Guide to the Human Genome
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Name: EXOC6 Sequence: fasta or formatted (799aa) NCBI GI: 62243652
Description:

SEC15-like 1 isoform b

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [804aa] SEC15-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         35           2
 C cysteine            1.5         12           1
 D aspartate           6.3         50           2
 E glutamate           8.1         65           3
 F phenylalanine       5.0         40           2
 G glycine             2.8         22           1
 H histidine           2.8         22           2
 I isoleucine          6.1         49           3
 K lysine              7.1         57           2
 L leucine            11.0         88           3
 M methionine          3.1         25           1
 N asparagine          4.4         35           2
 P proline             3.0         24           1
 Q glutamine           6.5         52           2
 R arginine            4.9         39           2
 S serine              6.1         49           2
 T threonine           6.1         49           2
 V valine              6.3         50           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.8         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SEC15-like 1 isoform b 
EXOC6                 0.972   SEC15-like 1 isoform a 
EXOC6B                0.703   SEC15-like 2 
KTN1                  0.015   kinectin 1 isoform a 
KTN1                  0.015   kinectin 1 isoform c 
KTN1                  0.015   kinectin 1 isoform a 
C14orf38              0.014   PREDICTED: hypothetical protein 
C14orf38              0.014   PREDICTED: hypothetical protein 
C14orf38              0.014   PREDICTED: hypothetical protein 
KTN1                  0.012   kinectin 1 isoform b 
CEP70                 0.009   centrosomal protein 70 kDa 
FOLH1                 0.008   folate hydrolase 1 isoform 1 
FOLH1                 0.008   folate hydrolase 1 isoform 2 
ERC1                  0.008   RAB6-interacting protein 2 isoform delta 
CCDC91                0.008   GGA binding partner 
KIF20B                0.008   M-phase phosphoprotein 1 
CCDC62                0.008   coiled-coil domain containing 62 isoform b 
CCDC62                0.008   coiled-coil domain containing 62 isoform a 
MYH2                  0.008   myosin, heavy chain 2, skeletal muscle, adult [Homo...
FOLH1B                0.007   folate hydrolase 1B 
STAMBPL1              0.007   STAM binding protein-like 1 
RB1CC1                0.007   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.007   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
MYH6                  0.007   myosin heavy chain 6 
MYH8                  0.007   myosin, heavy chain 8, skeletal muscle, perinatal [...
NASP                  0.006   nuclear autoantigenic sperm protein isoform 3 
KIF3A                 0.006   kinesin family member 3A 
TRAIP                 0.006   TRAF interacting protein 
CCDC88A               0.006   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.006   coiled-coil domain containing 88A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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