Guide to the Human Genome
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Name: CCND3 Sequence: fasta or formatted (292aa) NCBI GI: 4502619
Description:

cyclin D3 isoform 2

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [211aa] cyclin D3 isoform 1
alt prot [220aa] cyclin D3 isoform 3
alt prot [96aa] cyclin D3 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         30           2
 C cysteine            4.1         12           2
 D aspartate           4.1         12           1
 E glutamate           7.2         21           3
 F phenylalanine       2.1          6           1
 G glycine             4.8         14           1
 H histidine           2.4          7           1
 I isoleucine          3.4         10           1
 K lysine              3.4         10           2
 L leucine            14.0         41           2
 M methionine          3.1          9           1
 N asparagine          0.3          1           1
 P proline             5.8         17           2
 Q glutamine           5.5         16           1
 R arginine            7.5         22           1
 S serine              6.8         20           3
 T threonine           6.2         18           2
 V valine              5.1         15           1
 W tryptophan          1.0          3           1
 Y tyrosine            2.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin D3 isoform 2 
CCND3                 0.701   cyclin D3 isoform 1 
CCND2                 0.580   cyclin D2 
CCND3                 0.575   cyclin D3 isoform 3 
CCND1                 0.480   cyclin D1 
CCND3                 0.292   cyclin D3 isoform 4 
CCNA1                 0.135   cyclin A1 isoform c 
CCNA1                 0.135   cyclin A1 isoform c 
CCNA1                 0.135   cyclin A1 isoform b 
CCNA1                 0.135   cyclin A1 isoform a 
CCNA2                 0.125   cyclin A 
CCNE2                 0.109   cyclin E2 
CCNE1                 0.096   cyclin E1 isoform 1 
CCNE1                 0.096   cyclin E1 isoform 2 
CCNB1                 0.096   cyclin B1 
CCNB2                 0.093   cyclin B2 
CCNO                  0.071   cyclin domain containing 
CCNB3                 0.055   cyclin B3 isoform 3 
CCNJ                  0.053   cyclin J isoform 1 
CNTD2                 0.052   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCNG1                 0.048   cyclin G1 
CCNG1                 0.048   cyclin G1 
CCNI                  0.039   cyclin I 
CCNG2                 0.036   cyclin G2 
CCNB3                 0.034   cyclin B3 isoform 1 
CCNI2                 0.032   cyclin I family, member 2 
CCNF                  0.030   cyclin F 
CCNJ                  0.028   cyclin J isoform 2 
CCNJ                  0.027   cyclin J isoform 3 
CCNJL                 0.025   cyclin J-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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