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Search of human proteins with 212549536
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|212549536 regulator of G-protein signaling like 1 [Homo
sapiens]
(1076 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|212549536 regulator of G-protein signaling like 1 [Homo sapiens] 2170 0.0
gi|158534077 regulator of G-protein signaling 22 [Homo sapiens] 61 6e-09
gi|156627573 zinc finger protein 836 [Homo sapiens] 36 0.22
gi|88703045 proline rich 11 [Homo sapiens] 36 0.22
gi|88759337 ATP binding domain 1 family, member B [Homo sapiens] 34 0.85
gi|41281808 harmonin isoform b3 [Homo sapiens] 33 1.1
gi|4506613 ribosomal protein L22 proprotein [Homo sapiens] 33 1.1
gi|10835159 plasminogen activator inhibitor-1 [Homo sapiens] 33 1.4
gi|65507403 SEC15-like 1 isoform a [Homo sapiens] 33 1.9
gi|62243652 SEC15-like 1 isoform b [Homo sapiens] 33 1.9
gi|224586823 coiled-coil domain containing 110 isoform b [Homo s... 32 2.5
gi|22749515 coiled-coil domain containing 110 isoform a [Homo sa... 32 2.5
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 32 3.2
gi|110349719 titin isoform N2-A [Homo sapiens] 32 3.2
gi|7019333 nuclear receptor binding protein [Homo sapiens] 32 3.2
gi|4504063 golgin 97 [Homo sapiens] 32 4.2
gi|14277690 hypothetical protein LOC9750 isoform 2 [Homo sapiens] 32 4.2
gi|164414421 hypothetical protein LOC9750 isoform 1 [Homo sapiens] 32 4.2
gi|157671933 hypothetical protein LOC168090 [Homo sapiens] 32 4.2
gi|4507943 exportin 1 [Homo sapiens] 31 5.5
gi|146260271 hypothetical protein LOC129881 [Homo sapiens] 31 5.5
gi|39995084 integrator complex subunit 3 [Homo sapiens] 31 5.5
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 31 7.2
gi|5031877 lamin B1 [Homo sapiens] 31 7.2
gi|239754359 PREDICTED: similar to heat shock 70kD protein bindi... 31 7.2
gi|239748906 PREDICTED: hypothetical protein XP_002346852 [Homo ... 31 7.2
gi|239742930 PREDICTED: hypothetical protein XP_002342689 [Homo ... 31 7.2
gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 31 7.2
gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 31 7.2
gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 31 7.2
>gi|212549536 regulator of G-protein signaling like 1 [Homo sapiens]
Length = 1076
Score = 2170 bits (5622), Expect = 0.0
Identities = 1076/1076 (100%), Positives = 1076/1076 (100%)
Query: 1 MSSAEIIGSTNLIILLEDEVFADFFNTFLSLPVFGQTPFYTVENSQWSLWPEIPCNLIAK 60
MSSAEIIGSTNLIILLEDEVFADFFNTFLSLPVFGQTPFYTVENSQWSLWPEIPCNLIAK
Sbjct: 1 MSSAEIIGSTNLIILLEDEVFADFFNTFLSLPVFGQTPFYTVENSQWSLWPEIPCNLIAK 60
Query: 61 YKGLLTWLEKCRLPFFCKTNLCFHYILCQEFISFIKSPEGGEELVDFWILAENILSIDEM 120
YKGLLTWLEKCRLPFFCKTNLCFHYILCQEFISFIKSPEGGEELVDFWILAENILSIDEM
Sbjct: 61 YKGLLTWLEKCRLPFFCKTNLCFHYILCQEFISFIKSPEGGEELVDFWILAENILSIDEM 120
Query: 121 DLEVRDYYLSLLLMLRATHLQEGSRVVTLCNMNIKSLLNLSIWHPNQSTTRREILSHMQK 180
DLEVRDYYLSLLLMLRATHLQEGSRVVTLCNMNIKSLLNLSIWHPNQSTTRREILSHMQK
Sbjct: 121 DLEVRDYYLSLLLMLRATHLQEGSRVVTLCNMNIKSLLNLSIWHPNQSTTRREILSHMQK 180
Query: 181 VALFKLQSYWLPNFYTHTKMTMAKEEACHGLMQEYETRLYSVCYTHIGGLPLNMSIKKCH 240
VALFKLQSYWLPNFYTHTKMTMAKEEACHGLMQEYETRLYSVCYTHIGGLPLNMSIKKCH
Sbjct: 181 VALFKLQSYWLPNFYTHTKMTMAKEEACHGLMQEYETRLYSVCYTHIGGLPLNMSIKKCH 240
Query: 241 HFQKRYSSRKAKRKMWQLVDPDSWSLEMDLKPDAIGMPLQETCPQEKVVIQMPSLKMASS 300
HFQKRYSSRKAKRKMWQLVDPDSWSLEMDLKPDAIGMPLQETCPQEKVVIQMPSLKMASS
Sbjct: 241 HFQKRYSSRKAKRKMWQLVDPDSWSLEMDLKPDAIGMPLQETCPQEKVVIQMPSLKMASS 300
Query: 301 KETRISSLEKDMHYAKISSMENKAKSHLHMEAPFETKVSTHLRTVIPIVNHSSKMTIQKA 360
KETRISSLEKDMHYAKISSMENKAKSHLHMEAPFETKVSTHLRTVIPIVNHSSKMTIQKA
Sbjct: 301 KETRISSLEKDMHYAKISSMENKAKSHLHMEAPFETKVSTHLRTVIPIVNHSSKMTIQKA 360
Query: 361 IKQSFSLGYIHLALCADACAGNPFRDHLKKLNLKVEIQLLDLWQDLQHFLSVLLNNKKNG 420
IKQSFSLGYIHLALCADACAGNPFRDHLKKLNLKVEIQLLDLWQDLQHFLSVLLNNKKNG
Sbjct: 361 IKQSFSLGYIHLALCADACAGNPFRDHLKKLNLKVEIQLLDLWQDLQHFLSVLLNNKKNG 420
Query: 421 NAIFRHLLGDRICELYLNEQIGPCLPLKSQTIQGLKELLPSGDVIPWIPKAQKEICKMLS 480
NAIFRHLLGDRICELYLNEQIGPCLPLKSQTIQGLKELLPSGDVIPWIPKAQKEICKMLS
Sbjct: 421 NAIFRHLLGDRICELYLNEQIGPCLPLKSQTIQGLKELLPSGDVIPWIPKAQKEICKMLS 480
Query: 481 PWYDEFLDEEDYWFLLFTTQNRFISSRQHKREFIGKEENILLYKRIQQSLELSQALADMK 540
PWYDEFLDEEDYWFLLFTTQNRFISSRQHKREFIGKEENILLYKRIQQSLELSQALADMK
Sbjct: 481 PWYDEFLDEEDYWFLLFTTQNRFISSRQHKREFIGKEENILLYKRIQQSLELSQALADMK 540
Query: 541 EMDYRQWRKIATEDLKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKISDDYKI 600
EMDYRQWRKIATEDLKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKISDDYKI
Sbjct: 541 EMDYRQWRKIATEDLKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKISDDYKI 600
Query: 601 YCEKAPKIDFKMEIIKETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFR 660
YCEKAPKIDFKMEIIKETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFR
Sbjct: 601 YCEKAPKIDFKMEIIKETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFR 660
Query: 661 EFLKERKAKIPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQLSPEEMLQCDAPIIK 720
EFLKERKAKIPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQLSPEEMLQCDAPIIK
Sbjct: 661 EFLKERKAKIPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQLSPEEMLQCDAPIIK 720
Query: 721 EIASMRHVTTSTLLTLQGHVMKSIEEKWFKDYQDLFPPHHQEVEVQSEVQISSRKPSKIV 780
EIASMRHVTTSTLLTLQGHVMKSIEEKWFKDYQDLFPPHHQEVEVQSEVQISSRKPSKIV
Sbjct: 721 EIASMRHVTTSTLLTLQGHVMKSIEEKWFKDYQDLFPPHHQEVEVQSEVQISSRKPSKIV 780
Query: 781 STYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKRQEFEDYLHQEMQNSKENFTTAHNTS 840
STYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKRQEFEDYLHQEMQNSKENFTTAHNTS
Sbjct: 781 STYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKRQEFEDYLHQEMQNSKENFTTAHNTS 840
Query: 841 GRSAPPSTNVRSADQENGEITLVKRRIFGHRIITVNFAINDLYFFSEMEKFNDLVSSAHM 900
GRSAPPSTNVRSADQENGEITLVKRRIFGHRIITVNFAINDLYFFSEMEKFNDLVSSAHM
Sbjct: 841 GRSAPPSTNVRSADQENGEITLVKRRIFGHRIITVNFAINDLYFFSEMEKFNDLVSSAHM 900
Query: 901 LQVNRAYNENDVILMRSKMNIIQKLFLNSDIPPKLRVNVPEFQKDAILAAITEGYLDRSV 960
LQVNRAYNENDVILMRSKMNIIQKLFLNSDIPPKLRVNVPEFQKDAILAAITEGYLDRSV
Sbjct: 901 LQVNRAYNENDVILMRSKMNIIQKLFLNSDIPPKLRVNVPEFQKDAILAAITEGYLDRSV 960
Query: 961 FHGAIMSVFPVVMYFWKRFCFWKATRSYLQYRGKKFKDRKSPPKSTDKYPFSSGGDNAIL 1020
FHGAIMSVFPVVMYFWKRFCFWKATRSYLQYRGKKFKDRKSPPKSTDKYPFSSGGDNAIL
Sbjct: 961 FHGAIMSVFPVVMYFWKRFCFWKATRSYLQYRGKKFKDRKSPPKSTDKYPFSSGGDNAIL 1020
Query: 1021 RFTLLRGIEWLQPQREAISSVQNSSSSKLTQPRLVVSAMQLHPVQGQKLSYIKKEK 1076
RFTLLRGIEWLQPQREAISSVQNSSSSKLTQPRLVVSAMQLHPVQGQKLSYIKKEK
Sbjct: 1021 RFTLLRGIEWLQPQREAISSVQNSSSSKLTQPRLVVSAMQLHPVQGQKLSYIKKEK 1076
>gi|158534077 regulator of G-protein signaling 22 [Homo sapiens]
Length = 1264
Score = 60.8 bits (146), Expect = 6e-09
Identities = 81/356 (22%), Positives = 147/356 (41%), Gaps = 96/356 (26%)
Query: 647 TEVLLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIET----NEKICKSL-IEN--VIK 699
+++L N E FR+FL+ + + L T +++ T N++ KS+ I+N + K
Sbjct: 854 SDLLNNKLEFEHFRQFLETHSSSMDLMCWTDIEQFRRITYRDRNQRKAKSIYIKNKYLNK 913
Query: 700 TFFQGQLSPEEMLQCD---------APIIKEIASMRHVTTSTLLTLQGHVMKSIEEKWFK 750
+F G SP + Q + I+ E + L+ +Q HV +E W
Sbjct: 914 KYFFGPNSPASLYQQNQVMHLSGGWGKILHE-----QLDAPVLVEIQKHVQNRLENVWL- 967
Query: 751 DYQDLFPPHHQEVEVQSEVQISSRKPSKIVSTYLQESQKK--GWMRMIS-FIRSFCK--- 804
LF Q + ++++ + ++ LQ+++KK W + S +I S CK
Sbjct: 968 ---PLFLASEQ-FAARQKIKVQMKDIAE--ELLLQKAEKKIGVWKPVESKWISSSCKIIA 1021
Query: 805 YRRFMLNPSKRQEFEDYLHQEMQNSKENFTTAHNTSGRSAPPSTNVRSADQENGEITLVK 864
+R+ +LNP ++F+ ++ ++ ENG
Sbjct: 1022 FRKALLNPVTSRQFQRFV--------------------------ALKGDLLENG------ 1049
Query: 865 RRIFGHRIITVNFAINDLYFFSEMEKFNDLVSSAHMLQVNRAYNENDVILMRSKMNIIQK 924
L F+ E++K+ DL ++ D +++ K+ I
Sbjct: 1050 -----------------LLFWQEVQKYKDL-----------CHSHCDESVIQKKITTIIN 1081
Query: 925 LFLNSDIPPKLRVNVPEFQKDAILAAITEGYLDRSVFHGAIMSVFPVVMYFWKRFC 980
F+NS IPP L++++P Q I+ E L VF A M++F V+ FW +FC
Sbjct: 1082 CFINSSIPPALQIDIPVEQAQKIIEHRKE--LGPYVFREAQMTIFGVLFKFWPQFC 1135
>gi|156627573 zinc finger protein 836 [Homo sapiens]
Length = 936
Score = 35.8 bits (81), Expect = 0.22
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Query: 616 KETKTVSRSNRKMSLLKRTLVRKPSMRPRN--LTEVLLNTQHLEFFREFLKERKAKIPLQ 673
KE + SN TL R N L E+ N Q LEF + + ++P+
Sbjct: 56 KELPPIGNSNTGEKCQTVTLERHECYDVENFYLREIQKNLQDLEFQWKDGEINYKEVPMT 115
Query: 674 FLTAVQ-KISIETNEKICKSLIENVIKTFFQGQLSPEEMLQCDAPIIKEIASMRHVTTST 732
+ + K + E + IEN + FQ +L+ + Q + I + S + V S+
Sbjct: 116 YKNNLNGKRGQHSQEDVENKCIENQLTLSFQSRLTELQKFQTEGKIYECNQSEKTVNNSS 175
Query: 733 LLTLQGHVMKSIEEKWFKDYQDLF 756
L++ ++ S++ K Y++ F
Sbjct: 176 LVSPLQRILPSVQTNISKKYENEF 199
>gi|88703045 proline rich 11 [Homo sapiens]
Length = 360
Score = 35.8 bits (81), Expect = 0.22
Identities = 19/68 (27%), Positives = 39/68 (57%)
Query: 646 LTEVLLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQ 705
LT L TQ L+ R+ + KA+ PL ++ +Q ++++ N K+ + + NV+ T + Q
Sbjct: 233 LTVKLKKTQSLDEKRKLIPSPKARNPLVTVSDLQHVTLKPNSKVLSTRVTNVLITPGKSQ 292
Query: 706 LSPEEMLQ 713
+ ++L+
Sbjct: 293 MDLRKLLR 300
>gi|88759337 ATP binding domain 1 family, member B [Homo sapiens]
Length = 310
Score = 33.9 bits (76), Expect = 0.85
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 336 TKVSTHLRTVIPIVNHSSKMT-IQKAIKQSFSLGY----IHLALCADACAGNPFRDHLKK 390
T ++T L +P +N SKM I+ K +F+L Y + L+ D A +PF H ++
Sbjct: 161 TSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHLASDPFFRHYRQ 220
Query: 391 LNLKVEIQLLDLWQDLQHFLSVLLNNKKN 419
LN K+ +QL++ + L F+ + + +K++
Sbjct: 221 LNEKL-VQLIEDY-SLVSFIPLNIQDKES 247
>gi|41281808 harmonin isoform b3 [Homo sapiens]
Length = 899
Score = 33.5 bits (75), Expect = 1.1
Identities = 48/262 (18%), Positives = 108/262 (41%), Gaps = 37/262 (14%)
Query: 495 LLFTTQNRFISSRQHKREFIGKEENILLYKRIQQSLELSQALADMKEMDYRQWRKIATED 554
L T + R +RQ + + + +L+ KR+ ++E ++ L + +EM+ ++ ++IA +
Sbjct: 296 LFMTDRERLAEARQRELQ----RQELLMQKRL--AMESNKILQEQQEMERQRRKEIAQKA 349
Query: 555 LKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKISDDYKIYCEKAPKIDFKMEI 614
++ + E+ V + K +EE ++ + K I E P +
Sbjct: 350 AEENERYRKEMEQIVEEEEKFKKQWEEDWGSKEQLLLPKT-----ITAEVHP---VPLRK 401
Query: 615 IKETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFREFLKERKAKIPLQF 674
K R + K +++ K + +L ++ N + LEF ++ KE++ + +
Sbjct: 402 PKSFGWFYRYDGKFPTIRKKGKDKKKAKYGSLQDLRKNKKELEFEQKLYKEKEEMLEKEK 461
Query: 675 LTAVQKISIETN-----------------EKICKSLIE------NVIKTFFQGQLSPEEM 711
+ +++ E + E++C++ +E N I G P
Sbjct: 462 QLKINRLAQEVSETEREDLEESEKIQYWVERLCQTRLEQISSADNEISEMTTGPPPPPPS 521
Query: 712 LQCDAPIIKEIASMRHVTTSTL 733
+ AP ++ A H+ T+ L
Sbjct: 522 VSPLAPPLRRFAGGLHLHTTDL 543
>gi|4506613 ribosomal protein L22 proprotein [Homo sapiens]
Length = 128
Score = 33.5 bits (75), Expect = 1.1
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 762 EVEVQSEVQISSRKPSKIVSTYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKRQEFED 820
++ V SEV S R + YL+++ + W+R+++ + + R F +N + +E ++
Sbjct: 69 KITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDE 127
>gi|10835159 plasminogen activator inhibitor-1 [Homo sapiens]
Length = 402
Score = 33.1 bits (74), Expect = 1.4
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 615 IKETKTVSRSNRKMSLLKRTLVR-KPSMRPR-NLTEVLLNTQHLEFFREFLKERKA---K 669
I + +S M+ L R LV K S+ +L + L N + FR+F + + +
Sbjct: 276 ILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQ 335
Query: 670 IPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQLSPEEMLQCDAPIIKEIASMRHVT 729
PL A+QK+ IE NE ++ + +++PEE++ D P + + RH
Sbjct: 336 EPLHVAQALQKVKIEVNES--GTVASSSTAVIVSARMAPEEIIM-DRPFLFVV---RHNP 389
Query: 730 TSTLLTLQGHVMK 742
T T+L G VM+
Sbjct: 390 TGTVL-FMGQVME 401
>gi|65507403 SEC15-like 1 isoform a [Homo sapiens]
Length = 804
Score = 32.7 bits (73), Expect = 1.9
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 626 RKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIET 685
R +S L+RKP + L ++++NT HLE ++L++ F+T + IS ET
Sbjct: 527 RTLSSCLLNLIRKPHIGLTELVQIIINTTHLEQACKYLED--------FITNITNISQET 578
>gi|62243652 SEC15-like 1 isoform b [Homo sapiens]
Length = 799
Score = 32.7 bits (73), Expect = 1.9
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 626 RKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIET 685
R +S L+RKP + L ++++NT HLE ++L++ F+T + IS ET
Sbjct: 522 RTLSSCLLNLIRKPHIGLTELVQIIINTTHLEQACKYLED--------FITNITNISQET 573
>gi|224586823 coiled-coil domain containing 110 isoform b [Homo
sapiens]
Length = 796
Score = 32.3 bits (72), Expect = 2.5
Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 26/289 (8%)
Query: 508 QHKREFIGKEENI-------LLYKRIQQSLELSQALADMKEMDY-------RQWRKIATE 553
Q K FI KEEN+ + KRI + L + L +E R+ +K++
Sbjct: 251 QDKMNFI-KEENLDGNLNEDIKSKRISELEALVKKLLPFRETVSKFHVHFCRKCKKLSKS 309
Query: 554 DLKQGGSLQVELTS-PVFLTDITKMSFEELCYKNPKMAIQKISDDYKIYCEKAPKIDFKM 612
++ +G + P+ +IT + F + + + + K E+ P + +
Sbjct: 310 EMHRGKKNEKNNKEIPITGKNITDLKFHSRVPRYTLSFLDQTKHEMKDK-ERQPFLVKQG 368
Query: 613 EIIKETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFREFLKERKAKIPL 672
II E + S+ N S+ ++ + + ++ V + + +E E L + PL
Sbjct: 369 SIISENEKTSKVN---SVTEQCVAKIQYLQNYLKESVQIQKKVMELESENLNLKSKMKPL 425
Query: 673 QFLTAVQKISIETNEKICKSLIENVIKTFFQGQLS-PEEMLQCDAPIIKEIASMRHVTTS 731
F T +ET EK K+L+E K+ Q +LS EE + K+I S +V
Sbjct: 426 IFTTQSLIQKVETYEKQLKNLVEE--KSTIQSKLSKTEEYSKECLKEFKKIISKYNVLQG 483
Query: 732 TLLTL-QGHVMKSIEEKWFKDYQDLFPPHHQEVEVQSEVQISSRKPSKI 779
TL + ++ S+E++ + D +E + QS++ I + + +++
Sbjct: 484 QNKTLEEKNIQLSLEKQQMMEALDQL--KSKEHKTQSDMAIVNNENNRM 530
>gi|22749515 coiled-coil domain containing 110 isoform a [Homo
sapiens]
Length = 833
Score = 32.3 bits (72), Expect = 2.5
Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 26/289 (8%)
Query: 508 QHKREFIGKEENI-------LLYKRIQQSLELSQALADMKEMDY-------RQWRKIATE 553
Q K FI KEEN+ + KRI + L + L +E R+ +K++
Sbjct: 288 QDKMNFI-KEENLDGNLNEDIKSKRISELEALVKKLLPFRETVSKFHVHFCRKCKKLSKS 346
Query: 554 DLKQGGSLQVELTS-PVFLTDITKMSFEELCYKNPKMAIQKISDDYKIYCEKAPKIDFKM 612
++ +G + P+ +IT + F + + + + K E+ P + +
Sbjct: 347 EMHRGKKNEKNNKEIPITGKNITDLKFHSRVPRYTLSFLDQTKHEMKDK-ERQPFLVKQG 405
Query: 613 EIIKETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFREFLKERKAKIPL 672
II E + S+ N S+ ++ + + ++ V + + +E E L + PL
Sbjct: 406 SIISENEKTSKVN---SVTEQCVAKIQYLQNYLKESVQIQKKVMELESENLNLKSKMKPL 462
Query: 673 QFLTAVQKISIETNEKICKSLIENVIKTFFQGQLS-PEEMLQCDAPIIKEIASMRHVTTS 731
F T +ET EK K+L+E K+ Q +LS EE + K+I S +V
Sbjct: 463 IFTTQSLIQKVETYEKQLKNLVEE--KSTIQSKLSKTEEYSKECLKEFKKIISKYNVLQG 520
Query: 732 TLLTL-QGHVMKSIEEKWFKDYQDLFPPHHQEVEVQSEVQISSRKPSKI 779
TL + ++ S+E++ + D +E + QS++ I + + +++
Sbjct: 521 QNKTLEEKNIQLSLEKQQMMEALDQL--KSKEHKTQSDMAIVNNENNRM 567
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 32.0 bits (71), Expect = 3.2
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 514 IGKEENILLYKRIQQSLELSQALADMKE-------------MDYRQWRKIATEDLKQGGS 560
I +E+ L ++R ++ LEL + + ++E DY Q + + ++L++ S
Sbjct: 793 INEEKCNLAFQRDEKVLELEKEIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQS 852
Query: 561 LQVELTSPVFLTDITKMSFEELCYKNPKMAIQ-----KISDDYKIYCEKAPKIDFKMEII 615
+ L S + K + E+ +N + IQ + +I+ EK + E +
Sbjct: 853 EKEALQSDLLEM---KNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENL 909
Query: 616 K---ETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFREFLKERKAKIPL 672
K E K + ++ LLK +L + PS++ L+ V + +E + KE++ KI
Sbjct: 910 KPLLEQKELRDRRAELILLKDSLAKSPSVKNDPLSSVKELEEKIENLEKECKEKEEKINK 969
Query: 673 QFLTAVQ-KISIETNEKICKSLIENV 697
L AV+ K ++++ K +++ E +
Sbjct: 970 IKLVAVKAKKELDSSRKETQTVKEEL 995
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 32.0 bits (71), Expect = 3.2
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 716 APIIKEIASMRHVTTSTLLTLQGHVM--KSIEEKWFKDYQDLFPPHHQEVEVQSEVQISS 773
A I +E S+ VT TLQ K I KWFKD Q+L ++ V V I
Sbjct: 4579 ATITEEAVSI-DVTQGDPATLQVKFSGTKEITAKWFKDGQELTLGSKYKISVTDTVSI-- 4635
Query: 774 RKPSKIVSTYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKRQEFEDYLHQEMQNSKENF 833
KI+ST ++S + + RS CK R +L+ F L ++M + K +F
Sbjct: 4636 ---LKIISTEKKDSGEYTFEVQNDVGRSSCKARINVLDLIIPPSFTKKL-KKMDSIKGSF 4691
Query: 834 TTAHNTSGRSAPPSTNVRSADQE 856
S P S DQE
Sbjct: 4692 IDLECIVAGSHPISIQWFKDDQE 4714
>gi|7019333 nuclear receptor binding protein [Homo sapiens]
Length = 535
Score = 32.0 bits (71), Expect = 3.2
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 274 AIGMPLQETCPQEKVV--IQMPSLKMASSKETRISSLEKDMHYAKISSMENKAKSHLHME 331
A G+P + QE+V + PS+K + + + + + + I S+E K HL +
Sbjct: 406 AFGLPRPQQPQQEEVTSPVVPPSVKTPTPEPAEVETRKVVLMQCNIESVEEGVKHHLTLL 465
Query: 332 APFETKVSTHL 342
E K++ HL
Sbjct: 466 LKLEDKLNRHL 476
>gi|4504063 golgin 97 [Homo sapiens]
Length = 767
Score = 31.6 bits (70), Expect = 4.2
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 507 RQHKREFIGKEENILLYKRIQQS--LELSQALADMKEMDYRQWRKIAT----EDL-KQGG 559
R+ + KE+ IL +R S L++ Q A+++ + + + A EDL + G
Sbjct: 515 REKTEVLLQKEQEILQLERGHNSALLQIHQLQAELEALRTLKAEEAAVVAEQEDLLRLRG 574
Query: 560 SLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKISD--DYKIYCEKAPKIDFKMEIIKE 617
LQ E S V + +T + ++ ++ P + + + K D + +++++
Sbjct: 575 PLQAEALS-VNESHVTSRAMQDPVFQLPTAGRTPNGEVGAMDLTQLQKEKQDLEQQLLEK 633
Query: 618 TKTVSRSNRKMSLLKRTLVRKPSMRPRN 645
KT+ + ++M L++TL ++ +RP N
Sbjct: 634 NKTIKQMQQRMLELRKTLQKELKIRPDN 661
>gi|14277690 hypothetical protein LOC9750 isoform 2 [Homo sapiens]
Length = 591
Score = 31.6 bits (70), Expect = 4.2
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 1011 FSSGGDNAILRFTLLRGIEWLQPQREAISS-VQNSSSSKLTQPRL 1054
FS GG N I+R G LQ +R +S ++NSS+ K Q +L
Sbjct: 8 FSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIENSSALKKPQAKL 52
>gi|164414421 hypothetical protein LOC9750 isoform 1 [Homo sapiens]
Length = 1068
Score = 31.6 bits (70), Expect = 4.2
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 1011 FSSGGDNAILRFTLLRGIEWLQPQREAISS-VQNSSSSKLTQPRL 1054
FS GG N I+R G LQ +R +S ++NSS+ K Q +L
Sbjct: 8 FSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIENSSALKKPQAKL 52
>gi|157671933 hypothetical protein LOC168090 [Homo sapiens]
Length = 469
Score = 31.6 bits (70), Expect = 4.2
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 470 KAQKEICKMLSPWYD-EFLDEEDYWFLLFT-----TQNRFISSRQHKREFIGKEENILLY 523
K +K+ C++LS W + + L++E L+ T T+NR I S +H+ + + EN++L
Sbjct: 391 KVEKKRCEILSKWDEIQALEKEIKTTLVHTGISDITENR-IKSIEHEAIQL-ETENMILK 448
Query: 524 KRIQQSLELSQALADMK 540
K+I+ LE+ Q + ++
Sbjct: 449 KKIKGPLEIYQGICKIR 465
>gi|4507943 exportin 1 [Homo sapiens]
Length = 1071
Score = 31.2 bits (69), Expect = 5.5
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 19/165 (11%)
Query: 25 FNTFLSLPVFGQTPFYTVENSQWSLWPEIPCNLIAKY-KGLL-------TWLEKCRLPFF 76
F+ ++ +G V ++W + P C I KY GL+ T +EK ++ +
Sbjct: 69 FSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKV-YI 127
Query: 77 CKTNLCFHYILCQE----FISFIKSPEGGEELVDFWILAENILSIDEMDLEVRDYYLSLL 132
K N+ IL QE + +FI G + + N++ + + EV D+ +
Sbjct: 128 GKLNMILVQILKQEWPKHWPTFISDIVGASRTSES-LCQNNMVILKLLSEEVFDFSSGQI 186
Query: 133 LMLRATHLQ-----EGSRVVTLCNMNIKSLLNLSIWHPNQSTTRR 172
+++ HL+ E S++ LC +++ N + H T R
Sbjct: 187 TQVKSKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLR 231
>gi|146260271 hypothetical protein LOC129881 [Homo sapiens]
Length = 552
Score = 31.2 bits (69), Expect = 5.5
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 516 KEENILLYKRIQQSLELSQALADMKEMDYRQW-RKIATEDLKQGGSLQVE----LTSPVF 570
KE+ + K+ + +E + + D++E Y+Q RK A E+ KQ Q E S +
Sbjct: 101 KEQKLEAKKKRDEEIEAERQILDLEEEIYKQGKRKKAIENAKQYQFYQTERVKNFHSGLL 160
Query: 571 LTDITKMSFEELCYKNPKM-AIQKISDDYKIYCEKAPKIDFKMEIIKETKTVSRSNRKMS 629
L+ + K ++ ++ K+ + +K + K+ EKA FK E + K R +++
Sbjct: 161 LSRVMKERDAQIEFRKSKIKSDKKWEEQLKLNIEKA----FKEE---QEKAEKRHRERVA 213
Query: 630 LLK 632
L K
Sbjct: 214 LAK 216
>gi|39995084 integrator complex subunit 3 [Homo sapiens]
Length = 1042
Score = 31.2 bits (69), Expect = 5.5
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 509 HKREFIGKEENILLYKRIQQSLELSQALADMKEMDYRQWRKIATEDLKQGGS-----LQV 563
H R+ + N ++ KR+ L L D ++D ++ R + E + S ++V
Sbjct: 451 HVRQGVFSSLNHIVEKRVLAHLA---PLFDNPKLD-KELRAMLREKFPEFCSSPSPPVEV 506
Query: 564 ELTSPVFLTDITKMSF-EELCYKNPKMAIQKISDDYKIYCEKAPKIDFKMEIIKETKTVS 622
++ PV + MS +E CY N + A SDD + K K +F+ IKET
Sbjct: 507 KIEEPVSMEMDNHMSDKDESCYDNAEAAF---SDDEEDLNSKGKKREFRFHPIKET---- 559
Query: 623 RSNRKMSLLKRTLVRKPSMRPRNLTEV--LLNTQHLEFFREFLKERKAKIPLQFLTAVQK 680
+V +P L ++ L + L+ + E + ++ + + V +
Sbjct: 560 ------------VVEEPVDITPYLDQLDESLRDKVLQLQKGSDTEAQCEVMQEIVDQVLE 607
Query: 681 ISIETNE-KICKSLIENVIKTFFQGQLSPEEMLQ 713
++ + + S ++ + K F+G++ PEE+ +
Sbjct: 608 EDFDSEQLSVLASCLQELFKAHFRGEVLPEEITE 641
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 30.8 bits (68), Expect = 7.2
Identities = 34/186 (18%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 493 WFLLFTTQNRFISSRQHKREFIGKEENILLYKRIQ-------QSLELSQALADMKEMDYR 545
W+ LFT + + + E + KEE ++ + Q +E Q+ +++ +
Sbjct: 827 WWRLFTKVKPLLQVSRQEEEMMAKEEELVKVREKQLAAENRLTEMETLQSQLMAEKLQLQ 886
Query: 546 QWRKIATEDLKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKISDDYKIYCEKA 605
+ + TE + L+ LT+ K EE+C+ ++ + EK
Sbjct: 887 EQLQAETELCAEAEELRARLTA-------KKQELEEICHDLEARVEEEEERCQHLQAEKK 939
Query: 606 PKIDFKMEIIKETKTVSRSNRKMSLLKRTLVRKPSMRPRNLTEVLLNTQHLEFFRE--FL 663
E+ ++ + + +K+ L K T K ++ +++L Q+ + +E L
Sbjct: 940 KMQQNIQELEEQLEEEESARQKLQLEKVTTEAK--LKKLEEEQIILEDQNCKLAKEKKLL 997
Query: 664 KERKAK 669
++R A+
Sbjct: 998 EDRIAE 1003
>gi|5031877 lamin B1 [Homo sapiens]
Length = 586
Score = 30.8 bits (68), Expect = 7.2
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 646 LTEVLLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIETNEKI-----CKSLIENVI-- 698
L L + + LE E LK++ A++ A ++++ ET K+ C+SL E++
Sbjct: 149 LATALGDKKSLEGDLEDLKDQIAQLEASLAAAKKQLADETLLKVDLENRCQSLTEDLEFR 208
Query: 699 KTFFQGQLSPEEMLQCDAPIIKEIASMRHVTTSTLLTLQGHVMKSIEEKWFKDY-QDLFP 757
K+ ++ +++ E + + E+ S R + L H M+ + + Y ++L
Sbjct: 209 KSMYEEEIN--ETRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDAQVRLYKEELEQ 266
Query: 758 PHHQEVEVQSEVQISSRKPSKIVSTYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKR-Q 816
+H ++E ++SS + V++ +E + MR+ S ++ +R Q
Sbjct: 267 TYHAKLE---NARLSSEMNTSTVNSAREELMESR-MRIESLSSQLSNLQKESRACLERIQ 322
Query: 817 EFEDYLHQEMQNSKENFT 834
E ED L +E NS+ T
Sbjct: 323 ELEDLLAKEKDNSRRMLT 340
>gi|239754359 PREDICTED: similar to heat shock 70kD protein binding
protein [Homo sapiens]
Length = 204
Score = 30.8 bits (68), Expect = 7.2
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 13/131 (9%)
Query: 650 LLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQLSPE 709
+L+T+ + F RE+++ K+P A QK E N K K + V + + S E
Sbjct: 22 ILHTEEMHFLREWVESMGGKVP----PATQKAKSEENTKEEKPDSKKVEEDLKADEPSSE 77
Query: 710 E---------MLQCDAPIIKEIASMRHVTTSTLLTLQGHVMKSIEEKWFKDYQDLFPPHH 760
E +++ D +E+ R ST+ T + +S ++ F +F
Sbjct: 78 ESDLEIDKEGVIEPDTDAPQEMGDGRKAPDSTVQTAPRSLPRSAQQPRFSQNTGIFSGRR 137
Query: 761 QEVEVQSEVQI 771
+++ I
Sbjct: 138 SNQKMEMNFNI 148
>gi|239748906 PREDICTED: hypothetical protein XP_002346852 [Homo
sapiens]
Length = 204
Score = 30.8 bits (68), Expect = 7.2
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 13/131 (9%)
Query: 650 LLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQLSPE 709
+L+T+ + F RE+++ K+P A QK E N K K + V + + S E
Sbjct: 22 ILHTEEMHFLREWVESMGGKVP----PATQKAKSEENTKEEKPDSKKVEEDLKADEPSSE 77
Query: 710 E---------MLQCDAPIIKEIASMRHVTTSTLLTLQGHVMKSIEEKWFKDYQDLFPPHH 760
E +++ D +E+ R ST+ T + +S ++ F +F
Sbjct: 78 ESDLEIDKEGVIEPDTDAPQEMGDGRKAPDSTVQTAPRSLPRSAQQPRFSQNTGIFSGRR 137
Query: 761 QEVEVQSEVQI 771
+++ I
Sbjct: 138 SNQKMEMNFNI 148
>gi|239742930 PREDICTED: hypothetical protein XP_002342689 [Homo
sapiens]
Length = 204
Score = 30.8 bits (68), Expect = 7.2
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 13/131 (9%)
Query: 650 LLNTQHLEFFREFLKERKAKIPLQFLTAVQKISIETNEKICKSLIENVIKTFFQGQLSPE 709
+L+T+ + F RE+++ K+P A QK E N K K + V + + S E
Sbjct: 22 ILHTEEMHFLREWVESMGGKVP----PATQKAKSEENTKEEKPDSKKVEEDLKADEPSSE 77
Query: 710 E---------MLQCDAPIIKEIASMRHVTTSTLLTLQGHVMKSIEEKWFKDYQDLFPPHH 760
E +++ D +E+ R ST+ T + +S ++ F +F
Sbjct: 78 ESDLEIDKEGVIEPDTDAPQEMGDGRKAPDSTVQTAPRSLPRSAQQPRFSQNTGIFSGRR 137
Query: 761 QEVEVQSEVQI 771
+++ I
Sbjct: 138 SNQKMEMNFNI 148
>gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens]
Length = 520
Score = 30.8 bits (68), Expect = 7.2
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 549 KIATEDLKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKI------SDDYKIYC 602
K+ DL GS+ + V L ++ SFE+ ++ P + D +K YC
Sbjct: 120 KVKGVDLDAPGSI-----NGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYC 174
Query: 603 EKAPKIDFKMEIIKETKTVSR 623
EK +I +E+I T T ++
Sbjct: 175 EKQKRIRMGLEVIPVTSTTNK 195
>gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens]
Length = 588
Score = 30.8 bits (68), Expect = 7.2
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 549 KIATEDLKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKI------SDDYKIYC 602
K+ DL GS+ + V L ++ SFE+ ++ P + D +K YC
Sbjct: 120 KVKGVDLDAPGSI-----NGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYC 174
Query: 603 EKAPKIDFKMEIIKETKTVSR 623
EK +I +E+I T T ++
Sbjct: 175 EKQKRIRMGLEVIPVTSTTNK 195
>gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens]
Length = 594
Score = 30.8 bits (68), Expect = 7.2
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 549 KIATEDLKQGGSLQVELTSPVFLTDITKMSFEELCYKNPKMAIQKI------SDDYKIYC 602
K+ DL GS+ + V L ++ SFE+ ++ P + D +K YC
Sbjct: 135 KVKGVDLDAPGSI-----NGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYC 189
Query: 603 EKAPKIDFKMEIIKETKTVSR 623
EK +I +E+I T T ++
Sbjct: 190 EKQKRIRMGLEVIPVTSTTNK 210
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,774,118
Number of Sequences: 37866
Number of extensions: 1660364
Number of successful extensions: 4223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 4190
Number of HSP's gapped (non-prelim): 69
length of query: 1076
length of database: 18,247,518
effective HSP length: 113
effective length of query: 963
effective length of database: 13,968,660
effective search space: 13451819580
effective search space used: 13451819580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.