Guide to the Human Genome
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Name: SERPINE1 Sequence: fasta or formatted (402aa) NCBI GI: 10835159
Description:

plasminogen activator inhibitor-1

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         29           2
 C cysteine            0.2          1           1
 D aspartate           5.0         20           2
 E glutamate           4.7         19           2
 F phenylalanine       6.2         25           2
 G glycine             5.7         23           2
 H histidine           3.2         13           2
 I isoleucine          3.7         15           2
 K lysine              4.7         19           1
 L leucine            10.4         42           2
 M methionine          4.5         18           2
 N asparagine          3.2         13           1
 P proline             5.5         22           2
 Q glutamine           5.5         22           3
 R arginine            4.5         18           2
 S serine              7.0         28           3
 T threonine           6.7         27           2
 V valine              8.7         35           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.2          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   plasminogen activator inhibitor-1 
SERPINE2              0.354   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.354   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.354   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.347   plasminogen activator inhibitor type 1, member 2 iso...
SERPINI1              0.263   neuroserpin precursor 
SERPINI1              0.263   neuroserpin precursor 
SERPINI2              0.233   serpin peptidase inhibitor, clade I (pancpin), member...
SERPINE3              0.210   nexin-related serine protease inhibitor 
SERPINB8              0.202   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB8              0.202   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINC1              0.199   serpin peptidase inhibitor, clade C, member 1 
SERPINB4              0.199   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB1              0.198   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB11             0.194   serpin peptidase inhibitor, clade B, member 11 [Hom...
SERPINB6              0.193   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB3              0.190   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB2              0.188   serine (or cysteine) proteinase inhibitor, clade B ...
SERPINB2              0.188   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA1              0.187   serine proteinase inhibitor, clade A, member 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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