Guide to the Human Genome
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Name: TIAM2 Sequence: fasta or formatted (1701aa) NCBI GI: 58331187
Description:

T-cell lymphoma invasion and metastasis 2 isoform a

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [626aa] T-cell lymphoma invasion and metastasis 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         92           3
 C cysteine            1.7         29           2
 D aspartate           5.8         98           3
 E glutamate           7.4        126           2
 F phenylalanine       3.8         65           2
 G glycine             6.0        102           2
 H histidine           2.6         45           1
 I isoleucine          3.5         60           1
 K lysine              7.2        122           3
 L leucine            10.8        183           3
 M methionine          1.4         24           1
 N asparagine          4.0         68           2
 P proline             4.9         84           3
 Q glutamine           4.7         80           3
 R arginine            5.6         96           2
 S serine             11.6        198           3
 T threonine           5.4         92           2
 V valine              4.8         82           2
 W tryptophan          0.9         16           1
 Y tyrosine            2.3         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-cell lymphoma invasion and metastasis 2 isoform a ... 
TIAM2                 0.362   T-cell lymphoma invasion and metastasis 2 isoform b ...
TIAM1                 0.284   T-cell lymphoma invasion and metastasis 1 
PLEKHG1               0.027   pleckstrin homology domain containing, family G (wit...
PREX2                 0.025   DEP domain containing 2 isoform b 
PREX2                 0.025   DEP domain containing 2 isoform a 
PREX1                 0.024   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
ARHGEF9               0.023   Cdc42 guanine exchange factor 9 
SPATA13               0.022   spermatogenesis associated 13 
ARHGEF4               0.020   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.020   Rho guanine nucleotide exchange factor 4 isoform b [...
PLEKHG2               0.020   common-site lymphoma/leukemia guanine nucleotide ex...
ARHGEF17              0.020   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
ITSN1                 0.019   intersectin 1 isoform ITSN-l 
DNMBP                 0.018   dynamin binding protein 
ARHGEF6               0.018   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
MCF2L                 0.017   MCF.2 cell line derived transforming sequence-like ...
MCF2L                 0.017   MCF.2 cell line derived transforming sequence-like ...
TRIO                  0.017   triple functional domain (PTPRF interacting) 
KALRN                 0.016   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.016   kalirin, RhoGEF kinase isoform 2 
ARHGEF11              0.016   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.016   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
ITSN2                 0.016   intersectin 2 isoform 3 
ITSN2                 0.016   intersectin 2 isoform 1 
VAV3                  0.016   vav 3 guanine nucleotide exchange factor isoform 1 ...
ECT2                  0.016   epithelial cell transforming sequence 2 oncogene pro...
VAV1                  0.016   vav 1 guanine nucleotide exchange factor 
ARHGEF7               0.016   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.016   PAK-interacting exchange factor beta isoform d [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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