Guide to the Human Genome
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Name: ASB15 Sequence: fasta or formatted (588aa) NCBI GI: 92087060
Description:

ankyrin repeat and SOCS box-containing 15

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         43           2
 C cysteine            2.9         17           1
 D aspartate           6.1         36           2
 E glutamate           6.8         40           2
 F phenylalanine       2.6         15           1
 G glycine             6.5         38           3
 H histidine           3.6         21           1
 I isoleucine          5.3         31           1
 K lysine              5.8         34           2
 L leucine            12.9         76           3
 M methionine          1.9         11           1
 N asparagine          4.9         29           2
 P proline             4.9         29           2
 Q glutamine           3.7         22           2
 R arginine            3.7         22           2
 S serine              4.6         27           1
 T threonine           3.9         23           1
 V valine              7.5         44           2
 W tryptophan          1.4          8           1
 Y tyrosine            3.7         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing 15 
ASB14                 0.365   ankyrin repeat and SOCS box-containing 14 isoform 1...
ASB14                 0.260   ankyrin repeat and SOCS box-containing 14 isoform 2 ...
ASB2                  0.254   ankyrin repeat and SOCS box-containing protein 2 [Ho...
ASB3                  0.139   ankyrin repeat and SOCS box-containing protein 3 isof...
ASB3                  0.114   ankyrin repeat and SOCS box-containing protein 3 iso...
ANK3                  0.106   ankyrin 3 isoform 1 
ANK2                  0.103   ankyrin 2 isoform 2 
ANK2                  0.103   ankyrin 2 isoform 1 
ANK2                  0.100   ankyrin 2 isoform 3 
ANK1                  0.097   ankyrin 1 isoform 9 
ANK1                  0.097   ankyrin 1 isoform 1 
ANK1                  0.097   ankyrin 1 isoform 3 
ANK1                  0.097   ankyrin 1 isoform 2 
ANK1                  0.097   ankyrin 1 isoform 4 
ANKRD52               0.089   ankyrin repeat domain 52 
ANKRD50               0.086   ankyrin repeat domain 50 
ANKRD28               0.081   ankyrin repeat domain 28 
KIDINS220             0.080   kinase D-interacting substrate of 220 kDa 
ANKDD1A               0.079   ankyrin repeat and death domain containing 1A 
ANKRD44               0.076   ankyrin repeat domain 44 
RIPK4                 0.076   ankyrin repeat domain 3 
INVS                  0.075   inversin isoform a 
INVS                  0.075   inversin isoform b 
ANKRD17               0.075   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.075   ankyrin repeat domain protein 17 isoform b 
ANKK1                 0.069   ankyrin repeat and kinase domain containing 1 
ANKHD1                0.068   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.068   ANKHD1-EIF4EBP3 protein 
ANKRD29               0.068   ankyrin repeat domain 29 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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