TMEM108 12566

Name: TMEM108	Sequence: fasta or formatted (575aa)		NCBI GI: 210147493
Description: transmembrane protein 108		Not currently referenced in the text
Other entries for this name: alt mRNA {575aa} transmembrane protein 108
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 55 3 C cysteine 1.0 6 2 D aspartate 2.6 15 1 E glutamate 3.7 21 2 F phenylalanine 1.9 11 1 G glycine 7.7 44 3 H histidine 2.3 13 2 I isoleucine 3.1 18 1 K lysine 3.1 18 3 L leucine 6.4 37 2 M methionine 1.7 10 1 N asparagine 3.0 17 2 P proline 13.0 75 2 Q glutamine 4.2 24 1 R arginine 5.4 31 2 S serine 11.8 68 3 T threonine 12.2 70 3 V valine 5.2 30 2 W tryptophan 1.0 6 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 108 TMEM108 1.000 transmembrane protein 108 MUC2 0.061 mucin 2 precursor LOC100294420 0.058 PREDICTED: similar to mucin 2 NACA 0.054 nascent polypeptide-associated complex alpha subuni... MUC12 0.047 PREDICTED: mucin 12 FLJ22184 0.043 PREDICTED: hypothetical protein FLJ22184 LOC100133756 0.043 PREDICTED: hypothetical protein, partial MUC17 0.043 mucin 17 MUC12 0.043 PREDICTED: mucin 12, cell surface associated MUC5B 0.043 mucin 5, subtype B, tracheobronchial FLJ22184 0.041 PREDICTED: hypothetical protein LOC80164 MUC5AC 0.040 mucin 5AC MUC7 0.040 mucin 7, secreted precursor MUC7 0.040 mucin 7, secreted precursor MUC7 0.040 mucin 7, secreted precursor PRG4 0.039 proteoglycan 4 isoform D PRG4 0.039 proteoglycan 4 isoform C PRG4 0.039 proteoglycan 4 isoform B PRG4 0.039 proteoglycan 4 isoform A FLJ22184 0.039 PREDICTED: hypothetical protein FLJ22184 LOC100288540 0.039 PREDICTED: hypothetical protein XP_002342775 POM121C 0.039 POM121 membrane glycoprotein (rat)-like ARHGAP17 0.037 nadrin isoform 1 MAGEE1 0.035 melanoma antigen family E, 1 LOC100130716 0.035 PREDICTED: similar to mucin 11 MUC4 0.035 mucin 4 isoform a LOC284297 0.034 hypothetical protein LOC284297 LOC100130716 0.034 PREDICTED: similar to Mucin-12 ATN1 0.034 atrophin-1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.