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Search of human proteins with 205361107
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205361107 potassium channel, subfamily K, member 17 isoform
2 [Homo sapiens]
(271 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205361107 potassium channel, subfamily K, member 17 isoform 2... 552 e-157
gi|17025230 potassium channel, subfamily K, member 17 isoform 1 ... 466 e-132
gi|205360983 potassium channel, subfamily K, member 16 isoform 3... 192 3e-49
gi|14149764 potassium channel, subfamily K, member 16 isoform 2 ... 192 3e-49
gi|205360973 potassium channel, subfamily K, member 16 isoform 4... 191 4e-49
gi|205360971 potassium channel, subfamily K, member 16 isoform 1... 191 4e-49
gi|15718767 TRAAK [Homo sapiens] 145 3e-35
gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens] 141 5e-34
gi|14589851 potassium channel, subfamily K, member 2 isoform b [... 132 4e-31
gi|126365795 potassium channel, subfamily K, member 2 isoform c ... 132 4e-31
gi|62912487 potassium channel, subfamily K, member 2 isoform a [... 132 4e-31
gi|20143946 potassium channel, subfamily K, member 10 isoform 3 ... 124 9e-29
gi|20143944 potassium channel, subfamily K, member 10 isoform 2 ... 124 9e-29
gi|10863961 potassium channel, subfamily K, member 10 isoform 1 ... 124 9e-29
gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens] 117 8e-27
gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens] 112 4e-25
gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens] 110 2e-24
gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens] 108 6e-24
gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens] 101 8e-22
gi|5031821 potassium channel, subfamily K, member 7 isoform C [H... 92 6e-19
gi|16118231 potassium channel, subfamily K, member 7 isoform A [... 92 6e-19
gi|16118235 potassium channel, subfamily K, member 7 isoform B [... 92 6e-19
gi|16118233 potassium channel, subfamily K, member 7 isoform B [... 92 6e-19
gi|16306555 potassium channel, subfamily K, member 13 [Homo sapi... 79 3e-15
gi|11545761 potassium channel, subfamily K, member 12 [Homo sapi... 76 4e-14
gi|32469495 potassium channel, subfamily K, member 18 [Homo sapi... 49 5e-06
gi|27886667 potassium voltage-gated channel, subfamily H, member... 45 5e-05
gi|22024390 potassium voltage-gated channel, subfamily H, member... 45 7e-05
gi|27886648 potassium voltage-gated channel, subfamily H, member... 45 7e-05
gi|27886646 potassium voltage-gated channel, subfamily H, member... 45 7e-05
>gi|205361107 potassium channel, subfamily K, member 17 isoform 2
[Homo sapiens]
Length = 271
Score = 552 bits (1423), Expect = e-157
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW
Sbjct: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
Query: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG
Sbjct: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
Query: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA
Sbjct: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
Query: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIASCLISDTRKP 240
GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIASCLISDTRKP
Sbjct: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIASCLISDTRKP 240
Query: 241 NRDWQTLERTSKSSGGLLKYRFLAGHGGSHL 271
NRDWQTLERTSKSSGGLLKYRFLAGHGGSHL
Sbjct: 241 NRDWQTLERTSKSSGGLLKYRFLAGHGGSHL 271
>gi|17025230 potassium channel, subfamily K, member 17 isoform 1
[Homo sapiens]
Length = 332
Score = 466 bits (1199), Expect = e-132
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW
Sbjct: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
Query: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG
Sbjct: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
Query: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA
Sbjct: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
Query: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI 229
GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI
Sbjct: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI 229
>gi|205360983 potassium channel, subfamily K, member 16 isoform 3
[Homo sapiens]
Length = 294
Score = 192 bits (487), Expect = 3e-49
Identities = 98/230 (42%), Positives = 145/230 (63%), Gaps = 17/230 (7%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIAS 231
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+ +
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGT 222
>gi|14149764 potassium channel, subfamily K, member 16 isoform 2
[Homo sapiens]
Length = 309
Score = 192 bits (487), Expect = 3e-49
Identities = 98/230 (42%), Positives = 145/230 (63%), Gaps = 17/230 (7%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIAS 231
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+ +
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGT 222
>gi|205360973 potassium channel, subfamily K, member 16 isoform 4
[Homo sapiens]
Length = 262
Score = 191 bits (486), Expect = 4e-49
Identities = 98/228 (42%), Positives = 144/228 (63%), Gaps = 17/228 (7%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI 229
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVV 220
>gi|205360971 potassium channel, subfamily K, member 16 isoform 1
[Homo sapiens]
Length = 322
Score = 191 bits (486), Expect = 4e-49
Identities = 98/228 (42%), Positives = 144/228 (63%), Gaps = 17/228 (7%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI 229
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVV 220
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 145 bits (367), Expect = 3e-35
Identities = 95/235 (40%), Positives = 130/235 (55%), Gaps = 12/235 (5%)
Query: 21 STVLLLLAY-LAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIR 79
+T+L LLA L YL G VF LE Q + R + + L+ C+ L LI+
Sbjct: 4 TTLLALLALVLLYLVSGALVFRALEQPHEQQAQRELGEVREKFLRAHPCVSDQELGLLIK 63
Query: 80 DVVQAYKNGASLLSNTTSMGR---WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFF 136
+V A GA +N+TS W+L +FFFS + ITTIGYGN++ T A RLFCIF+
Sbjct: 64 EVADALGGGADPETNSTSNSSHSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFY 123
Query: 137 ALVGIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLF 192
ALVGIPL ++L +RLG ++ G+ H + P+ R L+ LL G LLF
Sbjct: 124 ALVGIPLFGILLAGVGDRLGSSLRHGIGHIEAIFLKWHVPPELVRVLSAMLFLLIGCLLF 183
Query: 193 LLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIASCLISDTRKPNRDWQTL 247
+L P +F +ME WS E YF +TL+TVGFGDYV +D R+ + +Q L
Sbjct: 184 VLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAG----ADPRQDSPAYQPL 234
>gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens]
Length = 499
Score = 141 bits (356), Expect = 5e-34
Identities = 74/205 (36%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQ 83
LL A + YLA+G +F LE +++ +++ K LL+ F CL + LD ++ V
Sbjct: 7 LLTSAIIFYLAIGAAIFEVLEEPHWKEAKKNYYTQKLHLLKEFPCLGQEGLDKILEVVSD 66
Query: 84 AYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
A G ++ N T W + F+ + ITTIGYGN++P T A RLFC+F+ L G+PL
Sbjct: 67 AAGQGVAITGNQT-FNNWNWPNAMIFAATVITTIGYGNVAPKTPAGRLFCVFYGLFGVPL 125
Query: 144 NLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLLFSHM 203
L ++ LG L KA+ ++ G+L+ L++PP +F
Sbjct: 126 CLTWISALGKFFGGRAKRLGQFLTKRGVSLRKAQITCTVIFIVWGVLVHLVIPPFVFMVT 185
Query: 204 EGWSYTEGFYFAFITLSTVGFGDYV 228
EGW+Y EG Y++FIT+ST+GFGD+V
Sbjct: 186 EGWNYIEGLYYSFITISTIGFGDFV 210
>gi|14589851 potassium channel, subfamily K, member 2 isoform b
[Homo sapiens]
Length = 411
Score = 132 bits (331), Expect = 4e-31
Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 5/209 (2%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
+ L + YL +G VF LE + K + +C++ LD LI+ +V A
Sbjct: 50 IFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAA 109
Query: 85 YKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
G L NT++ + W+L SFFF+ + ITTIG+GN+SP T ++FCI +AL+GIPL
Sbjct: 110 INAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPL 169
Query: 144 NLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLL 199
+L ++LG + +G+ K R ++ +L G +LF+ LP ++
Sbjct: 170 FGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAII 229
Query: 200 FSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
F H+EGWS + YF ITL+T+GFGDYV
Sbjct: 230 FKHIEGWSALDAIYFVVITLTTIGFGDYV 258
>gi|126365795 potassium channel, subfamily K, member 2 isoform c
[Homo sapiens]
Length = 426
Score = 132 bits (331), Expect = 4e-31
Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 5/209 (2%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
+ L + YL +G VF LE + K + +C++ LD LI+ +V A
Sbjct: 65 IFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAA 124
Query: 85 YKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
G L NT++ + W+L SFFF+ + ITTIG+GN+SP T ++FCI +AL+GIPL
Sbjct: 125 INAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPL 184
Query: 144 NLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLL 199
+L ++LG + +G+ K R ++ +L G +LF+ LP ++
Sbjct: 185 FGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAII 244
Query: 200 FSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
F H+EGWS + YF ITL+T+GFGDYV
Sbjct: 245 FKHIEGWSALDAIYFVVITLTTIGFGDYV 273
>gi|62912487 potassium channel, subfamily K, member 2 isoform a
[Homo sapiens]
Length = 422
Score = 132 bits (331), Expect = 4e-31
Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 5/209 (2%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
+ L + YL +G VF LE + K + +C++ LD LI+ +V A
Sbjct: 61 IFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAA 120
Query: 85 YKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
G L NT++ + W+L SFFF+ + ITTIG+GN+SP T ++FCI +AL+GIPL
Sbjct: 121 INAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPL 180
Query: 144 NLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLL 199
+L ++LG + +G+ K R ++ +L G +LF+ LP ++
Sbjct: 181 FGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAII 240
Query: 200 FSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
F H+EGWS + YF ITL+T+GFGDYV
Sbjct: 241 FKHIEGWSALDAIYFVVITLTTIGFGDYV 269
>gi|20143946 potassium channel, subfamily K, member 10 isoform 3
[Homo sapiens]
Length = 543
Score = 124 bits (311), Expect = 9e-29
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 21 STVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRD 80
+ V + + + YL G VF LE + +K E L++ C+ L++LI+
Sbjct: 76 TVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDHVCVSPQELETLIQH 135
Query: 81 VVQAYKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+ A G S + N+++ W+L +FFF+ + ITTIGYGN++P+T ++FCI +A+
Sbjct: 136 ALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIF 195
Query: 140 GIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLL 195
GIPL +L ++LG + + + K R ++ +L+G ++F+ +
Sbjct: 196 GIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTI 255
Query: 196 PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
P ++F ++EGW+ E YF +TL+TVGFGD+V
Sbjct: 256 PAVIFKYIEGWTALESIYFVVVTLTTVGFGDFV 288
>gi|20143944 potassium channel, subfamily K, member 10 isoform 2
[Homo sapiens]
Length = 543
Score = 124 bits (311), Expect = 9e-29
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 21 STVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRD 80
+ V + + + YL G VF LE + +K E L++ C+ L++LI+
Sbjct: 76 TVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDHVCVSPQELETLIQH 135
Query: 81 VVQAYKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+ A G S + N+++ W+L +FFF+ + ITTIGYGN++P+T ++FCI +A+
Sbjct: 136 ALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIF 195
Query: 140 GIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLL 195
GIPL +L ++LG + + + K R ++ +L+G ++F+ +
Sbjct: 196 GIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTI 255
Query: 196 PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
P ++F ++EGW+ E YF +TL+TVGFGD+V
Sbjct: 256 PAVIFKYIEGWTALESIYFVVVTLTTVGFGDFV 288
>gi|10863961 potassium channel, subfamily K, member 10 isoform 1
[Homo sapiens]
Length = 538
Score = 124 bits (311), Expect = 9e-29
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 21 STVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRD 80
+ V + + + YL G VF LE + +K E L++ C+ L++LI+
Sbjct: 71 TVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDHVCVSPQELETLIQH 130
Query: 81 VVQAYKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+ A G S + N+++ W+L +FFF+ + ITTIGYGN++P+T ++FCI +A+
Sbjct: 131 ALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIF 190
Query: 140 GIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLL 195
GIPL +L ++LG + + + K R ++ +L+G ++F+ +
Sbjct: 191 GIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTI 250
Query: 196 PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
P ++F ++EGW+ E YF +TL+TVGFGD+V
Sbjct: 251 PAVIFKYIEGWTALESIYFVVVTLTTVGFGDFV 283
>gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens]
Length = 313
Score = 117 bits (294), Expect = 8e-27
Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 16/215 (7%)
Query: 26 LLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQAY 85
L AY AYL LG + LEG + + +LLQ C+ PALD+ + V+ A
Sbjct: 11 LAAYAAYLVLGALLVARLEGPHEARLRAELETLRAQLLQRSPCVAAPALDAFVERVLAAG 70
Query: 86 KNGASLLSNTTSMGR-----WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVG 140
+ G +L+N + W+ + FF+ + ITT+GYG +P T A + F I FAL+G
Sbjct: 71 RLGRVVLANASGSANASDPAWDFASALFFASTLITTVGYGYTTPLTDAGKAFSIAFALLG 130
Query: 141 IPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARW--LAGSGALLSGLLLFLL 194
+P +++L RL L+ W S G W A W +A G +++ + L
Sbjct: 131 VPTTMLLLTASAQRLSLLLTHVPLSWLSMRWG-WDPRRAACWHLVALLGVVVT---VCFL 186
Query: 195 LPPLLFSHM-EGWSYTEGFYFAFITLSTVGFGDYV 228
+P ++F+H+ E WS+ + FYF FI+LST+G GDYV
Sbjct: 187 VPAVIFAHLEEAWSFLDAFYFCFISLSTIGLGDYV 221
>gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens]
Length = 330
Score = 112 bits (279), Expect = 4e-25
Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 22/211 (10%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
L+L L YL +G VF LE A R + + L + F L R +QA
Sbjct: 11 LVLCTLCYLLVGAAVFDALESEAESGRQRLLVQKRGALRRKFG-FSAEDYRELERLALQA 69
Query: 85 YKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLN 144
+ A +W+ GSF+F+++ ITTIGYG+ +P T + ++FC+F+AL+GIPL
Sbjct: 70 EPHRAGR--------QWKFPGSFYFAITVITTIGYGHAAPGTDSGKVFCMFYALLGIPLT 121
Query: 145 LVVLNRLGHLMQQGVNHWASR----LGGTWQDPDKARWLAGSGALLSGLL---LFLLLPP 197
LV LG + V LG W ++ +++GLL L L
Sbjct: 122 LVTFQSLGERLNAVVRRLLLAAKCCLGLRW------TCVSTENLVVAGLLACAATLALGA 175
Query: 198 LLFSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
+ FSH EGW++ +Y+ FITL+T+GFGD+V
Sbjct: 176 VAFSHFEGWTFFHAYYYCFITLTTIGFGDFV 206
>gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens]
Length = 394
Score = 110 bits (274), Expect = 2e-24
Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 18/212 (8%)
Query: 22 TVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDV 81
T+ L++ YL +G VF LE + + + EL + L + + L R V
Sbjct: 8 TLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYN-LSQGGYEELERVV 66
Query: 82 VQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGI 141
++ + A + +W GSF+F+++ ITTIGYG+ +P+T ++FC+F+AL+GI
Sbjct: 67 LRLKPHKAGV--------QWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGI 118
Query: 142 PLNLVVLNRLGHLMQQGVNHWASR----LGGTWQDPDKARW-LAGSGALLSGLLLFLLLP 196
PL LV+ LG + V + R LG D A L G + +S L +
Sbjct: 119 PLTLVMFQSLGERINTLVRYLLHRAKKGLGMRRADVSMANMVLIGFFSCIS----TLCIG 174
Query: 197 PLLFSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
FSH E W++ + +Y+ FITL+T+GFGDYV
Sbjct: 175 AAAFSHYEHWTFFQAYYYCFITLTTIGFGDYV 206
>gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens]
Length = 336
Score = 108 bits (269), Expect = 6e-24
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
L+L YL YL G VF ++E + ++ K L+ CL L+ + V++A
Sbjct: 26 LVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHECLSEQQLEQFLGRVLEA 85
Query: 85 YKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLN 144
G S+LSN + W+ + FF+ + ++T GYG+ P + + FCI ++++GIP
Sbjct: 86 SNYGVSVLSNASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFT 145
Query: 145 LVVLNRL-----GHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLL---LFLLLP 196
L+ L + H+ ++ V ++ R G + Q +A A+L G + F +P
Sbjct: 146 LLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQ------VVAIVHAVLLGFVTVSCFFFIP 199
Query: 197 PLLFSHME-GWSYTEGFYFAFITLSTVGFGDYV 228
+FS +E W++ E FYF FI+LST+G GDYV
Sbjct: 200 AAVFSVLEDDWNFLESFYFCFISLSTIGLGDYV 232
>gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens]
Length = 374
Score = 101 bits (251), Expect = 8e-22
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 28/229 (12%)
Query: 22 TVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELL--QNFTCLDRPALDSLIR 79
T+ L++ YL +G VF LE + ++ + N + D L+ +I
Sbjct: 8 TLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYRQLELVI- 66
Query: 80 DVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+Q+ + A + +W+ GSF+F+++ ITTIGYG+ +P T A + FC+F+A++
Sbjct: 67 --LQSEPHRAGV--------QWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVL 116
Query: 140 GIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLF------- 192
GIPL LV+ LG M V + R+ K + + + ++
Sbjct: 117 GIPLTLVMFQSLGERMNTFVRYLLKRI-------KKCCGMRNTDVSMENMVTVGFFSCMG 169
Query: 193 -LLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIASCLISDTRKP 240
L + FS E WS+ +Y+ FITL+T+GFGDYV + +KP
Sbjct: 170 TLCIGAAAFSQCEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKP 218
>gi|5031821 potassium channel, subfamily K, member 7 isoform C [Homo
sapiens]
Length = 257
Score = 91.7 bits (226), Expect = 6e-19
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGD 226
+ ++G S YF F +LST+G D
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLED 217
>gi|16118231 potassium channel, subfamily K, member 7 isoform A
[Homo sapiens]
Length = 307
Score = 91.7 bits (226), Expect = 6e-19
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGD 226
+ ++G S YF F +LST+G D
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLED 217
>gi|16118235 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 91.7 bits (226), Expect = 6e-19
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGD 226
+ ++G S YF F +LST+G D
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLED 217
>gi|16118233 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 91.7 bits (226), Expect = 6e-19
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGD 226
+ ++G S YF F +LST+G D
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLED 217
>gi|16306555 potassium channel, subfamily K, member 13 [Homo
sapiens]
Length = 408
Score = 79.3 bits (194), Expect = 3e-15
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 23 VLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTC---LDRPALDSLIR 79
+LL + YL G VF LE + + + ++ E L NF+ L R L +R
Sbjct: 21 LLLAALIVLYLLGGAAVFSALELAHERQAKQRWE----ERLANFSRGHNLSRDELRGFLR 76
Query: 80 DVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+A + G + RW+ G+F+F + ++TIG+G +P T+ ++F IF+ LV
Sbjct: 77 HYEEATRAGIRV---DNVRPRWDFTGAFYFVGTVVSTIGFGMTTPATVGGKIFLIFYGLV 133
Query: 140 GIPLNLVVLNR--------LGHLMQQGVNHWASRLGGTWQDPDK------ARWLAGSGAL 185
G ++ N + ++M+ R G Q+ K LAG
Sbjct: 134 GCSSTILFFNLFLERLITIIAYIMKSCHQRQLRRRGALPQESLKDAGQCEVDSLAGWKPS 193
Query: 186 LSGLLLFLLLPPLL--------FSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
+ ++L L +L ++ +EGWSY + YF F+ ST+GFGD V
Sbjct: 194 VYYVMLILCTASILISCCASAMYTPIEGWSYFDSLYFCFVAFSTIGFGDLV 244
>gi|11545761 potassium channel, subfamily K, member 12 [Homo
sapiens]
Length = 430
Score = 75.9 bits (185), Expect = 4e-14
Identities = 64/232 (27%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
Query: 23 VLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW-ELLQNFTC---LDRPALDSLI 78
VLL YL G VF LE ++ R +W L+NF+ + P L + +
Sbjct: 40 VLLAALIGLYLVAGATVFSALESPGEAEA-----RARWGATLRNFSAAHGVAEPELRAFL 94
Query: 79 RDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFAL 138
R A G RW+ G+F+F + ++TIG+G +P T+ + F I + L
Sbjct: 95 RHYEAALAAGVRA---DALRPRWDFPGAFYFVGTVVSTIGFGMTTPATVGGKAFLIAYGL 151
Query: 139 VGIPLNLVVLN-----------------RLGHLMQQGVNHWASRLGGTWQDPDK-ARWLA 180
G ++ N R L + G+ R G + D A W
Sbjct: 152 FGCAGTILFFNLFLERIISLLAFIMRACRERQLRRSGLLPATFRRGSALSEADSLAGWKP 211
Query: 181 GSGALLSGLLLFLLL----PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYV 228
+L L LF +L +++ +EGW Y + YF F+T ST+GFGD V
Sbjct: 212 SVYHVLLILGLFAVLLSCCASAMYTSVEGWDYVDSLYFCFVTFSTIGFGDLV 263
Score = 35.8 bits (81), Expect = 0.041
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 96 TSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA-------RLFCIFFALVGIPLNLVVL 148
TS+ W+ V S +F T +TIG+G+L + AA RL F L+G+ +
Sbjct: 236 TSVEGWDYVDSLYFCFVTFSTIGFGDLVSSQHAAYRNQGLYRLGNFLFILLGVCCIYSLF 295
Query: 149 NRLGHLMQQGVNHWASR 165
N + L++Q +N W R
Sbjct: 296 NVISILIKQVLN-WMLR 311
>gi|32469495 potassium channel, subfamily K, member 18 [Homo
sapiens]
Length = 384
Score = 48.9 bits (115), Expect = 5e-06
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 101 WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLM 155
W + S FF + +T+GYG + P T + C+ +AL GIPL +VL G ++
Sbjct: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDIL 155
Score = 33.9 bits (76), Expect = 0.15
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 208 YTEGFYFAFITLSTVGFGDYVI 229
+ FYF F+TL+T+GFGD V+
Sbjct: 310 FENAFYFCFVTLTTIGFGDTVL 331
>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
[Homo sapiens]
Length = 1107
Score = 45.4 bits (106), Expect = 5e-05
Identities = 17/60 (28%), Positives = 40/60 (66%)
Query: 104 VGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWA 163
+ + +F++S++T++G+GN+S NT A ++F I L+G ++ +V + ++Q+ + W+
Sbjct: 422 IAALYFTLSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWS 481
>gi|22024390 potassium voltage-gated channel, subfamily H, member 5
isoform 1 [Homo sapiens]
Length = 988
Score = 45.1 bits (105), Expect = 7e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 96 TSMGRWE--------LVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVV 147
TS G WE V S +F+++++TTIG+GN++P T ++F + +VG L +
Sbjct: 404 TSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATI 463
Query: 148 LNRLGHLMQQ 157
+ + QQ
Sbjct: 464 FGNVTTIFQQ 473
>gi|27886648 potassium voltage-gated channel, subfamily H, member 5
isoform 2 [Homo sapiens]
Length = 624
Score = 45.1 bits (105), Expect = 7e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 96 TSMGRWE--------LVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVV 147
TS G WE V S +F+++++TTIG+GN++P T ++F + +VG L +
Sbjct: 346 TSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATI 405
Query: 148 LNRLGHLMQQ 157
+ + QQ
Sbjct: 406 FGNVTTIFQQ 415
>gi|27886646 potassium voltage-gated channel, subfamily H, member 5
isoform 3 [Homo sapiens]
Length = 611
Score = 45.1 bits (105), Expect = 7e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 96 TSMGRWE--------LVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVV 147
TS G WE V S +F+++++TTIG+GN++P T ++F + +VG L +
Sbjct: 404 TSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATI 463
Query: 148 LNRLGHLMQQ 157
+ + QQ
Sbjct: 464 FGNVTTIFQQ 473
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,178,441
Number of Sequences: 37866
Number of extensions: 422043
Number of successful extensions: 1582
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1326
Number of HSP's gapped (non-prelim): 191
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.