CACNA1B 28367

Name: CACNA1B	Sequence: fasta or formatted (2339aa)		NCBI GI: 4502523
Description: calcium channel, voltage-dependent, N type, alpha 1B subunit		Referenced in: Calcium and TRP Cation Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 185 2 C cysteine 1.7 39 1 D aspartate 4.1 95 3 E glutamate 6.7 157 3 F phenylalanine 5.7 133 3 G glycine 7.0 163 3 H histidine 2.5 59 5 I isoleucine 4.7 110 3 K lysine 4.3 101 2 L leucine 9.5 223 3 M methionine 2.9 67 2 N asparagine 3.4 80 2 P proline 6.3 147 3 Q glutamine 3.8 89 3 R arginine 7.5 176 3 S serine 7.1 165 5 T threonine 5.0 118 3 V valine 6.2 145 3 W tryptophan 1.0 24 1 Y tyrosine 2.7 63 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium channel, voltage-dependent, N type, alpha 1B ... CACNA1A 0.583 calcium channel, alpha 1A subunit isoform 4 CACNA1A 0.569 calcium channel, alpha 1A subunit isoform 3 CACNA1E 0.482 calcium channel, voltage-dependent, R type, alpha 1E... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.159 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.158 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.158 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.158 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.158 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.158 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.158 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.158 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.157 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.157 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.157 calcium channel, voltage-dependent, L type, alpha 1D ... CACNA1F 0.157 calcium channel, voltage-dependent, L type, alpha 1F... CACNA1C 0.157 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.156 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.156 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.155 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.155 calcium channel, voltage-dependent, L type, alpha 1... CACNA1S 0.151 calcium channel, voltage-dependent, L type, alpha 1... SCN9A 0.061 sodium channel, voltage-gated, type IX, alpha Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.