Guide to the Human Genome
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Name: EIF4G1 Sequence: fasta or formatted (1599aa) NCBI GI: 38201623
Description:

eukaryotic translation initiation factor 4 gamma, 1 isoform 1

Referenced in:

Small RNAs in RNA Processing
Translation Factors

Other entries for this name:
alt prot [1403aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 4
alt mRNA [1599aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 1
alt prot [1435aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 3
alt prot [1512aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        139           4
 C cysteine            0.8         13           1
 D aspartate           4.4         70           3
 E glutamate          10.4        167           8
 F phenylalanine       2.6         41           2
 G glycine             6.8        108           3
 H histidine           1.2         19           1
 I isoleucine          4.0         64           2
 K lysine              6.0         96           2
 L leucine             8.7        139           3
 M methionine          2.0         32           2
 N asparagine          2.6         42           2
 P proline            10.1        162           3
 Q glutamine           5.3         84           2
 R arginine            6.1         98           3
 S serine              7.7        123           3
 T threonine           5.1         81           2
 V valine              5.1         81           2
 W tryptophan          0.8         12           1
 Y tyrosine            1.8         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4 gamma, 1 ... 
EIF4G1                1.000   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.943   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.892   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.872   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G3                0.394   eukaryotic translation initiation factor 4 gamma, 3 ...
EIF4G2                0.054   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.054   eukaryotic translation initiation factor 4 gamma, 2 i...
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
NACA                  0.022   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
PCLO                  0.019   piccolo isoform 2 
PCLO                  0.019   piccolo isoform 1 
PRG4                  0.019   proteoglycan 4 isoform D 
PRG4                  0.019   proteoglycan 4 isoform C 
PRG4                  0.019   proteoglycan 4 isoform B 
PRG4                  0.019   proteoglycan 4 isoform A 
MLL2                  0.018   myeloid/lymphoid or mixed-lineage leukemia 2 
PELP1                 0.018   proline, glutamic acid and leucine rich protein 1 [...
CIC                   0.018   capicua homolog 
FLJ22184              0.018   PREDICTED: hypothetical protein LOC80164 
PAIP1                 0.018   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.018   poly(A) binding protein interacting protein 1 isofor...
KIAA1522              0.017   hypothetical protein LOC57648 
PTPN23                0.017   protein tyrosine phosphatase, non-receptor type 23 [...
LOC645139             0.017   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.017   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.017   PREDICTED: similar to poly(A) binding protein intera...
PAIP1                 0.016   poly(A) binding protein interacting protein 1 isofor...
GLTSCR1               0.016   glioma tumor suppressor candidate region gene 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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