Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TMEM184A Sequence: fasta or formatted (413aa) NCBI GI: 148276981
Description:

transmembrane protein 184A

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         33           2
 C cysteine            2.7         11           2
 D aspartate           2.4         10           1
 E glutamate           3.9         16           1
 F phenylalanine       5.6         23           1
 G glycine             7.5         31           2
 H histidine           2.2          9           1
 I isoleucine          6.3         26           2
 K lysine              2.9         12           2
 L leucine            11.6         48           4
 M methionine          2.2          9           1
 N asparagine          2.2          9           1
 P proline             6.5         27           3
 Q glutamine           5.1         21           2
 R arginine            4.4         18           1
 S serine              8.5         35           2
 T threonine           4.8         20           2
 V valine              6.5         27           1
 W tryptophan          1.2          5           1
 Y tyrosine            5.6         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 184A 
TMEM184B              0.609   transmembrane protein 184B 
TMEM184C              0.193   transmembrane protein 184C 
RAI1                  0.010   retinoic acid induced 1 
RBM33                 0.007   RNA binding motif protein 33 
EP400                 0.006   E1A binding protein p400 
CCND3                 0.006   cyclin D3 isoform 4 
CCND3                 0.006   cyclin D3 isoform 1 
CCND3                 0.006   cyclin D3 isoform 3 
CCND3                 0.006   cyclin D3 isoform 2 
MED13                 0.006   mediator complex subunit 13 
PRB2                  0.006   proline-rich protein BstNI subfamily 2 
PKD2L2                0.006   polycystic kidney disease 2-like 2 
KNDC1                 0.006   kinase non-catalytic C-lobe domain (KIND) containin...
CRHR2                 0.006   corticotropin releasing hormone receptor 2 
PRB1                  0.006   proline-rich protein BstNI subfamily 1 isoform 1 pre...
LOC100293005          0.005   PREDICTED: hypothetical protein 
ACER1                 0.005   alkaline ceramidase 1 
PRB4                  0.005   proline-rich protein BstNI subfamily 4 precursor [Ho...
WDR40A                0.005   WD repeat domain 40A 
SFPQ                  0.005   splicing factor proline/glutamine rich (polypyrimidin...
TMBIM4                0.005   transmembrane BAX inhibitor motif containing 4 [Hom...
SRRM1                 0.005   serine/arginine repetitive matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press