NEIL1 12122

Name: NEIL1	Sequence: fasta or formatted (390aa)		NCBI GI: 205360991
Description: nei endonuclease VIII-like 1		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 31 2 C cysteine 2.1 8 1 D aspartate 3.6 14 1 E glutamate 7.2 28 2 F phenylalanine 4.4 17 2 G glycine 7.9 31 2 H histidine 1.8 7 1 I isoleucine 2.6 10 1 K lysine 6.2 24 3 L leucine 10.3 40 2 M methionine 1.0 4 1 N asparagine 1.8 7 1 P proline 9.7 38 2 Q glutamine 5.6 22 2 R arginine 10.5 41 2 S serine 7.4 29 2 T threonine 2.8 11 1 V valine 4.4 17 2 W tryptophan 1.0 4 1 Y tyrosine 1.8 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nei endonuclease VIII-like 1 NEIL2 0.026 nei like 2 isoform b NEIL2 0.026 nei like 2 isoform a NEIL2 0.026 nei like 2 isoform a NEIL2 0.025 nei like 2 isoform c C2orf55 0.021 hypothetical protein LOC343990 COL7A1 0.014 alpha 1 type VII collagen precursor COL5A3 0.014 collagen, type V, alpha 3 preproprotein SRRM2 0.014 splicing coactivator subunit SRm300 MLL4 0.014 myeloid/lymphoid or mixed-lineage leukemia 4 SMARCD3 0.014 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.014 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.014 SWI/SNF related, matrix associated, actin dependent ... LOC729417 0.013 PREDICTED: hypothetical protein LOC729417 0.013 PREDICTED: hypothetical protein LOC729417 0.013 PREDICTED: hypothetical protein MLL2 0.013 myeloid/lymphoid or mixed-lineage leukemia 2 GPATCH8 0.013 G patch domain containing 8 BUD13 0.013 BUD13 homolog isoform 1 PNMAL2 0.013 PNMA-like 2 PRG4 0.012 proteoglycan 4 isoform D PRG4 0.012 proteoglycan 4 isoform C PRG4 0.012 proteoglycan 4 isoform B PRG4 0.012 proteoglycan 4 isoform A PCF11 0.012 pre-mRNA cleavage complex II protein Pcf11 LTBP2 0.010 latent transforming growth factor beta binding protei... CACNA1B 0.010 calcium channel, voltage-dependent, N type, alpha 1B ... BCAN 0.010 brevican isoform 1 NOM1 0.010 nucleolar protein with MIF4G domain 1 LOC100292909 0.010 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.