Guide to the Human Genome
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Name: RPL22 Sequence: fasta or formatted (128aa) NCBI GI: 4506613
Description:

ribosomal protein L22 proprotein

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          5           2
 C cysteine            0.8          1           1
 D aspartate           5.5          7           1
 E glutamate          10.2         13           5
 F phenylalanine       3.9          5           1
 G glycine             6.2          8           3
 H histidine           0.8          1           1
 I isoleucine          3.9          5           1
 K lysine             14.8         19           4
 L leucine             8.6         11           1
 M methionine          1.6          2           1
 N asparagine          5.5          7           2
 P proline             2.3          3           1
 Q glutamine           3.9          5           1
 R arginine            4.7          6           1
 S serine              4.7          6           1
 T threonine           4.7          6           1
 V valine              9.4         12           2
 W tryptophan          0.8          1           1
 Y tyrosine            3.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L22 proprotein 
RPL22L1               0.647   ribosomal protein L22-like 1 
RGSL1                 0.034   regulator of G-protein signaling like 1 
CLSTN1                0.022   calsyntenin 1 isoform 1 
CLSTN1                0.022   calsyntenin 1 isoform 2 
PIK3R1                0.009   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.009   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.009   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
EHMT2                 0.009   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.009   euchromatic histone-lysine N-methyltransferase 2 is...
USP28                 0.009   ubiquitin specific protease 28 
POLR3C                0.009   polymerase (RNA) III (DNA directed) polypeptide C (6...
PIK3R5                0.009   phosphoinositide-3-kinase, regulatory subunit 5 [Ho...
PIK3R5                0.009   phosphoinositide-3-kinase, regulatory subunit 5 [Ho...
PIK3R2                0.009   phosphoinositide-3-kinase, regulatory subunit 2 (beta...
ERCC6                 0.009   excision repair cross-complementing rodent repair def...
LMOD3                 0.009   leiomodin 3 (fetal) 
RREB1                 0.004   ras responsive element binding protein 1 isoform 2 [...
RREB1                 0.004   ras responsive element binding protein 1 isoform 1 [...
DAXX                  0.004   death-domain associated protein isoform a 
DAXX                  0.004   death-domain associated protein isoform a 
DAXX                  0.004   death-domain associated protein isoform b 
PPP1R10               0.004   protein phosphatase 1, regulatory subunit 10 
EIF2AK3               0.004   eukaryotic translation initiation factor 2-alpha ki...
ZC3H15                0.004   erythropoietin 4 immediate early response 
ZC3H6                 0.004   zinc finger CCCH-type domain containing 6 
ZBTB9                 0.004   zinc finger and BTB domain containing 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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