Guide to the Human Genome
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Name: CCND2 Sequence: fasta or formatted (289aa) NCBI GI: 4502617
Description:

cyclin D2

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         21           2
 C cysteine            4.2         12           1
 D aspartate           6.9         20           2
 E glutamate           8.3         24           3
 F phenylalanine       2.8          8           1
 G glycine             2.4          7           1
 H histidine           1.7          5           1
 I isoleucine          4.5         13           1
 K lysine              5.9         17           1
 L leucine            14.2         41           2
 M methionine          2.8          8           1
 N asparagine          2.4          7           1
 P proline             4.5         13           2
 Q glutamine           6.6         19           2
 R arginine            5.5         16           2
 S serine              4.8         14           2
 T threonine           5.5         16           1
 V valine              6.2         18           2
 W tryptophan          1.0          3           1
 Y tyrosine            2.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin D2 
CCND1                 0.598   cyclin D1 
CCND3                 0.585   cyclin D3 isoform 2 
CCND3                 0.400   cyclin D3 isoform 1 
CCND3                 0.253   cyclin D3 isoform 3 
CCNA2                 0.122   cyclin A 
CCND3                 0.115   cyclin D3 isoform 4 
CCNE2                 0.115   cyclin E2 
CCNA1                 0.113   cyclin A1 isoform c 
CCNA1                 0.113   cyclin A1 isoform c 
CCNA1                 0.113   cyclin A1 isoform b 
CCNA1                 0.113   cyclin A1 isoform a 
CCNE1                 0.099   cyclin E1 isoform 1 
CCNE1                 0.099   cyclin E1 isoform 2 
CCNB1                 0.081   cyclin B1 
CCNB2                 0.077   cyclin B2 
CCNO                  0.066   cyclin domain containing 
CCNF                  0.066   cyclin F 
CCNI                  0.063   cyclin I 
CNTD2                 0.056   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCNG1                 0.052   cyclin G1 
CCNG1                 0.052   cyclin G1 
CCNB3                 0.052   cyclin B3 isoform 3 
CCNJ                  0.052   cyclin J isoform 1 
CCNI2                 0.045   cyclin I family, member 2 
CCNG2                 0.039   cyclin G2 
CCNH                  0.034   cyclin H 
CCNJL                 0.034   cyclin J-like 
CCNB3                 0.034   cyclin B3 isoform 1 
CCNJ                  0.029   cyclin J isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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