67), Expect = 5.7
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 15/99 (15%)
Query: 110 FNVASSLIQHPGIH-------YPPLHYAQL-PSTSL--QFIGSPYSLPYAVPPNFLPSPL 159
FNV QH IH PLH P L P+ + PP LP+PL
Sbjct: 866 FNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPL 925
Query: 160 LS--PSANLATSHLPHFVPYASLLAEGATPPPQAPSPAH 196
L P + H PY L GA PPP S AH
Sbjct: 926 LGQPPHEHEMLRHPVFGTPYPRDL-PGAIPPPM--SAAH 961
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 45.8 bits (107), Expect = 1e-04
Identities = 57/209 (27%), Positives = 72/209 (34%), Gaps = 45/209 (21%)
Query: 88 PPATFSPTGLPSVVNMSPLP----------PTFNVASSLIQHPGIHYPPLHYAQLPSTSL 137
P + +P G P + P P PT + A + Q P P H Q P+
Sbjct: 749 PAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP 808
Query: 138 QFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHL-----------PHFVPYASLLAEGAT 186
Q SP+ P+ P L S A SH PH + LL
Sbjct: 809 QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 868
Query: 187 PPPQAPSPAHSFNKAPSATSPSGQLPHHS----------------STQPLDLAPGRMPIY 230
P P P S +AP TSP+ PH S QPL AP MP
Sbjct: 869 PQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHI 928
Query: 231 -----YQMSRLPAGYTLHETPP--AGASP 252
+ +LPA H+ PP +G SP
Sbjct: 929 KPPPTTPIPQLPAPQA-HKHPPHLSGPSP 956
Score = 40.0 bits (92), Expect = 0.007
Identities = 42/170 (24%), Positives = 60/170 (35%), Gaps = 11/170 (6%)
Query: 105 PLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSA 164
PLPP + P P L Q G P+++ N P P L P +
Sbjct: 917 PLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS---PFSMNANLPPPPALKPLS 973
Query: 165 NLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAP 224
+L+T H P P L + P P +P+ ++ + P H T +AP
Sbjct: 974 SLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPAS---HPPTGLHQVAP 1030
Query: 225 GRMPIYYQMSRLPAG---YTLHETPPAGASPVLTPQESQSALEAAAANGG 271
P + Q +P G T P P +Q AAA+GG
Sbjct: 1031 --QPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGG 1078
Score = 38.1 bits (87), Expect = 0.027
Identities = 62/253 (24%), Positives = 87/253 (34%), Gaps = 25/253 (9%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHY--PPLHYAQLPSTSLQFIGSPYS 145
PPA+ PTGL V +P PP QHP + PP+ PSTS G S
Sbjct: 1016 PPASHPPTGLHQV---APQPP-------FAQHPFVPGGPPPITPPTCPSTSTPPAGPGTS 1065
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLL-----AEGATPPPQAPSPAHSFNK 200
A PP + A ++ LP L E PPP++PSP +
Sbjct: 1066 ---AQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVD 1122
Query: 201 APSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQ 260
PS S S + H A R +Y+ AG L + E +
Sbjct: 1123 TPSHASQSARFYKHLDRGYNSCA--RTDLYFMPL---AGSKLAKKREEAIEKAKREAEQK 1177
Query: 261 SALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLVPVVECVVDGQLFSGSQTPRV 320
+ E ++ RER R + S +G + + G + + P
Sbjct: 1178 AREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPT 1237
Query: 321 EVAAPAHRGTPDT 333
+AA PDT
Sbjct: 1238 TIAAVPPYIGPDT 1250
Score = 33.1 bits (74), Expect = 0.88
Identities = 35/126 (27%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPG-IHYPPLHYAQLPSTSLQFIGSPYSL 146
PP P+ N+ P P ++S HP H PPL QL S SP
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPL---QLMPQSQPLPSSPAQP 1004
Query: 147 PYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATS 206
P LP P S P P+A PPP P S + P+
Sbjct: 1005 PGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPGGPPPITPPTCPSTSTPPAGPG 1063
Query: 207 PSGQLP 212
S Q P
Sbjct: 1064 TSAQPP 1069
Score = 30.4 bits (67), Expect = 5.7
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 15/99 (15%)
Query: 110 FNVASSLIQHPGIH-------YPPLHYAQL-PSTSL--QFIGSPYSLPYAVPPNFLPSPL 159
FNV QH IH PLH P L P+ + PP LP+PL
Sbjct: 1420 FNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPL 1479
Query: 160 LS--PSANLATSHLPHFVPYASLLAEGATPPPQAPSPAH 196
L P + H PY L GA PPP S AH
Sbjct: 1480 LGQPPHEHEMLRHPVFGTPYPRDL-PGAIPPPM--SAAH 1515
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 45.8 bits (107), Expect = 1e-04
Identities = 57/209 (27%), Positives = 72/209 (34%), Gaps = 45/209 (21%)
Query: 88 PPATFSPTGLPSVVNMSPLP----------PTFNVASSLIQHPGIHYPPLHYAQLPSTSL 137
P + +P G P + P P PT + A + Q P P H Q P+
Sbjct: 749 PAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP 808
Query: 138 QFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHL-----------PHFVPYASLLAEGAT 186
Q SP+ P+ P L S A SH PH + LL
Sbjct: 809 QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 868
Query: 187 PPPQAPSPAHSFNKAPSATSPSGQLPHHS----------------STQPLDLAPGRMPIY 230
P P P S +AP TSP+ PH S QPL AP MP
Sbjct: 869 PQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHI 928
Query: 231 -----YQMSRLPAGYTLHETPP--AGASP 252
+ +LPA H+ PP +G SP
Sbjct: 929 KPPPTTPIPQLPAPQA-HKHPPHLSGPSP 956
Score = 40.0 bits (92), Expect = 0.007
Identities = 42/170 (24%), Positives = 60/170 (35%), Gaps = 11/170 (6%)
Query: 105 PLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSA 164
PLPP + P P L Q G P+++ N P P L P +
Sbjct: 917 PLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS---PFSMNANLPPPPALKPLS 973
Query: 165 NLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAP 224
+L+T H P P L + P P +P+ ++ + P H T +AP
Sbjct: 974 SLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPAS---HPPTGLHQVAP 1030
Query: 225 GRMPIYYQMSRLPAG---YTLHETPPAGASPVLTPQESQSALEAAAANGG 271
P + Q +P G T P P +Q AAA+GG
Sbjct: 1031 --QPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGG 1078
Score = 38.1 bits (87), Expect = 0.027
Identities = 62/253 (24%), Positives = 87/253 (34%), Gaps = 25/253 (9%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHY--PPLHYAQLPSTSLQFIGSPYS 145
PPA+ PTGL V +P PP QHP + PP+ PSTS G S
Sbjct: 1016 PPASHPPTGLHQV---APQPP-------FAQHPFVPGGPPPITPPTCPSTSTPPAGPGTS 1065
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLL-----AEGATPPPQAPSPAHSFNK 200
A PP + A ++ LP L E PPP++PSP +
Sbjct: 1066 ---AQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVD 1122
Query: 201 APSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQ 260
PS S S + H A R +Y+ AG L + E +
Sbjct: 1123 TPSHASQSARFYKHLDRGYNSCA--RTDLYFMPL---AGSKLAKKREEAIEKAKREAEQK 1177
Query: 261 SALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLVPVVECVVDGQLFSGSQTPRV 320
+ E ++ RER R + S +G + + G + + P
Sbjct: 1178 AREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPT 1237
Query: 321 EVAAPAHRGTPDT 333
+AA PDT
Sbjct: 1238 TIAAVPPYIGPDT 1250
Score = 33.1 bits (74), Expect = 0.88
Identities = 35/126 (27%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPG-IHYPPLHYAQLPSTSLQFIGSPYSL 146
PP P+ N+ P P ++S HP H PPL QL S SP
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPL---QLMPQSQPLPSSPAQP 1004
Query: 147 PYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATS 206
P LP P S P P+A PPP P S + P+
Sbjct: 1005 PGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPGGPPPITPPTCPSTSTPPAGPG 1063
Query: 207 PSGQLP 212
S Q P
Sbjct: 1064 TSAQPP 1069
Score = 30.4 bits (67), Expect = 5.7
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 15/99 (15%)
Query: 110 FNVASSLIQHPGIH-------YPPLHYAQL-PSTSL--QFIGSPYSLPYAVPPNFLPSPL 159
FNV QH IH PLH P L P+ + PP LP+PL
Sbjct: 1420 FNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPL 1479
Query: 160 LS--PSANLATSHLPHFVPYASLLAEGATPPPQAPSPAH 196
L P + H PY L GA PPP S AH
Sbjct: 1480 LGQPPHEHEMLRHPVFGTPYPRDL-PGAIPPPM--SAAH 1515
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 45.4 bits (106), Expect = 2e-04
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 97 LPSVVNMSPLPPTFNVASSLIQHPGIHYP-PLHYAQLPSTSLQFIGSPYSLPYAVPPNFL 155
L S +M PLPP+ A L P + +P LH QL + P ++P+ PP+FL
Sbjct: 1172 LSSPYSMPPLPPSLFQAPPLPLQPTVLHPGQLHLPQL-------MPHPANIPFRQPPSFL 1224
Query: 156 PSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHS 215
P P P+++ +S F+P S A ++ P + AP AT +G P
Sbjct: 1225 PMPY--PTSSALSSGF--FLPLQSQFALQLPGDVESHLPQIKTSLAPLATGSAGLSPSTE 1280
Query: 216 STQPLDLAPGRMP 228
+ + L P P
Sbjct: 1281 YSSDIRLPPVAPP 1293
Score = 31.6 bits (70), Expect = 2.6
Identities = 41/152 (26%), Positives = 54/152 (35%), Gaps = 13/152 (8%)
Query: 120 PGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVP--- 176
PG PPL + +LQ P + +LP P+ S H P P
Sbjct: 1104 PGQDRPPLGPTVPYTEALQVFHHPVAQTPLHEKPYLPPPVSLFSFQHLVQHEPGQSPEFF 1163
Query: 177 ----YASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQ 232
+SLL+ + PP PS F P P+ P L P +P
Sbjct: 1164 STQAMSSLLSSPYSMPPLPPS---LFQAPPLPLQPTVLHPGQLHLPQLMPHPANIPFRQP 1220
Query: 233 MSRLPAGYTLHETPPAGASPVLTPQESQSALE 264
S LP Y T A +S P +SQ AL+
Sbjct: 1221 PSFLPMPY---PTSSALSSGFFLPLQSQFALQ 1249
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 45.4 bits (106), Expect = 2e-04
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 97 LPSVVNMSPLPPTFNVASSLIQHPGIHYP-PLHYAQLPSTSLQFIGSPYSLPYAVPPNFL 155
L S +M PLPP+ A L P + +P LH QL + P ++P+ PP+FL
Sbjct: 1172 LSSPYSMPPLPPSLFQAPPLPLQPTVLHPGQLHLPQL-------MPHPANIPFRQPPSFL 1224
Query: 156 PSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHS 215
P P P+++ +S F+P S A ++ P + AP AT +G P
Sbjct: 1225 PMPY--PTSSALSSGF--FLPLQSQFALQLPGDVESHLPQIKTSLAPLATGSAGLSPSTE 1280
Query: 216 STQPLDLAPGRMP 228
+ + L P P
Sbjct: 1281 YSSDIRLPPVAPP 1293
Score = 31.6 bits (70), Expect = 2.6
Identities = 41/152 (26%), Positives = 54/152 (35%), Gaps = 13/152 (8%)
Query: 120 PGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVP--- 176
PG PPL + +LQ P + +LP P+ S H P P
Sbjct: 1104 PGQDRPPLGPTVPYTEALQVFHHPVAQTPLHEKPYLPPPVSLFSFQHLVQHEPGQSPEFF 1163
Query: 177 ----YASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQ 232
+SLL+ + PP PS F P P+ P L P +P
Sbjct: 1164 STQAMSSLLSSPYSMPPLPPS---LFQAPPLPLQPTVLHPGQLHLPQLMPHPANIPFRQP 1220
Query: 233 MSRLPAGYTLHETPPAGASPVLTPQESQSALE 264
S LP Y T A +S P +SQ AL+
Sbjct: 1221 PSFLPMPY---PTSSALSSGFFLPLQSQFALQ 1249
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.1 bits (105), Expect = 2e-04
Identities = 63/209 (30%), Positives = 77/209 (36%), Gaps = 44/209 (21%)
Query: 88 PP--ATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYS 145
PP A FSP P V + S PP+ P + PPL P S P
Sbjct: 671 PPVQAPFSPPASPPV-SPSATPPSQ-------APPSLAAPPLQVPPSPPAS------PPM 716
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPP-----------QA-PS 193
P A PP P PL +P + P P + ++ ATPPP Q PS
Sbjct: 717 SPSATPPPQAPPPLAAPPLQV-----PPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 194 PAHSFNKAPSATSPSGQLPHHSSTQPLDLA-------PGRMPIYYQMSRLPAGYTLHETP 246
P S +P A P Q P +T PL PG+ P + + LP TP
Sbjct: 772 PPASLPMSPLA-KPPPQAPPALATPPLQALPSPPASFPGQAP-FSPSASLPMSPL--ATP 827
Query: 247 PAGASPVLTPQESQSALEAAAANGGQRPR 275
P A PVL Q A+ Q PR
Sbjct: 828 PPQAPPVLAAPLLQVPPSPPASPTLQAPR 856
Score = 42.7 bits (99), Expect = 0.001
Identities = 64/206 (31%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 86 AVPP--ATFSPTGLP--SVVNMSPLPPTFNVASSLIQHP--GIHYPPLH-YAQLPSTSLQ 138
A PP + SP P S + + PL ++AS Q P + PPL + L SLQ
Sbjct: 465 ASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQ 524
Query: 139 FIGSPYSL---PYAVPPNFLPSPLLSPSANLATSHL-----PHFVPYASLLAEGATPPPQ 190
P SL P P+ P PL + SA L T HL P P + + TPPP+
Sbjct: 525 T--PPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPE 582
Query: 191 APSPAHS--FNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPA 248
PS + P+ SP Q PL P + P + L A + +PP
Sbjct: 583 TPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPP- 641
Query: 249 GASPVLTPQESQSALEAAAANGGQRP 274
SP+ TP S A A A + Q P
Sbjct: 642 -LSPLATP--SPQAPNALAVHLLQAP 664
Score = 42.7 bits (99), Expect = 0.001
Identities = 60/206 (29%), Positives = 71/206 (34%), Gaps = 37/206 (17%)
Query: 94 PTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPN 153
P P SPL S I P PP L S LQ + SP P A PP
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPA----LASPPLQGLPSPPLSPLATPP- 618
Query: 154 FLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAP--------------------- 192
P P L P P + L+ ATP PQAP
Sbjct: 619 ----PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 674
Query: 193 ---SPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAG 249
SP S +PSAT PS Q P + PL + P P MS P+ + PP
Sbjct: 675 APFSPPASPPVSPSATPPS-QAPPSLAAPPLQVPPS-PPASPPMS--PSATPPPQAPPPL 730
Query: 250 ASPVLTPQESQSALEAAAANGGQRPR 275
A+P L S A + + PR
Sbjct: 731 AAPPLQVPPSPPASPPMSPSATPPPR 756
Score = 40.0 bits (92), Expect = 0.007
Identities = 43/143 (30%), Positives = 52/143 (36%), Gaps = 34/143 (23%)
Query: 86 AVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYS 145
A PP P + + P PP +SL P PP L + LQ + SP
Sbjct: 751 ATPPPRVPPLLAAPPLQVPPSPP-----ASLPMSPLAKPPPQAPPALATPPLQALPSP-- 803
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSAT 205
P +F SPSA+L S L ATPPPQAP P
Sbjct: 804 -----PASFPGQAPFSPSASLPMSPL-------------ATPPPQAP---------PVLA 836
Query: 206 SPSGQLPHHSSTQPLDLAPGRMP 228
+P Q+P P AP R P
Sbjct: 837 APLLQVPPSPPASPTLQAPRRPP 859
Score = 37.7 bits (86), Expect = 0.036
Identities = 56/197 (28%), Positives = 78/197 (39%), Gaps = 31/197 (15%)
Query: 85 VAVPPATFSPT--GLPSVVNMSPLPPTFNVASSLIQ--HPGIHYPPLH-YAQLPSTSLQF 139
+ VP + SP+ PS + +S L T ++ S +Q H + P A L S S
Sbjct: 389 IQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPA 448
Query: 140 --------IGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQA 191
+ +P SLP + P SP +SP ++ T H L+ A+ PQA
Sbjct: 449 STPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIH------PLQALSSLASHSPQA 502
Query: 192 PSPA---HSFNKAPSATSPSGQLPHHS-STQPLDLAPGRMPIYYQMSRLPAGYTLHETPP 247
P + S PS Q P S +T PL+ P P Q + P ETPP
Sbjct: 503 PLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPP 562
Query: 248 AGA--------SPVLTP 256
A SP+ TP
Sbjct: 563 CPAPCPLQAPPSPLTTP 579
Score = 36.2 bits (82), Expect = 0.10
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 21/133 (15%)
Query: 85 VAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPY 144
+A PP P+ S +P P+ ++ S + P PP+ A L LQ SP
Sbjct: 792 LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL----LQVPPSPP 847
Query: 145 SLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSA 204
+ P P P+P P +++ L LA G PPP +++PS+
Sbjct: 848 ASPTLQAPRRPPTP--GPDTSVSGPRL------TLALAPGPPPPP---------SRSPSS 890
Query: 205 TSPSGQLPHHSST 217
T L HSS+
Sbjct: 891 TLSGPDLAGHSSS 903
Score = 31.2 bits (69), Expect = 3.3
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 140 IGSPYSLPYAVP-PNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSF 198
+G S P A P P+ + + P N AT LP +P + LA P +PS S
Sbjct: 296 LGPLSSSPLATPSPSGTKARPVPPPDNAATP-LPATLPPSPPLATPLPLAPPSPSAPPSL 354
Query: 199 NKAPS-ATSPSGQLPHHSSTQPLDLAPGRMPI 229
PS +P Q P +T P+ P I
Sbjct: 355 QTLPSPPATPPSQAPPSMTTPPMQAPPSLQTI 386
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 43.9 bits (102), Expect = 5e-04
Identities = 65/235 (27%), Positives = 93/235 (39%), Gaps = 42/235 (17%)
Query: 54 QSQAGARVSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVA 113
QS G + LG A + G TV YG VA+ + P+G P+ V P +
Sbjct: 1008 QSAGGHALPLGTSPASSQAG-TVTSYGPTSSVALGFTSLGPSG-PAFVQ-----PLLSAG 1060
Query: 114 SSLIQHPG-IHYPPLHYAQLPSTSLQ---------FIGSPY---SLPYAVPPNFLPSPLL 160
+ + PG + P+ QLP + GSP S P A P PS +
Sbjct: 1061 QAPLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVY 1120
Query: 161 SPSANLATSHLPHFVPYASLLAEG------ATPPPQAPSP-AHSFNKAPSATSPSGQLPH 213
+ +ATS P P A++L +G ATP P +P P A + + S +P Q P
Sbjct: 1121 T----VATSTTP---PAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPS 1173
Query: 214 HSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETP----PAGASPVLTPQESQSALE 264
+ Q + A +P+ AG + P P PV P +S LE
Sbjct: 1174 PKAPQKVKAAIASIPV----GSFEAGASGRPGPAPRQPLEPGPVREPTAPESELE 1224
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 43.9 bits (102), Expect = 5e-04
Identities = 59/230 (25%), Positives = 88/230 (38%), Gaps = 48/230 (20%)
Query: 86 AVPPATFSPT----GLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLP---STSLQ 138
A PP PT G P ++ P PP+ + A + PG +PP +P S+S +
Sbjct: 145 ARPPCRVPPTTPLNGGPG--SLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPR 202
Query: 139 FIGSPYSLPYAVPP-------------------NFLPSPLLSPSANLATSHLPHFVPYAS 179
F+ + A PP + +PS L SP A A+S P P
Sbjct: 203 FLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPLFH 262
Query: 180 LLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDL------------APGRM 227
++ TPPP PS N P+ P+ Q P S+T L L PG
Sbjct: 263 -CSDALTPPPLPPS-----NNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGAP 316
Query: 228 PIYYQMSRLPAGYTLHETPPAGASPVLTPQESQSALEAAAANGGQRPRER 277
P + S L + + PP L + ++ +A+ + RP +R
Sbjct: 317 P--FLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQR 364
Score = 43.5 bits (101), Expect = 7e-04
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 36/178 (20%)
Query: 88 PPATFSPTGLPSVVNMS------PLPPTFNVASSLIQHPG-IHYPPLHYA--QLPSTSLQ 138
P A+ SP P + + S PLPP+ N+ + HPG PP+ A LP
Sbjct: 248 PHASSSPPSDPPLFHCSDALTPPPLPPSNNLPA----HPGPASQPPVSSATMHLPLVLGP 303
Query: 139 FIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSF 198
G+P PP FL S LLS +A LP P ++L +G P QAPS +HS
Sbjct: 304 LGGAPTVEGPGAPP-FLASSLLSAAAKAQHPPLP---PPSTL--QGRRPRAQAPSASHS- 356
Query: 199 NKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTP 256
SS +P P R P +++ T + P +PV P
Sbjct: 357 ----------------SSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQP 398
Score = 32.7 bits (73), Expect = 1.2
Identities = 37/117 (31%), Positives = 46/117 (39%), Gaps = 6/117 (5%)
Query: 88 PPATFSPT-GLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSL 146
PP SP G + ++S L + SL+Q PG PL QL L G+P L
Sbjct: 732 PPQLLSPLLGASLLGDLSSLTSSPGALPSLLQPPG----PLLSGQLGLQLLPGGGAPPPL 787
Query: 147 PYAVPP-NFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAP 202
A P L L P LP P ++L E A PP A +P H P
Sbjct: 788 SEASSPLACLLQSLQIPPEQPEAPCLPPESPASALEPEPARPPLSALAPPHGSPDPP 844
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
[Homo sapiens]
Length = 1636
Score = 43.5 bits (101), Expect = 7e-04
Identities = 58/221 (26%), Positives = 80/221 (36%), Gaps = 42/221 (19%)
Query: 65 GDGAEAITGLTVDQYGMLYKVAVP--PATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGI 122
GD E + L D VA P P TF + P SP P + PG
Sbjct: 739 GDPPEELRSLPPDM------VAGPRLPDTFLGSATPLHFPPSPFPSSTG--------PGP 784
Query: 123 HY-----PPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLP-HFVP 176
HY PP Y+ P+++P A P P+P +P L P H V
Sbjct: 785 HYLSGPLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVV 844
Query: 177 YASLLAEGATPP----PQAPSPAHSFNKAPSATSPS--------GQLPHHSSTQPLDLAP 224
+ + G PP P AP P S + A P+ +P H++ +P + P
Sbjct: 845 SSPYVGVGPAPPVAGLPSAPPPQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRP-NPTP 903
Query: 225 GRMPIYYQM---SRLPAGYTLHETPPAGASPVLTPQESQSA 262
P + + LP YT PAGA + Q S+
Sbjct: 904 APPPPCFPVPPPQPLPTPYTY----PAGAKQPIPAQHHFSS 940
Score = 32.0 bits (71), Expect = 2.0
Identities = 54/196 (27%), Positives = 69/196 (35%), Gaps = 29/196 (14%)
Query: 86 AVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYS 145
+ PP FS L V P T V S IQ P P H A P+ + +
Sbjct: 862 SAPPPQFSGPELAMAVR----PATTTVDS--IQAP----IPSHTAPRPNPTPAPPPPCFP 911
Query: 146 LPYAVPPNFLPSPLLSPSANL----ATSHLPHFVPYASLLAEGATPPPQA---PSPAHSF 198
+P PP LP+P P+ A H +P A A P PQ P P+ +F
Sbjct: 912 VP---PPQPLPTPYTYPAGAKQPIPAQHHFSSGIP-AGFPAPRIGPQPQPHPQPHPSQAF 967
Query: 199 NKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQE 258
P Q PH Q APG +P P L + PP P+ T
Sbjct: 968 GPQPPQQPLPLQHPHLFPPQ----APGLLPPQSPYPYAPQPGVLGQPPP----PLHTQLY 1019
Query: 259 SQSALEAAAANGGQRP 274
A + A+ G P
Sbjct: 1020 PGPAQDPLPAHSGALP 1035
Score = 32.0 bits (71), Expect = 2.0
Identities = 50/202 (24%), Positives = 71/202 (35%), Gaps = 51/202 (25%)
Query: 117 IQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVP 176
+QHP + +PP LP S PY PYA P L P L +P
Sbjct: 978 LQHPHL-FPPQAPGLLPPQS------PY--PYAPQPGVLGQPPPPLHTQLYPGPAQDPLP 1028
Query: 177 -YASLLAEGATPPPQAPSPAHSFNKAPS--------------ATSPSGQ---LPHHSSTQ 218
++ L + PPQ P P ++ APS S +GQ PH +
Sbjct: 1029 AHSGALPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSP 1088
Query: 219 PLDLAPGRMPIYYQMSRLP--------AGYTLHETP---------PAGASPVLTPQESQS 261
PG +P + P A L +P P G P+L P + +
Sbjct: 1089 APSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGTQSPGGGQPLLQPTKVDA 1148
Query: 262 ALEAAAANGGQRPRERNLVRRE 283
A G+RP+ L+ R+
Sbjct: 1149 A-------EGRRPQALRLIERD 1163
>gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens]
Length = 452
Score = 43.1 bits (100), Expect = 9e-04
Identities = 66/290 (22%), Positives = 107/290 (36%), Gaps = 59/290 (20%)
Query: 2 KPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGARV 61
+P E + LP + P+T G T ++ P S + + G+
Sbjct: 205 RPFEEGKKISLPGQMAGTPITPLKDGFTEVQLSSVNPPSLSPPGTTGI------------ 252
Query: 62 SLGGDGAEAITGLTVDQYGMLYKVAVPPATFS--PTGLPSVVNMSPLP-------PTFNV 112
+++TGL++ + PPA S TG+P+V + P P N
Sbjct: 253 ------EQSLTGLSIS--------STPPAVSSVLSTGVPTVPLLPPQVNQSLTSVPPMNP 298
Query: 113 ASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLP 172
A++L PG+ P LP+ +L + +P+ +P P L +P L P ++ +LP
Sbjct: 299 ATTL---PGLMPLPAGLPNLPNLNLN-LPAPHIMPGVGLPE-LVNPGLPPLPSMPPRNLP 353
Query: 173 HFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQ 232
P P P P+ S+ + SG+L SS P AP
Sbjct: 354 GIAPL---------PLPSEFLPSFPLVPESSSAASSGELL--SSLPPTSNAPSDPATTTA 402
Query: 233 MSRLPAGYTLHETPPAGASPVL--------TPQESQSALEAAAANGGQRP 274
+ + T+ TPP +P TP + A AN + P
Sbjct: 403 KADAASSLTVDVTPPTAKAPTTVEDRVGDSTPVSEKPVSAAVDANASESP 452
>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
Length = 1426
Score = 43.1 bits (100), Expect = 9e-04
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 20/153 (13%)
Query: 87 VPPATFSPTGLPSVVNMSP--------LPPTFNVASSLIQHPGIH---YPPLHYAQLPST 135
+PP +P+ P+ +N +P P +VA S + PGI+ P +H Q P
Sbjct: 817 MPPLPLNPSSNPTSLNTAPPVQRGLGRKPLDISVAGSQVHSPGINPLKSPTMHQVQSP-- 874
Query: 136 SLQFIGSPY-SLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSP 194
+GSP +L P+ L L P+A + P A+ +P APSP
Sbjct: 875 ---MLGSPSGNLKSPQTPSQLAGMLAGPAAAASIKSPPVLGSAAASPVHLKSPSLPAPSP 931
Query: 195 AHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRM 227
+ + P SP G P+H + PL +A M
Sbjct: 932 GWTSSPKPPLQSP-GIPPNHKA--PLTMASPAM 961
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 42.7 bits (99), Expect = 0.001
Identities = 59/226 (26%), Positives = 79/226 (34%), Gaps = 38/226 (16%)
Query: 98 PSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPS 157
P SP PP L +H PP ++ PS+S +G P P +
Sbjct: 936 PQAAQPSPAPPGARGGLGLPEH---FLPPPPSSRSPSSSPGQLGQP---PGELSLGLATG 989
Query: 158 PLLSPSANLATSHLPHFVPYASLLAE--------GATPPPQAPSPAHSFNKAPSATSPSG 209
PL +P P V AS A G +PP +P P +F AP S S
Sbjct: 990 PLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGS- 1048
Query: 210 QLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQSALEAAAAN 269
H S L L P P Q+ P +P LTP L+ +A+
Sbjct: 1049 ----HGS---LLLPPASSPPPPQV------------PQRRGTPPLTPGRLTQDLKLISAS 1089
Query: 270 GGQRPRERNLVRRESEALDSPNSKGEGQGLVPVVECVVDGQLFSGS 315
P++ R + SP+S GE P+ G SGS
Sbjct: 1090 QPALPQDGAQTLRRA----SPHSSGESMAAFPLFPRAGGGSGGSGS 1131
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.7 bits (99), Expect = 0.001
Identities = 87/352 (24%), Positives = 123/352 (34%), Gaps = 71/352 (20%)
Query: 128 HYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATP 187
H+A P+ SL G P LP P P+A P FV A+ A A
Sbjct: 208 HHAAAPAVSLVNNG---------PAALLPLP--KPAAPGTVIQTPPFVGAAAPPAPAAPS 256
Query: 188 PPQAPSPAHSFNKAPSATSPS--------GQLPHHSSTQPLDLAPGRMPIYYQMSRLPAG 239
PP AP+PA AP+A P + P H + P AP P + AG
Sbjct: 257 PPAAPAPA-----APAAAPPPPPPAPATLARPPGHPAGPP-TAAPAVPPPAAAQNGGSAG 310
Query: 240 YTLHETPPAGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGL 299
P AG ++ Q A AA A G + + +V+ A + + G
Sbjct: 311 AAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAS-- 368
Query: 300 VPVVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKEE 359
+V G G+ V PA GTP T L + GA+ R
Sbjct: 369 --TAASMVIGPTMQGALPSPAAVPPPA-PGTP-TGLP-KGAAGAVTQSLSR--------- 414
Query: 360 PSPLNLSHHTPDHQGEGRGSARNPAELAEKSQARGFYPQSHQEP--VKHRPLPKAMVVA- 416
TP G + P LA + PQ Q P +++ LP MV+
Sbjct: 415 ---------TPTATTSGIRATLTPTVLAPR------LPQPPQNPTNIQNFQLPPGMVLVR 459
Query: 417 --NGNLVPTGTDSGLLPVGSEILVASSLDVQARATFPDKEPTP---PPITSS 463
NG L+ ++P + + + Q + T + TP PP+ S
Sbjct: 460 SENGQLL-------MIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQIS 504
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 42.4 bits (98), Expect = 0.001
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 21/206 (10%)
Query: 89 PATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPP--LHYAQLPSTSLQFIGSPYSL 146
P+ SPTG+PS +++ + T ++ +L + PP P SL + S +L
Sbjct: 188 PSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRASLSMMPST-AL 246
Query: 147 PYAVPPNFLPSPLLSPSANL---ATSHLPHFVPYASLLAEGATPP----PQAPSPAHSFN 199
PP P+ +LS ++ +T+ + S + TP PS A
Sbjct: 247 LIRTPPRASPTGMLSRTSLTKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMR 306
Query: 200 KAPSATSPSGQLPHHS-----STQPLDLAPGRMPIYYQMSRL-PAGYTLHETP---PAGA 250
P A SP+G L S ST + P R I SR P G +P P+ A
Sbjct: 307 MLPRA-SPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPSRA 365
Query: 251 SPVLTPQ-ESQSALEAAAANGGQRPR 275
SP +P S + L + A+ G PR
Sbjct: 366 SPTGSPSTASLTGLSSTASPTGTPPR 391
Score = 39.7 bits (91), Expect = 0.009
Identities = 59/251 (23%), Positives = 91/251 (36%), Gaps = 40/251 (15%)
Query: 72 TGLT-VDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQ-HPGIHYPPLHY 129
T LT +D + + P+T SPTG PS ++S P T ++ L + P
Sbjct: 263 TSLTKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSL 322
Query: 130 AQLPSTS-------------LQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVP 176
++ ST+ SP P P PS SP+ + +T+ L
Sbjct: 323 TKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPS-RASPTGSPSTASL---TG 378
Query: 177 YASLLAEGATPPPQAPS---PAHSFNKAPSATSPSGQLPHHSSTQ------PLDLAPGRM 227
+S + TPP +P+ S + P SP+G L S T+ P P
Sbjct: 379 LSSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRAS 438
Query: 228 PIYYQMSRLPAGYTLHETP------------PAGASPVLTPQESQSALEAAAANGGQRPR 275
P P G +P P+ ASP +P + + A+ + P
Sbjct: 439 PTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLTRTPS 498
Query: 276 ERNLVRRESEA 286
+L + ES A
Sbjct: 499 RASLTKMESTA 509
Score = 39.7 bits (91), Expect = 0.009
Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 23/196 (11%)
Query: 89 PATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPY 148
P+T SPTG PS + + P +SL + P ++ T ++ S P
Sbjct: 470 PSTASPTGSPSTASPTGSPSR----ASLTRTP---------SRASLTKMESTASITRTPS 516
Query: 149 AVPPNFLPS---PLLSPSANLATSH-----LPHFVPYASLLAEGATPPPQAPSPAHSFNK 200
P + PS P SPS LA L ASL + PS A S +
Sbjct: 517 RASPTWTPSTASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRA-SLTR 575
Query: 201 APSATSPSGQLPHHSST-QPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQES 259
PS + P S T P +P MP ++++ + ++ TPP + P+ S
Sbjct: 576 TPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRAS 635
Query: 260 QSALEAAAANGGQRPR 275
+ A+ G PR
Sbjct: 636 PTGTPPRASPTGTPPR 651
Score = 36.2 bits (82), Expect = 0.10
Identities = 47/197 (23%), Positives = 73/197 (37%), Gaps = 25/197 (12%)
Query: 89 PATFSPTGLPSVVNMSPLPPTFNVA-----SSLIQHPGIHYPPLHYAQL-----PSTSLQ 138
P+T SPTG PS +++ P ++ +S+ + P P + PST+L
Sbjct: 479 PSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASPTGSPSTALA 538
Query: 139 FIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSF 198
+GSP P+ A+L T S + PP +P+
Sbjct: 539 -MGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLTRMPPSASPTGM--- 594
Query: 199 NKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQE 258
PS TSP+G P +M ++R P + ETPP + P+
Sbjct: 595 ---PSRTSPTGM--------PSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPPRA 643
Query: 259 SQSALEAAAANGGQRPR 275
S + A+ G PR
Sbjct: 644 SPTGTPPRASPTGTPPR 660
Score = 30.8 bits (68), Expect = 4.4
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 19/205 (9%)
Query: 89 PATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPY 148
P+T S TG PS +++ P T ++ + + PP + ++ + SP
Sbjct: 17 PSTASLTGTPSRASLTGTPSTASLMGTPSRASLTGTPPRASLKGTTSMASLMVSP---SR 73
Query: 149 AVPPNFLPSPLLSPSANLAT-SHLP------HFVPYASLLAEGATPPPQAPSPAHSFNKA 201
A S LL+ + ++A+ +P +P ASL+ P S S ++A
Sbjct: 74 ASLTRMQSSSLLTRTPSMASLKRMPPRASRTRTLPRASLMRR-----PSTASLTRSPSRA 128
Query: 202 PSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQS 261
T+PS S P A MP ++R P +L TP + P+ S +
Sbjct: 129 SLTTTPSRA---SLSMTPSTAAALTMPSRASLTRTPPRASLTMTPSTASLTRTPPRASPT 185
Query: 262 ALEAAAANGGQRPRERNLVRRESEA 286
+ + + G P +L + +S A
Sbjct: 186 GMPSRTSPTGM-PSTASLTKMDSTA 209
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 42.4 bits (98), Expect = 0.001
Identities = 48/174 (27%), Positives = 60/174 (34%), Gaps = 41/174 (23%)
Query: 87 VPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSL 146
VPP P G+P + P+PP H PP A P G +S
Sbjct: 247 VPPPGALPPGIPPAMPPPPMPP----------GAAGHGPP--SAGTPGAG--HPGHGHSH 292
Query: 147 PYAVPPNFLPSPLLSPSANLATSHLPHFV--PYASLLAEGATPPPQ--------APSPAH 196
P+ PP +P P +S H PH + P+A G PPP+ P P
Sbjct: 293 PHPFPPGGMPHPGMSQMQ--LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMG 350
Query: 197 SFNKAPSATSPSGQ---LPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPP 247
+ P SP G +P H P L P P GYT PP
Sbjct: 351 MPPRGPPFGSPMGHPGPMPPHGMRGPPPLMP------------PHGYTGPPRPP 392
Score = 40.8 bits (94), Expect = 0.004
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 133 PSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAP 192
P+ + +GS P PP P P+ P A LP +P A PPP P
Sbjct: 221 PNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGA------LPPGIP-------PAMPPPPMP 267
Query: 193 SPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMP 228
P + + PSA +P P H + P PG MP
Sbjct: 268 -PGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
Score = 32.3 bits (72), Expect = 1.5
Identities = 41/149 (27%), Positives = 52/149 (34%), Gaps = 15/149 (10%)
Query: 159 LLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQ 218
LL+ L+ + PH L A+ A PPP AP+P S S P G P S
Sbjct: 194 LLAAQNPLSQADRPH-----QLFAD-APPPPSAPNPVVS--SLGSGLPPPGMPPPGSFPP 245
Query: 219 PLD----LAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQSALEAAAANGGQRP 274
P+ L PG +P +P G H P AG P S G P
Sbjct: 246 PVPPPGALPPG-IPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHP 304
Query: 275 --RERNLVRRESEALDSPNSKGEGQGLVP 301
+ L L P++ G G P
Sbjct: 305 GMSQMQLAHHGPHGLGHPHAGPPGSGGQP 333
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 42.4 bits (98), Expect = 0.001
Identities = 52/180 (28%), Positives = 63/180 (35%), Gaps = 31/180 (17%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLP 147
PP PT LP V+ P+ P +Q H PP + A P +P
Sbjct: 731 PPPLAQPTPLPQVLAPQPVVP--------LQPVPPHLPP-YLAPASQVGAPAQLKPLQMP 781
Query: 148 YA-------VPPNFLPSPLLSPSANLA-TSHLPHFVPYASLLAEGATPPPQAPSPAHSFN 199
A VPP P P++ P LA LP +P PPPQ SPA
Sbjct: 782 QAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVIL- 840
Query: 200 KAPSATSPSGQLPHHSSTQPLDL--------APGRMPIYYQMSRLPAGYTLHETPPAGAS 251
PS +P LP S PL AP MP + PA L P G +
Sbjct: 841 --PSLAAP---LPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVA 895
Score = 31.2 bits (69), Expect = 3.3
Identities = 36/152 (23%), Positives = 51/152 (33%), Gaps = 13/152 (8%)
Query: 82 LYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLH--YAQLPSTSLQF 139
L V +P +P +P + P T + + + PG+ +H AQLP +
Sbjct: 856 LQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLA--VAPPGVAALSIHSAVAQLPGQPVY- 912
Query: 140 IGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATP-----PPQAPSP 194
P + P P + PSP + AT P P +L + P PPQ P
Sbjct: 913 ---PAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLP 969
Query: 195 AHSFNKAPSATSPSGQLPHHSSTQPLDLAPGR 226
P LP P P R
Sbjct: 970 PQPTRPPQPVLPPQPMLPPQPVLPPQPALPVR 1001
Score = 29.6 bits (65), Expect = 9.7
Identities = 39/144 (27%), Positives = 51/144 (35%), Gaps = 26/144 (18%)
Query: 125 PPLHYAQLPSTSLQFIGSPYSLPYA---VPPNFLPSPLLSPSANLATSHLPHFVPYASLL 181
PP+ + SL +G+ Y P A +P +P+P PS HF P ++
Sbjct: 654 PPVSEGPVLPQSLPSLGA-YQQPTAAPGLPVGSVPAPACPPSLQ------QHF-PDPAMS 705
Query: 182 AEGATPPPQAPSPAHSFNKAPSATSP-----SGQLPHHSSTQ---PLDLAPGRMPIYYQM 233
PPP P P AP P LP + Q PL P +P Y
Sbjct: 706 FAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYL-- 763
Query: 234 SRLPAGYTLHETPPAGASPVLTPQ 257
PA PA P+ PQ
Sbjct: 764 --APASQV---GAPAQLKPLQMPQ 782
>gi|51468067 Sp5 transcription factor [Homo sapiens]
Length = 398
Score = 42.4 bits (98), Expect = 0.001
Identities = 50/167 (29%), Positives = 62/167 (37%), Gaps = 22/167 (13%)
Query: 93 SPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPY---- 148
+P+ P + SPL S I PG PP + Q+P +GSP L +
Sbjct: 20 TPSASPDLGKHSPLA-LLAATCSRIGQPGAAAPP-DFLQVPYDPA--LGSPSRLFHPWTA 75
Query: 149 ---AVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSAT 205
A P LP P PS L T H P E PP PS + F
Sbjct: 76 DMPAHSPGALPPP--HPSLGL-TPQKTHLQPSFGAAHELPLTPPADPSYPYEF------- 125
Query: 206 SPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASP 252
SP LP + P AP +P Y + LP GY+ PP P
Sbjct: 126 SPVKMLPSSMAALPASCAPAYVP-YAAQAALPPGYSNLLPPPPPPPP 171
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 42.0 bits (97), Expect = 0.002
Identities = 45/184 (24%), Positives = 61/184 (33%), Gaps = 26/184 (14%)
Query: 86 AVPPATFSPTGLPSVVNMSPL---PPTFNVASSLIQHPGIHYPPLH--YAQLPSTSLQFI 140
A+PP P + + +PL PP L++ PPL QL LQ +
Sbjct: 879 ALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKV 938
Query: 141 GSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNK 200
P L +V P P L P PH P + PPP P P
Sbjct: 939 QPPTPLLPSVKVQSQPPPPLPPP--------PH--PSVQQQLQQQPPPPPPPQP------ 982
Query: 201 APSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQ 260
P Q H +P+ L P + + Q P G PP P P + Q
Sbjct: 983 -----QPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQ 1037
Query: 261 SALE 264
++
Sbjct: 1038 QVIQ 1041
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 41.6 bits (96), Expect = 0.002
Identities = 57/189 (30%), Positives = 68/189 (35%), Gaps = 29/189 (15%)
Query: 88 PPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLP 147
PPA PT L ++ PLPP A + P P L P LQ GSP
Sbjct: 1196 PPAEPPPTDL---AHLPPLPPPEGEARKPAKPPVSPKPVLTQ---PVPKLQ--GSPTPTS 1247
Query: 148 YAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSP 207
VP LP P SP A P P PPP AP P + PS ++
Sbjct: 1248 KKVP---LPGPG-SPEVKRAHGTPPPVSPKPP-------PPPTAPKPVKAVAGLPSGSAG 1296
Query: 208 SGQLPHHSSTQPLDLA--PGRMPIYYQMSRLPAGYTLHETPPAGASPVLTPQESQSALEA 265
P + P LA PG P + PA + P GA + P + A A
Sbjct: 1297 PSPAPSPARQPPAALAKPPGTPP---SLGASPA-----KPPSPGAPALHVPAKPPRAAAA 1348
Query: 266 AAANGGQRP 274
AAA P
Sbjct: 1349 AAAAAAAPP 1357
Score = 32.0 bits (71), Expect = 2.0
Identities = 36/135 (26%), Positives = 44/135 (32%), Gaps = 34/135 (25%)
Query: 96 GLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSP---------YSL 146
G P V+ P PP P P A LPS S +P +
Sbjct: 1265 GTPPPVSPKPPPP-----------PTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAK 1313
Query: 147 PYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATS 206
P PP+ SP PS H+P P A+ A A P AP
Sbjct: 1314 PPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAP-------------- 1359
Query: 207 PSGQLPHHSSTQPLD 221
P G P S+ Q L+
Sbjct: 1360 PEGASPGDSARQKLE 1374
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 41.6 bits (96), Expect = 0.002
Identities = 65/285 (22%), Positives = 105/285 (36%), Gaps = 44/285 (15%)
Query: 14 PKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGARVSLGGDGAEAITG 73
P LPV + G +++ TP V+A S G ++
Sbjct: 1604 PPLAPLPVLAPSPGAAPVLASSQTPVP---------VMAPSSTPGTSLASASPVPAPTPV 1654
Query: 74 LTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSL------IQHPGIHYPPL 127
L + VP SP ++ L PT +S +P +P
Sbjct: 1655 LAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQ 1714
Query: 128 HYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATP 187
+ P++SL + +P A + P P L P+ L+ + P P +
Sbjct: 1715 TLSLTPASSL--VPTP-----AQTLSLAPGPPLGPTQTLSLAPAPPLAPAS--------- 1758
Query: 188 PPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPP 247
P P+PAH+ AP+++S S P +S Q L L+P +P A TL P
Sbjct: 1759 -PVGPAPAHTLTLAPASSSASLLAP--ASVQTLTLSPAPVPTLGP----AAAQTLALAPA 1811
Query: 248 AGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNS 292
+ SP SQ++ +A+G P +V R + D P++
Sbjct: 1812 STQSPA-----SQASSLVVSASGA-APLPVTMVSRLPVSKDEPDT 1850
Score = 40.0 bits (92), Expect = 0.007
Identities = 75/292 (25%), Positives = 107/292 (36%), Gaps = 54/292 (18%)
Query: 3 PVHERSQECLP-PKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQA---- 57
P+H S LP P +P+ + + ST P S + S + + A
Sbjct: 1400 PLHVPSS--LPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTI 1457
Query: 58 --GARVSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVAS- 114
A +++ G +T +T VP A P+ PS + S T +A+
Sbjct: 1458 PISAPLTVSASGPALLTSVTPP-----LAPVVPAAPGPPSLAPSGASPSASALTLGLATA 1512
Query: 115 ---SLIQHPG---------IHYPPLHYAQLPSTSLQFI-GSPYSLPYAVPPNFLPS---- 157
S Q PG H P L+ P+ S + S + P+ PN P+
Sbjct: 1513 PSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASL 1572
Query: 158 --PLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHS 215
P S S LAT P P ++LA + PP AP P A SP S
Sbjct: 1573 LAPASSASQALATPLAPMAAPQTAILAP-SPAPPLAPLPV-------LAPSPGAAPVLAS 1624
Query: 216 STQPLD-LAPGRMPIYYQMSRLPAGYTLHETPPAGA-SPVLTPQESQSALEA 265
S P+ +AP P G +L P A +PVL P +Q+ L A
Sbjct: 1625 SQTPVPVMAPSSTP----------GTSLASASPVPAPTPVLAPSSTQTMLPA 1666
Score = 38.9 bits (89), Expect = 0.016
Identities = 93/394 (23%), Positives = 133/394 (33%), Gaps = 52/394 (13%)
Query: 5 HERSQECLPPKKRDLPVTSEDMG-RTTSCSTNHTPSSDASEWSRGVVVAGQSQAGARVS- 62
H RS++ P++ V+ G R + NHTP A + S A RV
Sbjct: 2379 HRRSKKAKAPERPGTRVSERLRGARAETQGANHTPVISAHQTRSTTTPPRCSPARERVPR 2438
Query: 63 -------LGGDGAEAITGLTVDQYGMLYKVAVP-PATFSPTG-LPSVVNMSPLPPTFNVA 113
AI L ++ P P T P LPS S +PP + A
Sbjct: 2439 PAPRPRPTPASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPA 2498
Query: 114 SSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPH 173
+ P PP H T L SP L PP+ P+ + NL P
Sbjct: 2499 CT--PPPACTPPPAHTPPPAQTCLVTPSSPLLLG---PPSV---PISASVTNLPLGLRPE 2550
Query: 174 FVPYASLLAEGATPPPQAPSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIY--- 230
A L A+ P S A A+S + L S P DL P + I
Sbjct: 2551 ----AELCAQALASP-------ESLELASVASSETSSL---SLVPPKDLLPVAVEILPVS 2596
Query: 231 -YQMSRLPAGYTLHETPPAGASPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDS 289
+S P+ +L T AG+ P QE+ + E E L ES L+
Sbjct: 2597 EKNLSLTPSAPSL--TLEAGSIPNGQEQEAPDSAEGTTLTVLPEGEELPLCVSESNGLEL 2654
Query: 290 PNSKGEGQGLVPVVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDY 349
P S + L +E + + ++TP T + + V +A+
Sbjct: 2655 PPSAASDEPLQEPLEADRTSEELTEAKTP-----------TSSPEKPQELVTAEVAAPST 2703
Query: 350 RVVAAQRKEEPSPLNLSHH--TPDHQGEGRGSAR 381
A E PSP + D + G+G+ R
Sbjct: 2704 SSSATSSPEGPSPARPPRRRTSADVEIRGQGTGR 2737
Score = 36.6 bits (83), Expect = 0.080
Identities = 55/237 (23%), Positives = 87/237 (36%), Gaps = 26/237 (10%)
Query: 6 ERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQ-AGARVSLG 64
++++E + ++DL E++ R + D S G +S+ A A G
Sbjct: 2333 KQAEEQVEAARKDLDQAKEEVFRLPQEEEEGPGAGDESSCGTGGGTHRRSKKAKAPERPG 2392
Query: 65 GDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHY 124
+E + G + G A +P + PP + A + P
Sbjct: 2393 TRVSERLRGARAETQG---------ANHTPVISAHQTRSTTTPPRCSPARERVPRPAPRP 2443
Query: 125 PPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPL-LSPSANLATSHLPHFVPYASLLAE 183
P A P+ + P S P P P+P+ + P L + P +P S +
Sbjct: 2444 RPTP-ASAPAAIPALVPVPVSAPV---PISAPNPITILPVHILPSPPPPSQIPPCS--SP 2497
Query: 184 GATPPPQA-PSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAG 239
TPPP P PAH T P Q + + PL L P +PI ++ LP G
Sbjct: 2498 ACTPPPACTPPPAH--------TPPPAQTCLVTPSSPLLLGPPSVPISASVTNLPLG 2546
Score = 36.2 bits (82), Expect = 0.10
Identities = 49/188 (26%), Positives = 67/188 (35%), Gaps = 33/188 (17%)
Query: 131 QLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQ 190
Q+ SL SP P +P + P P+L P + LP +P + G + PP
Sbjct: 1043 QVLPASLMVSASPAGPPL-IPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPT 1101
Query: 191 APSPAHSFNKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTLHETPPAGA 250
AP SP+ S +PL +P GYT PPA A
Sbjct: 1102 PTLSLKPTPPAPVRLSPAPPPGSSSLLKPL--------------TVPPGYTF---PPAAA 1144
Query: 251 SPVLTPQESQSALEAAAANGGQRPRERNLVRRESEALDSPNSKGEGQGLVPVVECVVDGQ 310
T + +A A P + L+ SP+ Q +P E V GQ
Sbjct: 1145 ----TTTSTTTATATTTAVPAPTPAPQRLIL-------SPDM----QARLPSGEVVSIGQ 1189
Query: 311 LFSGSQTP 318
L S +Q P
Sbjct: 1190 LASLAQRP 1197
Score = 33.5 bits (75), Expect = 0.67
Identities = 45/184 (24%), Positives = 68/184 (36%), Gaps = 42/184 (22%)
Query: 86 AVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPLHYAQLPSTSLQFIGSPYS 145
+ P T +PTGL + + +PPT ++ + G+ + Q P L
Sbjct: 1278 STPSTTPAPTGLSLPLAANQVPPT------MVNNTGV--VKIVVRQAPRDGL-------- 1321
Query: 146 LPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPP-----QAPSPAHSFNK 200
P P L+P+ +S LP + L G P P +AP P
Sbjct: 1322 ---------TPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMP------ 1366
Query: 201 APSATSPSGQLPHHSSTQPLDLAPGRMPI-----YYQMSRLPAGYTLHETPPAGASPVLT 255
P+ P +L H S + APG P+ + S LP G P +SP+ +
Sbjct: 1367 TPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLP-GPASSPMPIPNSSPLAS 1425
Query: 256 PQES 259
P S
Sbjct: 1426 PVSS 1429
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 41.2 bits (95), Expect = 0.003
Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 19/184 (10%)
Query: 84 KVAVPPATFSPTGLPSVVNMSP------LPPTFNVASSLIQHPGIHYPPLHYAQLPSTSL 137
+ A PP +P P + + SP PP+ + L Q + P +Q P L
Sbjct: 654 QAAAPPQATTPQPSPGLAS-SPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQP---L 709
Query: 138 QFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQAPSPAHS 197
G S+P +V + P P P+ + P A P PQ P+ A
Sbjct: 710 SAEGPHLSVPASVIVS-APPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPL 768
Query: 198 FNKAPSAT------SPSGQLPHHSSTQPLDLAPGRMPIYYQ-MSRLPAGYTLHETPPAGA 250
PS++ +P G PH S P P R P Q +SR P+ LH PP A
Sbjct: 769 KGPGPSSSPSLPHQAPLGDSPHLPSPHPTR-PPSRPPSRPQSVSRPPSEPPLHPCPPPQA 827
Query: 251 SPVL 254
P L
Sbjct: 828 PPTL 831
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,761,032
Number of Sequences: 37866
Number of extensions: 1912935
Number of successful extensions: 8261
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 497
Number of HSP's that attempted gapping in prelim test: 7121
Number of HSP's gapped (non-prelim): 1368
length of query: 689
length of database: 18,247,518
effective HSP length: 109
effective length of query: 580
effective length of database: 14,120,124
effective search space: 8189671920
effective search space used: 8189671920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.