Guide to the Human Genome
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Name: CCND3 Sequence: fasta or formatted (96aa) NCBI GI: 209915556
Description:

cyclin D3 isoform 4

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [211aa] cyclin D3 isoform 1
alt prot [220aa] cyclin D3 isoform 3
alt prot [292aa] cyclin D3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5         12           2
 C cysteine            3.1          3           1
 D aspartate           3.1          3           1
 E glutamate           7.3          7           1
 F phenylalanine       0.0          0           0
 G glycine             9.4          9           1
 H histidine           1.0          1           1
 I isoleucine          5.2          5           1
 K lysine              1.0          1           1
 L leucine             8.3          8           2
 M methionine          3.1          3           1
 N asparagine          0.0          0           0
 P proline             7.3          7           2
 Q glutamine           6.2          6           1
 R arginine            4.2          4           1
 S serine             14.6         14           3
 T threonine           9.4          9           1
 V valine              3.1          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin D3 isoform 4 
CCND3                 1.000   cyclin D3 isoform 1 
CCND3                 1.000   cyclin D3 isoform 3 
CCND3                 1.000   cyclin D3 isoform 2 
CCND2                 0.390   cyclin D2 
CCND1                 0.268   cyclin D1 
TCERG1                0.043   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.043   transcription elongation regulator 1 isoform 1 [Homo...
TIAM2                 0.037   T-cell lymphoma invasion and metastasis 2 isoform a ...
TMEM184A              0.030   transmembrane protein 184A 
PRKCSH                0.030   protein kinase C substrate 80K-H isoform 2 
PRKCSH                0.030   protein kinase C substrate 80K-H isoform 1 
ASXL3                 0.024   additional sex combs like 3 
LOC100293526          0.024   PREDICTED: hypothetical protein 
LOC100291411          0.024   PREDICTED: hypothetical protein XP_002348184 
LOC100288664          0.024   PREDICTED: hypothetical protein XP_002343845 
PTPRG                 0.024   protein tyrosine phosphatase, receptor type, G prec...
ADRM1                 0.024   adhesion regulating molecule 1 precursor 
ADRM1                 0.024   adhesion regulating molecule 1 precursor 
TGOLN2                0.024   trans-golgi network protein 2 
CCDC69                0.024   coiled-coil domain containing 69 
GAP43                 0.024   growth associated protein 43 isoform 1 
GAP43                 0.024   growth associated protein 43 isoform 2 
IFI27                 0.018   interferon, alpha-inducible protein 27 isoform 2 [Ho...
IFI27                 0.018   interferon, alpha-inducible protein 27 isoform 1 [H...
TBC1D16               0.018   TBC1 domain family, member 16 
GLTSCR1               0.018   glioma tumor suppressor candidate region gene 1 [Ho...
ARID3B                0.018   AT rich interactive domain 3B 
TRUB2                 0.018   TruB pseudouridine (psi) synthase homolog 2 
LOC388630             0.018   PREDICTED: UPF0632 protein A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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