Guide to the Human Genome
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Name: CCDC69 Sequence: fasta or formatted (296aa) NCBI GI: 45935391
Description:

coiled-coil domain containing 69

Referenced in:

Coiled-Coil Proteins
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         16           1
 C cysteine            1.0          3           1
 D aspartate           3.0          9           1
 E glutamate          15.9         47           3
 F phenylalanine       2.0          6           1
 G glycine             2.0          6           1
 H histidine           3.0          9           1
 I isoleucine          3.7         11           1
 K lysine              7.1         21           3
 L leucine            12.5         37           3
 M methionine          1.4          4           1
 N asparagine          2.7          8           1
 P proline             4.7         14           2
 Q glutamine           9.1         27           2
 R arginine            8.4         25           2
 S serine              6.4         19           2
 T threonine           4.7         14           2
 V valine              4.7         14           2
 W tryptophan          0.7          2           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 69 
KIAA0774              0.201   hypothetical protein LOC23281 isoform b 
KIAA0774              0.201   hypothetical protein LOC23281 isoform a 
MTUS1                 0.156   mitochondrial tumor suppressor 1 isoform 5 
MTUS1                 0.156   mitochondrial tumor suppressor 1 isoform 1 
MTUS1                 0.156   mitochondrial tumor suppressor 1 isoform 2 
MTUS1                 0.156   mitochondrial tumor suppressor 1 isoform 4 
TCHH                  0.070   trichohyalin 
KIAA1524              0.066   p90 autoantigen 
ZNF853                0.061   zinc finger protein 853 
GOLGA3                0.057   Golgi autoantigen, golgin subfamily a, 3 
CCDC64                0.054   coiled-coil domain containing 64 
ITSN1                 0.054   intersectin 1 isoform ITSN-s 
ITSN1                 0.054   intersectin 1 isoform ITSN-l 
LOC100133758          0.052   PREDICTED: hypothetical protein, partial 
TCHP                  0.052   trichoplein 
TCHP                  0.052   trichoplein 
DST                   0.052   dystonin isoform 1e precursor 
ITSN2                 0.052   intersectin 2 isoform 3 
ITSN2                 0.052   intersectin 2 isoform 1 
ITSN2                 0.052   intersectin 2 isoform 2 
LOC100133220          0.052   PREDICTED: hypothetical protein 
DSP                   0.050   desmoplakin isoform I 
RNF20                 0.050   ring finger protein 20 
PLEC1                 0.050   plectin 1 isoform 11 
PLEC1                 0.050   plectin 1 isoform 10 
PLEC1                 0.050   plectin 1 isoform 8 
PLEC1                 0.050   plectin 1 isoform 7 
PLEC1                 0.050   plectin 1 isoform 6 
PLEC1                 0.050   plectin 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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