Guide to the Human Genome
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Name: XPO1 Sequence: fasta or formatted (1071aa) NCBI GI: 4507943
Description:

exportin 1

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         58           3
 C cysteine            1.9         20           1
 D aspartate           4.5         48           2
 E glutamate           7.4         79           2
 F phenylalanine       5.2         56           2
 G glycine             3.5         37           2
 H histidine           3.0         32           1
 I isoleucine          7.1         76           2
 K lysine              5.8         62           2
 L leucine            11.6        124           3
 M methionine          3.6         39           2
 N asparagine          5.6         60           2
 P proline             3.7         40           2
 Q glutamine           6.2         66           2
 R arginine            3.6         39           2
 S serine              5.1         55           2
 T threonine           5.7         61           1
 V valine              7.2         77           2
 W tryptophan          1.2         13           1
 Y tyrosine            2.7         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exportin 1 
XPO5                  0.023   exportin 5 
IPO13                 0.022   importin 13 
XPO6                  0.009   exportin 6 
TNPO2                 0.006   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.006   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.006   transportin 2 (importin 3, karyopherin beta 2b) isof...
CSE1L                 0.006   CSE1 chromosome segregation 1-like protein 
TNPO1                 0.005   transportin 1 isoform 2 
TNPO1                 0.005   transportin 1 isoform 1 
TNPO3                 0.005   transportin 3 
EFTUD1                0.004   elongation factor Tu GTP binding domain containing 1...
EFTUD1                0.004   elongation factor Tu GTP binding domain containing 1...
ANAPC4                0.003   anaphase-promoting complex subunit 4 
XPO7                  0.003   exportin 7 isoform c 
XPO7                  0.003   exportin 7 isoform b 
DUSP13                0.003   testis and skeletal muscle-specific dual specificity...
DUSP13                0.003   testis and skeletal muscle-specific dual specificity...
DUSP13                0.003   testis and skeletal muscle-specific dual specificity...
RGSL1                 0.003   regulator of G-protein signaling like 1 
KIF9                  0.002   kinesin family member 9 isoform 1 
BTAF1                 0.002   BTAF1 RNA polymerase II, B-TFIID transcription facto...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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