Guide to the Human Genome
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Name: GORASP2 Sequence: fasta or formatted (452aa) NCBI GI: 29826294
Description:

golgi reassembly stacking protein 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         29           2
 C cysteine            0.7          3           1
 D aspartate           3.8         17           1
 E glutamate           6.0         27           2
 F phenylalanine       2.2         10           2
 G glycine             8.4         38           3
 H histidine           1.5          7           1
 I isoleucine          4.0         18           2
 K lysine              3.1         14           2
 L leucine            11.5         52           2
 M methionine          1.8          8           1
 N asparagine          5.3         24           1
 P proline            13.1         59           2
 Q glutamine           1.8          8           1
 R arginine            2.4         11           1
 S serine             11.5         52           3
 T threonine           7.3         33           3
 V valine              7.1         32           1
 W tryptophan          0.7          3           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi reassembly stacking protein 2 
GORASP1               0.333   Golgi reassembly stacking protein 1 
FMN2                  0.044   formin 2 
MUC2                  0.043   mucin 2 precursor 
NACA                  0.042   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.042   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.042   PREDICTED: hypothetical protein LOC80164 
EP300                 0.041   E1A binding protein p300 
ZNF207                0.041   zinc finger protein 207 isoform a 
FLJ22184              0.040   PREDICTED: hypothetical protein FLJ22184 
SFRS15                0.037   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.037   splicing factor, arginine/serine-rich 15 isoform 1 [...
RBM12                 0.036   RNA binding motif protein 12 
RBM12                 0.036   RNA binding motif protein 12 
ZNF207                0.036   zinc finger protein 207 isoform c 
LOC100134663          0.036   PREDICTED: hypothetical protein, partial 
POM121C               0.036   POM121 membrane glycoprotein (rat)-like 
LOC100288540          0.034   PREDICTED: hypothetical protein XP_002342775 
SOBP                  0.034   sine oculis binding protein homolog 
POM121                0.034   nuclear pore membrane protein 121 
MUC17                 0.034   mucin 17 
ZNF207                0.033   zinc finger protein 207 isoform b 
BCORL1                0.033   BCL6 co-repressor-like 1 
LOC100134147          0.032   PREDICTED: hypothetical protein 
MLXIPL                0.032   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.032   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.032   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.032   Williams Beuren syndrome chromosome region 14 isofor...
WNK2                  0.032   WNK lysine deficient protein kinase 2 
WASF1                 0.031   Wiskott-Aldrich syndrome protein family member 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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