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Search of human proteins with 113425957
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113425957 PREDICTED: hypothetical protein [Homo sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113425957 PREDICTED: hypothetical protein [Homo sapiens] 412 e-115
gi|169210192 PREDICTED: hypothetical protein [Homo sapiens] 401 e-112
gi|169210554 PREDICTED: FLJ44904 protein [Homo sapiens] 235 2e-62
gi|33286436 gametogenetin [Homo sapiens] 45 3e-05
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 45 4e-05
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 42 3e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 41 6e-04
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 41 6e-04
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 41 7e-04
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 41 7e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 41 7e-04
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 40 0.001
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 40 0.002
gi|153792074 proline rich 12 [Homo sapiens] 40 0.002
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 39 0.002
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.003
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.003
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.003
gi|118402590 myosin XV [Homo sapiens] 39 0.004
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 39 0.004
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 38 0.005
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 38 0.005
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 38 0.005
gi|221139926 NHS-like 1 [Homo sapiens] 38 0.006
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 38 0.006
gi|171543895 ataxin 2 [Homo sapiens] 38 0.006
gi|19924097 synapsin I isoform Ib [Homo sapiens] 38 0.006
gi|150417989 cyclin K isoform 1 [Homo sapiens] 38 0.006
gi|126090909 engrailed homeobox 1 [Homo sapiens] 37 0.008
>gi|113425957 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 412 bits (1058), Expect = e-115
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MLLRLCKVRTWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQSPGS 60
MLLRLCKVRTWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQSPGS
Sbjct: 1 MLLRLCKVRTWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQSPGS 60
Query: 61 PRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRR 120
PRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRR
Sbjct: 61 PRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRR 120
Query: 121 RAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSLVLLGWSQGPDP 180
RAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSLVLLGWSQGPDP
Sbjct: 121 RAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSLVLLGWSQGPDP 180
Query: 181 IVNLTEKEMGSERR 194
IVNLTEKEMGSERR
Sbjct: 181 IVNLTEKEMGSERR 194
>gi|169210192 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 401 bits (1031), Expect = e-112
Identities = 191/194 (98%), Positives = 191/194 (98%)
Query: 1 MLLRLCKVRTWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQSPGS 60
MLLRLCKVRTW PAPS ARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQSPG
Sbjct: 1 MLLRLCKVRTWRPAPSSARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQSPGC 60
Query: 61 PRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRR 120
PRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRR
Sbjct: 61 PRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRR 120
Query: 121 RAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSLVLLGWSQGPDP 180
RAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSLVLLGWSQGPDP
Sbjct: 121 RAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSLVLLGWSQGPDP 180
Query: 181 IVNLTEKEMGSERR 194
IVNLTEKEMGSERR
Sbjct: 181 IVNLTEKEMGSERR 194
>gi|169210554 PREDICTED: FLJ44904 protein [Homo sapiens]
Length = 196
Score = 235 bits (599), Expect = 2e-62
Identities = 136/206 (66%), Positives = 142/206 (68%), Gaps = 22/206 (10%)
Query: 1 MLLRLCKVRTWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQS--- 57
MLLRLCKVRT PAPSCARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQS
Sbjct: 1 MLLRLCKVRTRRPAPSCARSQGVQDEIKADPGLARLLLTGSWGPFQEEPQDTENAQSLSW 60
Query: 58 ---PGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCG 114
PG + G P TV + P+ P T+PA P A P G
Sbjct: 61 LSPPGKRARGWRESRGHGPHPTVSAGRPQHSSPS---PRHTTRPAAPRQALP-------G 110
Query: 115 SRLGRRRAGE-----GPRPGRALPFLSLPCQAVPAPTLTP-TPPDPPRAGRKCNERRAVS 168
RR+ GE G + A PFLSLPCQAVPAPTLTP TPPDPPRAGRKCNE RAVS
Sbjct: 111 VHPLRRQVGEETCWGGAQAWAARPFLSLPCQAVPAPTLTPTTPPDPPRAGRKCNECRAVS 170
Query: 169 LVLLGWSQGPDPIVNLTEKEMGSERR 194
LVLLGWSQGPDPIVNLTEKE GSERR
Sbjct: 171 LVLLGWSQGPDPIVNLTEKETGSERR 196
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 45.4 bits (106), Expect = 3e-05
Identities = 42/136 (30%), Positives = 50/136 (36%), Gaps = 26/136 (19%)
Query: 38 LTGSWGPFQEEPQDTENAQSPGSPRQA---------RGPGGG-----GNPGDTVLTPLSA 83
L+G WG P+ +A P P A P G G PG L PL
Sbjct: 383 LSGPWGSPPPPPEQIHSAPGPRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLPP 442
Query: 84 PADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVP 143
P P T P P QP P+A P LG + + P ALP +L P
Sbjct: 443 PTPPPTLQP-PALQPTPLPVAPPLTPG------LGHKESALAPTAAPALP-PALAADQAP 494
Query: 144 APTLTPTP----PDPP 155
AP+ P P P PP
Sbjct: 495 APSPAPAPTVAEPSPP 510
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 45.1 bits (105), Expect = 4e-05
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Query: 50 QDTENAQSPGSPRQARGPGGGGNPG--DTVLTPLSAPA---DPNTHPPAPGTQPALPPLA 104
+ ++ + SP +P +A+G GGGG P D L P P DP PP P P
Sbjct: 524 RSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFMEPPPDFV 583
Query: 105 RPCRVS--TLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPR 156
P S + GS L P P A +P A P P + PP PP+
Sbjct: 584 PPPPPSYAGIAGSEL-----PPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPPK 632
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 42.4 bits (98), Expect = 3e-04
Identities = 47/158 (29%), Positives = 52/158 (32%), Gaps = 23/158 (14%)
Query: 41 SWGPFQEEPQD--TENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPN----THPPAP 94
+W P PQ T +A PG+ +A G G T P P P P
Sbjct: 71 TWPPLCCYPQSRPTASAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPGGPALRPTPRP 130
Query: 95 GTQPALPPLARPCRVSTLC----GSRLGRRRAGEGPR------PGRALPFLSL------P 138
PA PP +R CR R GRR P R P S
Sbjct: 131 CAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAAWSARGAPLCSYRTSCAGS 190
Query: 139 CQAVPAPTLTPTPPDPPRAGRK-CNERRAVSLVLLGWS 175
C A APT PT P A C RRA S WS
Sbjct: 191 CGARTAPTPAPTCASPSAAASSCCRRRRACSSPTTAWS 228
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 41.2 bits (95), Expect = 6e-04
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 15/122 (12%)
Query: 43 GPFQEEPQDTENAQSPGSPRQARGPGGGGN---PGDTVL----TPLSAPADPNTHPPAPG 95
GP + +E++ + SP R P GG P L TPLS+PA + P A G
Sbjct: 195 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA--RSGPSARG 252
Query: 96 TQ--PALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPD 153
T PA P +P + L ++ R P G P S P A P+P+ P+P
Sbjct: 253 TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG---PLSSSPL-ATPSPSAPPSPSA 308
Query: 154 PP 155
PP
Sbjct: 309 PP 310
Score = 35.8 bits (81), Expect = 0.023
Identities = 40/144 (27%), Positives = 49/144 (34%), Gaps = 26/144 (18%)
Query: 43 GPFQEEPQDTENAQSPGSPRQARG----PGGGGNPGDTVLTPLSAPADPNTHPPAPGTQP 98
GP P T + +P SP P P T L +P TH P P
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS--P 345
Query: 99 ALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAG 158
L PLA P + P P ALP L P +P L+P P+A
Sbjct: 346 PLSPLATP---------------PPQAP-PALALPPLQAPPSPPASPPLSPLATPSPQAP 389
Query: 159 RKCNERRAVSLVLLGWSQGPDPIV 182
AV L+ +S P P V
Sbjct: 390 NAL----AVHLLQAPFSPPPSPPV 409
Score = 29.3 bits (64), Expect = 2.2
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 22/118 (18%)
Query: 52 TENAQSPGSPRQARGPGGGG-NPGDTVLTPLSAPADPN-THPPAPGTQPAL-----PPLA 104
T ++ P S R R P +PG P+S+P + T P P Q L +A
Sbjct: 80 TRTSRPPASGRGERAPPAKNTSPG-----PVSSPGRASGTTRPGPLGQKGLRISAEETVA 134
Query: 105 RPCRVSTLCGSRL--GRRRAGEGPRPGRALPFLSLPCQAV--------PAPTLTPTPP 152
R S L G RR GP PG P ++ +A PAP+ P PP
Sbjct: 135 RGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPP 192
Score = 29.3 bits (64), Expect = 2.2
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Query: 73 PGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRAL 132
P V P S PA P P A A P LA P P P
Sbjct: 405 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 464
Query: 133 PFLSLPCQ-AVPAPTLTPTPPDPP 155
P + P Q A P P P PP
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPP 488
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 41.2 bits (95), Expect = 6e-04
Identities = 41/132 (31%), Positives = 55/132 (41%), Gaps = 14/132 (10%)
Query: 58 PGSPRQARGPGGGGNPGDTVLTPL-SAPADPNTHPPAPG---TQPALPPLARPCRVSTLC 113
PGSP + P +P +P PAD PP+ + PA P A R S+L
Sbjct: 1107 PGSPTHSLSP----SPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLH 1162
Query: 114 G--SRLGRRRAGEGPRPGRA-LPFLSLPCQAVPAP---TLTPTPPDPPRAGRKCNERRAV 167
G ++LG R G R + +P L C + AP + +P P PP R RR
Sbjct: 1163 GLAAKLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSPLPGHPPAPARSPRLRRGQ 1222
Query: 168 SLVLLGWSQGPD 179
S LG + D
Sbjct: 1223 SADKLGTGERLD 1234
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 40.8 bits (94), Expect = 7e-04
Identities = 41/140 (29%), Positives = 54/140 (38%), Gaps = 19/140 (13%)
Query: 38 LTGSWGPFQEEPQDTENAQS----------PGSPRQARGPGGGGNPGD--TVLTPLSAPA 85
LTG +E +D + + P P +A P PGD T++ P AP
Sbjct: 535 LTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPG 594
Query: 86 DPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRAL--PFLSLP-CQAV 142
D T PP P P PPL +S+ G + P G A P LP +
Sbjct: 595 DSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGI 654
Query: 143 PAPTLTP----TPPDPPRAG 158
P+P+ P PP PP G
Sbjct: 655 PSPSSLPGGTAIPPPPPLPG 674
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 40.8 bits (94), Expect = 7e-04
Identities = 41/140 (29%), Positives = 54/140 (38%), Gaps = 19/140 (13%)
Query: 38 LTGSWGPFQEEPQDTENAQS----------PGSPRQARGPGGGGNPGD--TVLTPLSAPA 85
LTG +E +D + + P P +A P PGD T++ P AP
Sbjct: 544 LTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPG 603
Query: 86 DPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRAL--PFLSLP-CQAV 142
D T PP P P PPL +S+ G + P G A P LP +
Sbjct: 604 DSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGI 663
Query: 143 PAPTLTP----TPPDPPRAG 158
P+P+ P PP PP G
Sbjct: 664 PSPSSLPGGTAIPPPPPLPG 683
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 40.8 bits (94), Expect = 7e-04
Identities = 37/119 (31%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 40 GSWGPFQEEPQDTENAQ--SPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTH-PPAPGT 96
GS P P T + P SPR GN + +AP PN PP P
Sbjct: 127 GSRAPSPRLPNKTISGPLIPPASPRL-------GNTSEAHGAARTAPPRPNVPAPPPPTP 179
Query: 97 QPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPP 155
P PPL P S+ + L + GP LP ++ P P P P PP PP
Sbjct: 180 PPPPPPLPPPLPSSSPIKTPLV---SPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPP 235
Score = 27.3 bits (59), Expect = 8.4
Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 12/98 (12%)
Query: 80 PLSAPADPNTHPPAPGTQPALPPLARPCRV--STLCGSRLGRRRAGEGPRPGRALPFLSL 137
P+ AP P PP P P PP P V +L P P LP
Sbjct: 213 PVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGY 272
Query: 138 P-CQAVPAPTL-------TPTPPDPPRAGRKCNERRAV 167
P +A PA P PP PP A C+ R ++
Sbjct: 273 PGLKAEPASPAQDAQEPPAPPPPLPPYA--SCSPRASL 308
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 40.0 bits (92), Expect = 0.001
Identities = 36/117 (30%), Positives = 41/117 (35%), Gaps = 11/117 (9%)
Query: 40 GSWGPFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPA 99
G GP P + P P GP G PG + PL+ P + PP P P
Sbjct: 222 GPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG 281
Query: 100 LPPLARPCRVSTLCGSRLGRRRAGEGPR-PGRALPFLSLPCQAVPAPTLTPTPPDPP 155
P +P LG G P PG P P Q P P P PP PP
Sbjct: 282 -QPFGQP---------PLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP 328
Score = 36.2 bits (82), Expect = 0.018
Identities = 35/105 (33%), Positives = 36/105 (34%), Gaps = 26/105 (24%)
Query: 58 PGSPRQARGPGGGGNP------GDT-VLTPLSAPADPNTHPPAPGTQPALPPLARPCRVS 110
PG R GP G G P G T PL P P P P Q PPLA P
Sbjct: 212 PGGDRFP-GPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGP---- 266
Query: 111 TLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPP 155
G RP P + P Q P L P PP PP
Sbjct: 267 -----------PNRGDRPP---PPVLFPGQPFGQPPLGPLPPGPP 297
Score = 30.4 bits (67), Expect = 0.99
Identities = 19/61 (31%), Positives = 21/61 (34%)
Query: 42 WGPFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALP 101
+GP P + P P R PG G P P P PPAP PA
Sbjct: 303 YGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFF 362
Query: 102 P 102
P
Sbjct: 363 P 363
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 39.7 bits (91), Expect = 0.002
Identities = 41/108 (37%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 53 ENAQSPGSPRQARGPGGG--GNPGDTVLTPLSAPADPNTHPPAPGTQPAL---PP--LAR 105
E SPG R+ RG G P L P P P PP P P L PP L +
Sbjct: 220 EEGLSPGGKRR-RGCNSEQTGLPPGLPLPPPPLPPPPPPPPPPPPPLPGLATSPPFQLTK 278
Query: 106 PCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLP-CQAVPAPTLTPTPP 152
P STL G G R G P P R SLP PAP T PP
Sbjct: 279 PGLWSTLHGDAWGPERKGSAP-PERQEQRHSLPHPYPYPAPAYTAHPP 325
Score = 39.7 bits (91), Expect = 0.002
Identities = 50/188 (26%), Positives = 66/188 (35%), Gaps = 33/188 (17%)
Query: 2 LLRLCKVRTWCPAPSC--ARSQG-VQDEI---------KADPGLARLLLTGSWGP----F 45
LLR W P+C AR G + +E+ A P L G GP F
Sbjct: 476 LLRPPPPPAWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHR--EGFLGPPASRF 533
Query: 46 QEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPA--------DPNTHPPAPGTQ 97
QD+ +P +P + G+ + P+S P DP PP+P
Sbjct: 534 SVGTQDSHTPPTPPTPTTSSSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQN 593
Query: 98 PALPPLA------RPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTP 151
P PPL P S+ + G R E PRP + P P L+ P
Sbjct: 594 PQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPPPGPLSKAP 653
Query: 152 -PDPPRAG 158
P PP G
Sbjct: 654 QPVPPGVG 661
Score = 35.0 bits (79), Expect = 0.040
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 94 PGTQPALPPLARPCRVSTLCG-------SRLGRRRAGEGPRPGRALPFLSLPCQAVPAPT 146
P + A PP+ +P + L G S G+RR G P L LP +P P
Sbjct: 196 PVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPPPPLPPPP 255
Query: 147 LTPTPPDPPRAG 158
P PP PP G
Sbjct: 256 PPPPPPPPPLPG 267
Score = 30.0 bits (66), Expect = 1.3
Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 24/86 (27%)
Query: 70 GGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPG 129
G G T L P SA P A G+ P + + ST G RRAGE P PG
Sbjct: 840 GPPSGATALPPTSAA------PSAQGSPQ--PSASSSSQFSTSGGPWARERRAGEEPVPG 891
Query: 130 RALPFLSLPCQAVPAPTLTPTPPDPP 155
+TPT P PP
Sbjct: 892 ----------------PMTPTQPPPP 901
Score = 28.9 bits (63), Expect = 2.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
Query: 141 AVPAPTLTPTPPDPPRAGRKCNER--------RAVSLVLLGWSQGP 178
+ PAP+ PTPP G+K E RA L L S+GP
Sbjct: 1054 SAPAPSAQPTPPSASVPGKKAREEAPGPPGVSRADMLKLRSLSEGP 1099
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/114 (31%), Positives = 38/114 (33%), Gaps = 30/114 (26%)
Query: 49 PQDTENAQSPGSPRQARGPGGGGNPG-------DTVLTPLSAPADPNTHPPAPGTQPALP 101
P+DT P A PG PG T PL P T PPAP QP P
Sbjct: 1413 PKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP 1472
Query: 102 PLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPP 155
P P P ALP S P P P+ P PP PP
Sbjct: 1473 P---------------------PPPPPQPALP--SPPPLVAPTPSSPPPPPLPP 1503
Score = 33.5 bits (75), Expect = 0.12
Identities = 25/68 (36%), Positives = 26/68 (38%), Gaps = 13/68 (19%)
Query: 101 PPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSL-------------PCQAVPAPTL 147
PPLA P ST G L A GP P LP + P PAPT
Sbjct: 1408 PPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTP 1467
Query: 148 TPTPPDPP 155
P PP PP
Sbjct: 1468 QPQPPPPP 1475
Score = 28.9 bits (63), Expect = 2.9
Identities = 29/104 (27%), Positives = 33/104 (31%), Gaps = 21/104 (20%)
Query: 69 GGGNPGDTVLTPLSAPADPNTHPPAPGT-QPALPPLARPCRVSTLCGSRLGRRRAGEG-- 125
GGG G L P P P PG P PP P + + L S A +
Sbjct: 210 GGGVLGPAGLGPAQTP------PYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSP 263
Query: 126 ------------PRPGRALPFLSLPCQAVPAPTLTPTPPDPPRA 157
P P RALP + P PP PP A
Sbjct: 264 QLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPPA 307
Score = 27.7 bits (60), Expect = 6.4
Identities = 35/121 (28%), Positives = 43/121 (35%), Gaps = 27/121 (22%)
Query: 40 GSWGPFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPA 99
G GP ++E A P P A P G PG ++ A P T P G P
Sbjct: 963 GKAGPPEDEGDPKAGAGPPPGP-PAYDPYGPYCPGR------ASGAGPET--PGLGLDPN 1013
Query: 100 LPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGR 159
PP ST+ LG ++G P QA P P P PP P +
Sbjct: 1014 KPPELP----STVNAEPLGLIQSG--------------PHQAAPPPPPPPPPPPAPASEP 1055
Query: 160 K 160
K
Sbjct: 1056 K 1056
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 54 NAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPC--RVST 111
+A +PG+P R P PGD L P +P P P ++PA PP R +
Sbjct: 113 SASAPGAPPLVRVPRPVEPPGD-----LGLPTEPQDTPGGPASEPAQPPGERSADPPLPA 167
Query: 112 LCGSRLGRRRAGEGPRPGRALPFLSLPC----QAVPAPTLTPTPP 152
L ++ R + + P RA + PC A P P PP
Sbjct: 168 LELAQATERPSADAAPPPRAPSEAASPCSDPPDAEPGPGAAKGPP 212
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 38.9 bits (89), Expect = 0.003
Identities = 40/117 (34%), Positives = 44/117 (37%), Gaps = 22/117 (18%)
Query: 45 FQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPN-THPPAPGTQPALPPL 103
FQ P N +P PRQ GG P S P P T PAP P PP
Sbjct: 170 FQRPPVYLGNKPTP--PRQEGSFGG---------RPKSQPPLPQETAAPAPQPGPTAPP- 217
Query: 104 ARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPP-RAGR 159
ARP + G R G GP LP +P P +P PP P R GR
Sbjct: 218 ARPPAYESREGPRGRAESRGSGPAQPAHLP--------LPGPAHSPAPPAPELREGR 266
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 38.9 bits (89), Expect = 0.003
Identities = 40/117 (34%), Positives = 44/117 (37%), Gaps = 22/117 (18%)
Query: 45 FQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPN-THPPAPGTQPALPPL 103
FQ P N +P PRQ GG P S P P T PAP P PP
Sbjct: 170 FQRPPVYLGNKPTP--PRQEGSFGG---------RPKSQPPLPQETAAPAPQPGPTAPP- 217
Query: 104 ARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPP-RAGR 159
ARP + G R G GP LP +P P +P PP P R GR
Sbjct: 218 ARPPAYESREGPRGRAESRGSGPAQPAHLP--------LPGPAHSPAPPAPELREGR 266
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 38.9 bits (89), Expect = 0.003
Identities = 40/117 (34%), Positives = 44/117 (37%), Gaps = 22/117 (18%)
Query: 45 FQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPN-THPPAPGTQPALPPL 103
FQ P N +P PRQ GG P S P P T PAP P PP
Sbjct: 170 FQRPPVYLGNKPTP--PRQEGSFGG---------RPKSQPPLPQETAAPAPQPGPTAPP- 217
Query: 104 ARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPP-RAGR 159
ARP + G R G GP LP +P P +P PP P R GR
Sbjct: 218 ARPPAYESREGPRGRAESRGSGPAQPAHLP--------LPGPAHSPAPPAPELREGR 266
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 38.5 bits (88), Expect = 0.004
Identities = 34/112 (30%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 60 SPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGR 119
SP + P +PG +PL+ P+ + P P LPP RP
Sbjct: 771 SPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPARRP------------- 817
Query: 120 RRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSLVL 171
R E P P RA L P +P +P PP PP C+ R SL L
Sbjct: 818 RSLQESPAPRRAAGRLGPPGSPLPG---SPRPPSPPLG--LCHSPRRSSLNL 864
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 38.5 bits (88), Expect = 0.004
Identities = 36/123 (29%), Positives = 43/123 (34%), Gaps = 19/123 (15%)
Query: 44 PFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSA---PADPNTHPPAPGTQPAL 100
P P P P Q P G +P V+ P ++ P P HPPAPG P
Sbjct: 260 PLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPA 319
Query: 101 PPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAV--PAPTLTPTPP---DPP 155
P + P G G P P + P V PAP + P P PP
Sbjct: 320 PGVHPPTS---------GVHPPAPGVHP--PAPGVHPPAPGVHPPAPGVHPPAPGVHPPP 368
Query: 156 RAG 158
AG
Sbjct: 369 SAG 371
Score = 32.0 bits (71), Expect = 0.34
Identities = 26/86 (30%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 73 PGDTVLTPLSAPADPNTHPPAPGTQPALPPL-ARPCRVSTLCGSRLGRRRAGEGPRPGRA 131
PG P P P HPPAPG P P + +P V + PG
Sbjct: 377 PGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVH 436
Query: 132 LPFLSLPCQAVPAPTLTP--TPPDPP 155
P P P P+ P PP PP
Sbjct: 437 PPTPMPPMLRPPLPSEGPGNIPPPPP 462
Score = 31.6 bits (70), Expect = 0.44
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 8/80 (10%)
Query: 73 PGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRAL 132
PG P P P HPPAPG P P + P G G P
Sbjct: 334 PGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP--------PSAGVHPQAPGVHPAAPA 385
Query: 133 PFLSLPCQAVPAPTLTPTPP 152
P PAP + P P
Sbjct: 386 VHPQAPGVHPPAPGMHPQAP 405
Score = 27.7 bits (60), Expect = 6.4
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 58 PGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALP 101
P +P P G +P P PA P HP APG P P
Sbjct: 359 PPAPGVHPPPSAGVHPQ----APGVHPAAPAVHPQAPGVHPPAP 398
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 38.1 bits (87), Expect = 0.005
Identities = 45/147 (30%), Positives = 52/147 (35%), Gaps = 16/147 (10%)
Query: 10 TWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGP---FQEEPQDTENAQSPGSPRQARG 66
T P+P A +Q PG S GP +E PQ G+P Q R
Sbjct: 30 TLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQDRA 89
Query: 67 PGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGP 126
P PG A T PAP PP RV+ G G R+ E P
Sbjct: 90 PSAHV-PGS---------ASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSRE-P 138
Query: 127 RP--GRALPFLSLPCQAVPAPTLTPTP 151
RP G P + P A P P TP P
Sbjct: 139 RPQDGTPPPVDTPPRTARPRPAFTPRP 165
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 38.1 bits (87), Expect = 0.005
Identities = 45/147 (30%), Positives = 52/147 (35%), Gaps = 16/147 (10%)
Query: 10 TWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGP---FQEEPQDTENAQSPGSPRQARG 66
T P+P A +Q PG S GP +E PQ G+P Q R
Sbjct: 30 TLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQDRA 89
Query: 67 PGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGP 126
P PG A T PAP PP RV+ G G R+ E P
Sbjct: 90 PSAHV-PGS---------ASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSRE-P 138
Query: 127 RP--GRALPFLSLPCQAVPAPTLTPTP 151
RP G P + P A P P TP P
Sbjct: 139 RPQDGTPPPVDTPPRTARPRPAFTPRP 165
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 38.1 bits (87), Expect = 0.005
Identities = 45/147 (30%), Positives = 52/147 (35%), Gaps = 16/147 (10%)
Query: 10 TWCPAPSCARSQGVQDEIKADPGLARLLLTGSWGP---FQEEPQDTENAQSPGSPRQARG 66
T P+P A +Q PG S GP +E PQ G+P Q R
Sbjct: 30 TLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQDRA 89
Query: 67 PGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGP 126
P PG A T PAP PP RV+ G G R+ E P
Sbjct: 90 PSAHV-PGS---------ASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSRE-P 138
Query: 127 RP--GRALPFLSLPCQAVPAPTLTPTP 151
RP G P + P A P P TP P
Sbjct: 139 RPQDGTPPPVDTPPRTARPRPAFTPRP 165
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 38.1 bits (87), Expect = 0.005
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 43 GPFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQP-ALP 101
GP + +++A+SP Q P GG P P P P PP G +P P
Sbjct: 223 GPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQG----PPPPPGKPQGPPPQGGNKPQGPP 278
Query: 102 PLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRK 160
P +P GS+ R+ G +P P Q P P P P PP+ G K
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPG-KPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNK 335
Score = 35.4 bits (80), Expect = 0.031
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 49 PQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPP 102
PQ Q P P + +GP GD +P S P P PP G QP PP
Sbjct: 83 PQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP 133
Score = 34.7 bits (78), Expect = 0.052
Identities = 37/130 (28%), Positives = 47/130 (36%), Gaps = 17/130 (13%)
Query: 43 GPFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQP-ALP 101
GP + + +++SP Q P GG P P P P PP G +P P
Sbjct: 285 GPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQG----PPPPPGKPQGPPPQGGNKPQGPP 340
Query: 102 PLARPCRVSTLCGSRLGRRRA----------GEGPRP-GRALPFLSLPCQAVPAPTLTPT 150
P +P GS+ R+ EG P G P P Q P P
Sbjct: 341 PPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQ 400
Query: 151 -PPDPPRAGR 159
PP PP+ GR
Sbjct: 401 GPPRPPQGGR 410
Score = 34.3 bits (77), Expect = 0.068
Identities = 34/121 (28%), Positives = 41/121 (33%), Gaps = 8/121 (6%)
Query: 43 GPFQEEPQDTENAQSPGSPR---QARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPA 99
G Q P + ++SP SP Q P GG P P P P PP G +P
Sbjct: 96 GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG----PPPPPGKPQGPPPQGGNKPQ 151
Query: 100 LPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGR 159
PP + G R +P P Q P P P P PP+ G
Sbjct: 152 GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGN 210
Query: 160 K 160
K
Sbjct: 211 K 211
Score = 33.1 bits (74), Expect = 0.15
Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 5/118 (4%)
Query: 43 GPFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPP 102
GP + + +++SP Q P GG P P P P PP G +P PP
Sbjct: 161 GPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQG----PPPPPGKPQGPPPQGGNKPQGPP 216
Query: 103 LARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRK 160
+ G + +P P Q P P P P PP+ G K
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNK 273
Score = 32.3 bits (72), Expect = 0.26
Identities = 34/115 (29%), Positives = 40/115 (34%), Gaps = 9/115 (7%)
Query: 49 PQDTENAQSPGSPR---QARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLAR 105
PQ Q P SP Q P GG P P P P PP G +P PP
Sbjct: 41 PQGGNKPQGPPSPPGKPQGPPPQGGNQPQG----PPPPPGKPQGPPPQGGNKPQGPPPPG 96
Query: 106 PCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRK 160
+ G + R+ G +P P Q P P P P PP+ G K
Sbjct: 97 KPQGPPPQGDKSRSPRSPPG-KPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNK 149
Score = 31.2 bits (69), Expect = 0.58
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
Query: 50 QDTENAQSP----GSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPP 102
+D +SP G+P Q P GG P P S P P PP G QP PP
Sbjct: 21 EDVSQEESPSLIAGNP-QGAPPQGGNKPQG----PPSPPGKPQGPPPQGGNQPQGPP 72
Score = 28.5 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 56 QSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPP 102
Q G+ Q P GGNP P P P P G +P+ PP
Sbjct: 371 QQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPR--PPQGGRPSRPP 415
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 37.7 bits (86), Expect = 0.006
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 52 TENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVST 111
+ ++ S S G G V +P + P P PP P P L P V+
Sbjct: 899 SSSSTSLSSSTSTEGSGTMKKLDPAVGSPPAPPPPPVPSPPFPCPADRSPFLPPPPPVTD 958
Query: 112 LC-GSRLGRRRAGEGPRPGRALPFLSLP--CQAVPAPTLTPTPPDPP 155
GS L P P +PF S P C + P P L+P PD P
Sbjct: 959 CSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALSPILPDSP 1005
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 37.7 bits (86), Expect = 0.006
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 3/112 (2%)
Query: 42 WGPFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALP 101
W +E+ + +N P P G P + TP +A A+ + PG PA P
Sbjct: 23 WKAKREKMRAKQNPPGPAPPGGGSSDAAGKPPAGALGTPAAAAAN-ELNNNLPGGAPAAP 81
Query: 102 PLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPD 153
+ P V+ GS + RA GPR P + A P P PD
Sbjct: 82 AVPGPGGVNCAVGSAM-LTRAAPGPRRSEDEP-PAASASAAPPPQRDEEEPD 131
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 37.7 bits (86), Expect = 0.006
Identities = 42/111 (37%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 62 RQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGS---RLG 118
R RG GGG PG P +AP P PP P Q + PP A C S G R G
Sbjct: 37 RSGRG-GGGAAPGPY---PSAAPPPPGPGPP-PSRQSS-PPSASDCFGSNGNGGGAFRPG 90
Query: 119 RRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGRKCNERRAVSL 169
RR P R L LP + AP PT P A R R VSL
Sbjct: 91 SRRLLGLGGPPRPFVVLLLPLASPGAPPAAPTRASPLGA-RASPPRSGVSL 140
Score = 31.2 bits (69), Expect = 0.58
Identities = 31/93 (33%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 64 ARGPGGGG-NPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRA 122
+ G GGG PG L L P P P P PP A P R S L G+R R+
Sbjct: 79 SNGNGGGAFRPGSRRLLGLGGPPRPFVVLLLPLASPGAPP-AAPTRASPL-GARASPPRS 136
Query: 123 GEG---PRPGRALPFLSLPCQAVPAPTLTPTPP 152
G P PG P C+ V P P
Sbjct: 137 GVSLARPAPGCPRP----ACEPVYGPLTMSLKP 165
Score = 27.3 bits (59), Expect = 8.4
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 57 SPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSR 116
SP S +R G + TP P+ P + P P + P+ P VST
Sbjct: 558 SPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAH--GSPAPVST----- 610
Query: 117 LGRRRAGEGP 126
+ +R + EGP
Sbjct: 611 MPKRMSSEGP 620
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 37.7 bits (86), Expect = 0.006
Identities = 45/133 (33%), Positives = 53/133 (39%), Gaps = 23/133 (17%)
Query: 55 AQSPGSPRQARGPGG------GGNPGDTVLTPLSAPADPNTHPPAPGTQ-----PALPP- 102
A PG+P AR P G P T T +S PA P PG Q P PP
Sbjct: 537 AGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPG 596
Query: 103 LARPCRVSTLCG--SRLG------RRRAGEGPRPGRALPFLS-LPCQAVPAPTLTPTPPD 153
A P R ++ G R G R +G GP GR P L+ P Q VP P T
Sbjct: 597 PAGPTRQASQAGPVPRTGPPTTQQPRPSGPGP-AGRPKPQLAQKPSQDVPPPA-TAAAGG 654
Query: 154 PPRAGRKCNERRA 166
PP K + +A
Sbjct: 655 PPHPQLKASPAQA 667
Score = 34.3 bits (77), Expect = 0.068
Identities = 37/127 (29%), Positives = 46/127 (36%), Gaps = 26/127 (20%)
Query: 46 QEEPQDTENAQSPGSPRQARGPGGGGNP--GDTVLTPLSAPADPNTHP------PAPGTQ 97
Q P+ + SPG + P G P T P PA P P PG Q
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQ 475
Query: 98 PALPPL-ARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTPP---- 152
PPL RP + + +G GP G LP Q +P+PT P P
Sbjct: 476 RQGPPLQQRP-------PPQGQQHLSGLGPPAGSPLP------QRLPSPTSAPQQPASQA 522
Query: 153 DPPRAGR 159
PP G+
Sbjct: 523 APPTQGQ 529
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 37.7 bits (86), Expect = 0.006
Identities = 35/124 (28%), Positives = 45/124 (36%), Gaps = 14/124 (11%)
Query: 44 PFQEEPQDTENAQSPGSPRQARGPGGGGNPGDTVLTPLSAPADPN--THPPAPG------ 95
P Q++PQ Q P + P +P + +P + N PP P
Sbjct: 302 PQQKDPQQPAQQQQPAQQPKKPSPQPS-SPRQVKRAVVVSPKEENKAAEPPPPKIPKIET 360
Query: 96 TQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPCQAVPAPTLTPTP---- 151
T P LPP P + LG GP LP + +P A PAP P P
Sbjct: 361 THPPLPPAHPPPDRKPPLAAALGEAEP-PGPVDATDLPKVQIPPPAHPAPVHQPPPLPHR 419
Query: 152 PDPP 155
P PP
Sbjct: 420 PPPP 423
Score = 33.9 bits (76), Expect = 0.089
Identities = 26/79 (32%), Positives = 27/79 (34%), Gaps = 9/79 (11%)
Query: 80 PLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRRAGEGPRPGRALPFLSLPC 139
P P P PP P P PP P R+ P PG LP S P
Sbjct: 497 PAIPPPTPGYPPPPPTYNPNFPP--PPPRLPPT-------HAVPPHPPPGLGLPPASYPP 547
Query: 140 QAVPAPTLTPTPPDPPRAG 158
AVP P PP P G
Sbjct: 548 PAVPPGGQPPVPPPIPPPG 566
Score = 29.3 bits (64), Expect = 2.2
Identities = 23/85 (27%), Positives = 29/85 (34%), Gaps = 7/85 (8%)
Query: 78 LTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGR-------RRAGEGPRPGR 130
+ P + PA + PP P P PP + +ST G EGP G
Sbjct: 401 IPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGA 460
Query: 131 ALPFLSLPCQAVPAPTLTPTPPDPP 155
P P P + P P PP
Sbjct: 461 LPPAYGPPAHLPYHPHVYPPNPPPP 485
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 37.4 bits (85), Expect = 0.008
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 10/48 (20%)
Query: 57 SPGSPRQARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLA 104
SPG A G G G+ GD+V P P PP+P P LPPLA
Sbjct: 32 SPG----ASGSSGSGSDGDSV------PVSPQPAPPSPPAAPCLPPLA 69
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.137 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,799,340
Number of Sequences: 37866
Number of extensions: 826878
Number of successful extensions: 7714
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 889
Number of HSP's that attempted gapping in prelim test: 5398
Number of HSP's gapped (non-prelim): 2733
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.