Guide to the Human Genome
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Name: ZNF836 Sequence: fasta or formatted (936aa) NCBI GI: 156627573
Description:

zinc finger protein 836

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.1         20           1
 C cysteine            6.3         59           1
 D aspartate           1.8         17           1
 E glutamate           6.7         63           2
 F phenylalanine       4.1         38           1
 G glycine             7.3         68           2
 H histidine           6.2         58           1
 I isoleucine          4.7         44           2
 K lysine             10.4         97           2
 L leucine             6.3         59           2
 M methionine          1.0          9           1
 N asparagine          6.0         56           2
 P proline             3.7         35           2
 Q glutamine           5.4         51           1
 R arginine            5.7         53           2
 S serine              7.1         66           3
 T threonine           6.6         62           2
 V valine              4.2         39           1
 W tryptophan          0.3          3           1
 Y tyrosine            4.2         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 836 
ZNF841                0.610   zinc finger protein 841 
ZNF845                0.544   zinc finger protein 845 
ZNF616                0.532   zinc finger protein 616 
ZNF808                0.490   zinc finger protein 808 
ZNF160                0.482   zinc finger protein 160 
ZNF160                0.482   zinc finger protein 160 
ZNF160                0.482   zinc finger protein 160 
ZNF347                0.481   zinc finger protein 347 
ZNF208                0.465   zinc finger protein 208 
ZNF91                 0.463   zinc finger protein 91 
ZNF99                 0.458   zinc finger protein 99 
LOC100292052          0.447   PREDICTED: similar to hCG1773661 
LOC100287226          0.447   PREDICTED: similar to hCG1773661 
LOC100287226          0.447   PREDICTED: hypothetical protein XP_002343677 
ZNF665                0.431   zinc finger protein 665 
ZNF721                0.420   zinc finger protein 721 
ZNF761                0.414   zinc finger protein 761 
ZFP62                 0.410   zinc finger protein 62 homolog 
ZNF107                0.409   zinc finger protein 107 
ZNF107                0.409   zinc finger protein 107 
ZNF268                0.398   zinc finger protein 268 
LOC388559             0.393   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.393   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.393   PREDICTED: hypothetical protein LOC388559 
ZNF43                 0.386   zinc finger protein 43 
ZNF658                0.385   zinc finger protein 658 
ZNF546                0.379   zinc finger protein 546 
ZNF624                0.375   zinc finger protein 624 
ZNF600                0.369   zinc finger protein 600 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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