Guide to the Human Genome
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Name: ANKRD36 Sequence: fasta or formatted (948aa) NCBI GI: 239753231
Description:

PREDICTED: ankyrin repeat domain 36

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [1524aa] PREDICTED: ankyrin repeat domain 36
alt prot [753aa] PREDICTED: ankyrin repeat domain 36
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         68           2
 C cysteine            0.7          7           1
 D aspartate           7.1         67           2
 E glutamate           8.2         78           2
 F phenylalanine       1.5         14           1
 G glycine             5.4         51           3
 H histidine           0.4          4           1
 I isoleucine          5.1         48           2
 K lysine             12.8        121           3
 L leucine             5.3         50           2
 M methionine          0.6          6           1
 N asparagine          3.1         29           1
 P proline             5.2         49           3
 Q glutamine           4.4         42           2
 R arginine            4.2         40           2
 S serine             14.1        134           2
 T threonine           7.6         72           2
 V valine              5.9         56           1
 W tryptophan          0.1          1           1
 Y tyrosine            1.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain 36 
ANKRD36               0.799   PREDICTED: ankyrin repeat domain 36 
LOC400986             0.685   PREDICTED: protein immuno-reactive with anti-PTH po...
LOC100133923          0.479   PREDICTED: similar to UPF0634 protein C 
ANKRD36B              0.326   ankyrin repeat domain 36B 
LOC100289777          0.323   PREDICTED: hypothetical protein XP_002348316 
LOC400986             0.135   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36               0.117   PREDICTED: ankyrin repeat domain 36 
NEFH                  0.035   neurofilament, heavy polypeptide 200kDa 
TRDN                  0.030   triadin 
DSPP                  0.028   dentin sialophosphoprotein preproprotein 
NOLC1                 0.028   nucleolar and coiled-body phosphoprotein 1 
RBBP6                 0.028   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.028   retinoblastoma-binding protein 6 isoform 1 
ANKRD30A              0.027   ankyrin repeat domain 30A 
TCOF1                 0.024   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.024   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.024   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.024   Treacher Collins-Franceschetti syndrome 1 isoform c ...
THOC2                 0.023   THO complex 2 
ATRX                  0.022   transcriptional regulator ATRX isoform 2 
ATRX                  0.022   transcriptional regulator ATRX isoform 1 
ANKRD12               0.022   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.022   ankyrin repeat domain 12 isoform 1 
IWS1                  0.022   IWS1 homolog 
FAM21C                0.022   hypothetical protein LOC253725 
CYLC2                 0.022   cylicin 2 
FAM21A                0.022   hypothetical protein LOC387680 
CYLC1                 0.021   cylicin, basic protein of sperm head cytoskeleton 1...
AFF1                  0.021   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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