Guide to the Human Genome
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Name: NT5C1B Sequence: fasta or formatted (550aa) NCBI GI: 50593108
Description:

5' nucleotidase, cytosolic IB isoform 2

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [610aa] 5' nucleotidase, cytosolic IB isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         39           2
 C cysteine            1.1          6           1
 D aspartate           5.6         31           2
 E glutamate           6.5         36           1
 F phenylalanine       3.6         20           2
 G glycine             5.3         29           2
 H histidine           1.5          8           1
 I isoleucine          4.2         23           1
 K lysine              6.2         34           2
 L leucine             9.1         50           2
 M methionine          1.8         10           1
 N asparagine          3.3         18           2
 P proline             7.3         40           3
 Q glutamine           5.6         31           5
 R arginine            7.5         41           2
 S serine             11.6         64           3
 T threonine           4.9         27           1
 V valine              3.1         17           1
 W tryptophan          1.1          6           1
 Y tyrosine            3.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5' nucleotidase, cytosolic IB isoform 2 
NT5C1B                0.931   5' nucleotidase, cytosolic IB isoform 1 
NT5C1A                0.393   5'-nucleotidase, cytosolic IA 
ZC3H18                0.025   zinc finger CCCH-type containing 18 
SRRM2                 0.024   splicing coactivator subunit SRm300 
SRRM1                 0.021   serine/arginine repetitive matrix 1 
MLLT1                 0.020   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MUC7                  0.020   mucin 7, secreted precursor 
MUC7                  0.020   mucin 7, secreted precursor 
MUC7                  0.020   mucin 7, secreted precursor 
FAM160A2              0.020   hypothetical protein LOC84067 isoform 1 
MRVI1                 0.019   JAW1-related protein isoform a 
MRVI1                 0.019   JAW1-related protein isoform b 
MRVI1                 0.019   JAW1-related protein isoform b 
PCLO                  0.019   piccolo isoform 2 
PCLO                  0.019   piccolo isoform 1 
FNBP4                 0.019   formin binding protein 4 
ENAH                  0.019   enabled homolog isoform a 
ENAH                  0.019   enabled homolog isoform b 
BSN                   0.019   bassoon protein 
MYST3                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
CDC2L5                0.019   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.019   cell division cycle 2-like 5 isoform 2 
SETD1A                0.018   SET domain containing 1A 
C9orf86               0.018   Rab-like GTP-binding protein 1 isoform 2 
LOC100134147          0.018   PREDICTED: hypothetical protein 
PPP1R13L              0.018   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.018   protein phosphatase 1, regulatory subunit 13 like [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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