Guide to the Human Genome
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Name: EXOC6 Sequence: fasta or formatted (804aa) NCBI GI: 65507403
Description:

SEC15-like 1 isoform a

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [799aa] SEC15-like 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         35           2
 C cysteine            1.6         13           1
 D aspartate           6.2         50           2
 E glutamate           8.0         64           3
 F phenylalanine       4.9         39           2
 G glycine             3.0         24           1
 H histidine           2.9         23           2
 I isoleucine          6.2         50           3
 K lysine              7.1         57           2
 L leucine            10.8         87           3
 M methionine          3.1         25           1
 N asparagine          4.4         35           2
 P proline             3.1         25           1
 Q glutamine           6.3         51           2
 R arginine            5.0         40           2
 S serine              6.3         51           2
 T threonine           6.2         50           2
 V valine              6.2         50           2
 W tryptophan          0.7          6           1
 Y tyrosine            3.6         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SEC15-like 1 isoform a 
EXOC6                 0.965   SEC15-like 1 isoform b 
EXOC6B                0.721   SEC15-like 2 
KTN1                  0.014   kinectin 1 isoform a 
KTN1                  0.014   kinectin 1 isoform c 
KTN1                  0.014   kinectin 1 isoform a 
C14orf38              0.014   PREDICTED: hypothetical protein 
C14orf38              0.014   PREDICTED: hypothetical protein 
C14orf38              0.014   PREDICTED: hypothetical protein 
KTN1                  0.011   kinectin 1 isoform b 
CEP70                 0.009   centrosomal protein 70 kDa 
MYH10                 0.008   myosin, heavy polypeptide 10, non-muscle 
FOLH1                 0.008   folate hydrolase 1 isoform 1 
FOLH1                 0.008   folate hydrolase 1 isoform 2 
ERC1                  0.008   RAB6-interacting protein 2 isoform delta 
TRAF5                 0.008   TNF receptor-associated factor 5 
TRAF5                 0.008   TNF receptor-associated factor 5 
TRAF5                 0.008   TNF receptor-associated factor 5 
KIF20B                0.008   M-phase phosphoprotein 1 
CCDC62                0.008   coiled-coil domain containing 62 isoform b 
CCDC62                0.008   coiled-coil domain containing 62 isoform a 
FOLH1B                0.007   folate hydrolase 1B 
STAMBPL1              0.007   STAM binding protein-like 1 
RB1CC1                0.007   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.007   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
MYH6                  0.007   myosin heavy chain 6 
CEP110                0.007   centrosomal protein 110kDa 
ZNF853                0.006   zinc finger protein 853 
KIF3A                 0.006   kinesin family member 3A 
TRAIP                 0.006   TRAF interacting protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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