Guide to the Human Genome
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Name: ZNF385A Sequence: fasta or formatted (305aa) NCBI GI: 195972905
Description:

zinc finger protein 385A isoform b

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [386aa] zinc finger protein 385A isoform a
alt prot [366aa] zinc finger protein 385A isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         30           4
 C cysteine            1.3          4           1
 D aspartate           2.0          6           1
 E glutamate           3.9         12           1
 F phenylalanine       2.3          7           1
 G glycine             9.5         29           2
 H histidine           3.6         11           1
 I isoleucine          4.6         14           1
 K lysine              5.6         17           2
 L leucine            11.1         34           2
 M methionine          1.3          4           1
 N asparagine          2.6          8           1
 P proline            14.8         45           2
 Q glutamine           3.6         11           1
 R arginine            6.9         21           2
 S serine              6.9         21           2
 T threonine           4.9         15           1
 V valine              3.9         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 385A isoform b 
ZNF385A               0.893   zinc finger protein 385A isoform a 
ZNF385A               0.830   zinc finger protein 385A isoform c 
ZNF385D               0.302   zinc finger protein 385D 
ZNF385B               0.245   zinc finger protein 385B isoform 2 
ZNF385B               0.245   zinc finger protein 385B isoform 1 
ZNF385B               0.238   zinc finger protein 385B isoform 3 
ZNF385C               0.207   PREDICTED: zinc finger protein 385C 
ZNF385C               0.207   PREDICTED: zinc finger protein 385C 
ZNF385C               0.207   PREDICTED: zinc finger protein 385C 
ZMAT3                 0.047   p53 target zinc finger protein isoform 2 
ZMAT3                 0.045   p53 target zinc finger protein isoform 1 
ZFHX2                 0.033   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.033   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.033   PREDICTED: zinc finger homeobox 2 
ZMAT4                 0.030   zinc finger, matrin type 4 isoform a 
ZNF346                0.028   zinc finger protein 346 
KDM6B                 0.028   lysine (K)-specific demethylase 6B 
ZFR2                  0.025   zinc finger RNA binding protein 2 isoform 1 
PPRC1                 0.025   peroxisome proliferator-activated receptor gamma, co...
ZNF574                0.023   zinc finger protein 574 
NKX1-1                0.022   PREDICTED: NK1 homeobox 1 
ZFHX4                 0.022   zinc finger homeodomain 4 
ZMAT4                 0.022   zinc finger, matrin type 4 isoform b 
CIC                   0.022   capicua homolog 
GGN                   0.022   gametogenetin 
C16orf88              0.020   hypothetical protein LOC400506 
LOC100133142          0.020   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.020   PREDICTED: similar to zinc finger protein 208 [Homo...
SCAPER                0.020   S-phase cyclin A-associated protein in the ER isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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