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Search of human proteins with 195972905
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|195972905 zinc finger protein 385A isoform b [Homo sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|195972905 zinc finger protein 385A isoform b [Homo sapiens] 625 e-179
gi|195972903 zinc finger protein 385A isoform a [Homo sapiens] 561 e-160
gi|24308079 zinc finger protein 385A isoform c [Homo sapiens] 523 e-149
gi|13375981 zinc finger protein 385D [Homo sapiens] 206 2e-53
gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens] 172 4e-43
gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens] 172 4e-43
gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens] 168 6e-42
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 149 3e-36
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 149 3e-36
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 149 3e-36
gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens] 53 4e-07
gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens] 52 9e-07
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 45 1e-04
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 45 1e-04
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 45 1e-04
gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens] 43 3e-04
gi|6912440 zinc finger protein 346 [Homo sapiens] 42 5e-04
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 42 7e-04
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 40 0.002
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 40 0.003
gi|154744870 zinc finger protein 574 [Homo sapiens] 39 0.007
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 38 0.013
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 38 0.013
gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens] 38 0.013
gi|112421108 capicua homolog [Homo sapiens] 38 0.013
gi|33286436 gametogenetin [Homo sapiens] 38 0.013
gi|111607441 hypothetical protein LOC400506 [Homo sapiens] 37 0.017
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 37 0.022
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 37 0.022
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 37 0.028
>gi|195972905 zinc finger protein 385A isoform b [Homo sapiens]
Length = 305
Score = 625 bits (1611), Expect = e-179
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSH 60
MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSH
Sbjct: 1 MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSH 60
Query: 61 TFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP 120
TFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP
Sbjct: 61 TFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP 120
Query: 121 GDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTF 180
GDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTF
Sbjct: 121 GDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTF 180
Query: 181 HCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPK 240
HCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPK
Sbjct: 181 HCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPK 240
Query: 241 SLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPI 300
SLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPI
Sbjct: 241 SLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPI 300
Query: 301 LFSPY 305
LFSPY
Sbjct: 301 LFSPY 305
>gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]
Length = 386
Score = 561 bits (1447), Expect = e-160
Identities = 296/386 (76%), Positives = 298/386 (77%), Gaps = 81/386 (20%)
Query: 1 MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSH 60
MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSH
Sbjct: 1 MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSH 60
Query: 61 TFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP 120
TFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP
Sbjct: 61 TFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP 120
Query: 121 GD--------------------------------------PAPP-----GSTPTNGDGVA 137
GD P+PP G T G+G
Sbjct: 121 GDPAPPGSTPTNGDGVAPRPVSMENGLGPAPGSPEKQPGSPSPPSIPETGQGVTKGEGGT 180
Query: 138 PRP--------------------------------------GTKHKTILEARSGLGPIKA 159
P P GTKHKTILEARSGLGPIKA
Sbjct: 181 PAPASLPGGSKEEEEKAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTILEARSGLGPIKA 240
Query: 160 YPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRH 219
YPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRH
Sbjct: 241 YPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRH 300
Query: 220 KKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGP 279
KKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGP
Sbjct: 301 KKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGP 360
Query: 280 PITHPLLHPAPGPIRTAHGPILFSPY 305
PITHPLLHPAPGPIRTAHGPILFSPY
Sbjct: 361 PITHPLLHPAPGPIRTAHGPILFSPY 386
>gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]
Length = 366
Score = 523 bits (1347), Expect = e-149
Identities = 276/366 (75%), Positives = 278/366 (75%), Gaps = 81/366 (22%)
Query: 21 MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPLLKTKRPVISCNICQ 80
MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPLLKTKRPVISCNICQ
Sbjct: 1 MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPLLKTKRPVISCNICQ 60
Query: 81 IRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGD------------------ 122
IRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGD
Sbjct: 61 IRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDGVAPRP 120
Query: 123 --------------------PAPP-----GSTPTNGDGVAPRP----------------- 140
P+PP G T G+G P P
Sbjct: 121 VSMENGLGPAPGSPEKQPGSPSPPSIPETGQGVTKGEGGTPAPASLPGGSKEEEEKAKRL 180
Query: 141 ---------------------GTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRT 179
GTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRT
Sbjct: 181 LYCALCKVAVNSLSQLEAHNKGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRT 240
Query: 180 FHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELP 239
FHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELP
Sbjct: 241 FHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELP 300
Query: 240 KSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGP 299
KSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGP
Sbjct: 301 KSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGP 360
Query: 300 ILFSPY 305
ILFSPY
Sbjct: 361 ILFSPY 366
>gi|13375981 zinc finger protein 385D [Homo sapiens]
Length = 395
Score = 206 bits (525), Expect = 2e-53
Identities = 142/392 (36%), Positives = 180/392 (45%), Gaps = 88/392 (22%)
Query: 1 MILGSLSRAGPLPLLRQPPI--MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVL 58
M G ++ LP L +PP +QP LD+K LPFPL+ A + LF N++ MDP+QKAV+
Sbjct: 5 MYFGGTCQSPALPALVRPPAPPLQPSLDIKPFLPFPLDTAAAVNLFPNFNAMDPIQKAVI 64
Query: 59 SHTFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVR 118
+HTFG PL ++ +ISCNICQ+RFNS SQA AHYKG +HA+++K +EA K + + +
Sbjct: 65 NHTFGVPLPHRRKQIISCNICQLRFNSDSQAAAHYKGTKHAKKLKALEAMKNKQKSVTAK 124
Query: 119 EPGDPAPPGSTPT-------NGDGVAPRPGTKHKTILEARSG------------LGPIKA 159
+ T DG A P T +E R P A
Sbjct: 125 DSAKTTFTSITTNTINTSSDKTDGTAGTPAISTTTTVEIRKSSVMTTEITSKVEKSPTTA 184
Query: 160 YPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRH--------------- 204
P+ E E R +C +C V VNS QL+ H S +H
Sbjct: 185 TGNSSCPST-ETEEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGTIKA 243
Query: 205 --RDGVAGK------------------------------PNPLLSRHKKSRGAGE----- 227
R GV GK + SR K R AG+
Sbjct: 244 FPRAGVKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAAGKPPKPK 303
Query: 228 -------------LAGTLTFSKELPKSLAGGLLPSPLAVAAVMAA-AAGSPLSLRPAPAA 273
L L FSKE K LA +LP+PLA AA AA A SP SLR APAA
Sbjct: 304 YSPYNKLQKTAHPLGVKLVFSKEPSKPLAPRILPNPLAAAAAAAAVAVSSPFSLRTAPAA 363
Query: 274 PLLQGPPITHPLLHPAPGPIRTAHGPILFSPY 305
L Q + LL PAPGPIRTAH P+LF+PY
Sbjct: 364 TLFQTSALPPALLRPAPGPIRTAHTPVLFAPY 395
>gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens]
Length = 395
Score = 172 bits (435), Expect = 4e-43
Identities = 138/398 (34%), Positives = 182/398 (45%), Gaps = 107/398 (26%)
Query: 4 GSLSRAGPLPLLRQPP--IMQPPLDLKQILPFPLEPAPTLGLFSNYSTMD---------- 51
GS LP L + P +MQP LD+K + FP++ + +GLF N++TMD
Sbjct: 9 GSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHT 68
Query: 52 ------PVQKAVLS----------------HTFGGP---------LLKTKRPVI------ 74
P +K V+S H G K K ++
Sbjct: 69 FGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSA 128
Query: 75 ----SCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPG---VREPGDPAPPG 127
SC+I I N+ ++E KG ++K +++ E G ++ P PPG
Sbjct: 129 KANPSCSITPITGNNSDKSED--KG-----KLKASSSSQPSSSESGSFLLKSGTTPLPPG 181
Query: 128 S--TPTNGDGVAP---------------------------------RPGTKHKTILEARS 152
+ +P+ AP G+KHKT++EAR+
Sbjct: 182 AATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARN 241
Query: 153 GLGPIKAYPRLGPPTP---GEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVA 209
G GPIK+YPR G G + Q++TFHCEIC+V VNSE+QLKQHISSRRH+D VA
Sbjct: 242 GAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVA 301
Query: 210 GKP-NPLLSRHKK-SRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSL 267
GKP P S + K R LA L F K++ K LA L SPLA AAA S LSL
Sbjct: 302 GKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAA----AAAVSSALSL 357
Query: 268 RPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPILFSPY 305
P P+A L Q P I LL P GPIR ILF+PY
Sbjct: 358 PPRPSASLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
>gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens]
Length = 471
Score = 172 bits (435), Expect = 4e-43
Identities = 138/398 (34%), Positives = 182/398 (45%), Gaps = 107/398 (26%)
Query: 4 GSLSRAGPLPLLRQPP--IMQPPLDLKQILPFPLEPAPTLGLFSNYSTMD---------- 51
GS LP L + P +MQP LD+K + FP++ + +GLF N++TMD
Sbjct: 85 GSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHT 144
Query: 52 ------PVQKAVLS----------------HTFGGP---------LLKTKRPVI------ 74
P +K V+S H G K K ++
Sbjct: 145 FGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSA 204
Query: 75 ----SCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPG---VREPGDPAPPG 127
SC+I I N+ ++E KG ++K +++ E G ++ P PPG
Sbjct: 205 KANPSCSITPITGNNSDKSED--KG-----KLKASSSSQPSSSESGSFLLKSGTTPLPPG 257
Query: 128 S--TPTNGDGVAP---------------------------------RPGTKHKTILEARS 152
+ +P+ AP G+KHKT++EAR+
Sbjct: 258 AATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARN 317
Query: 153 GLGPIKAYPRLGPPTP---GEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVA 209
G GPIK+YPR G G + Q++TFHCEIC+V VNSE+QLKQHISSRRH+D VA
Sbjct: 318 GAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVA 377
Query: 210 GKP-NPLLSRHKK-SRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSL 267
GKP P S + K R LA L F K++ K LA L SPLA AAA S LSL
Sbjct: 378 GKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAA----AAAVSSALSL 433
Query: 268 RPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPILFSPY 305
P P+A L Q P I LL P GPIR ILF+PY
Sbjct: 434 PPRPSASLFQAPAIPPALLRPGHGPIRATPASILFAPY 471
Score = 47.0 bits (110), Expect = 2e-05
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 29/180 (16%)
Query: 66 LLKTKRPVIS--CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDP 123
L K K+ ++ C +C I+ NS +QA+ H G H +RVK + + + P P
Sbjct: 24 LSKEKKKILFSFCEVCNIQLNSAAQAQVHSNGKSHRKRVK--QLSDGQPPPPAQASPSSN 81
Query: 124 APPGST--PTNGDGVAPRPGTKHKTILEAR----------SGLGPIKAYPRLGP------ 165
+ GST T + P + L+ + S +G + + P
Sbjct: 82 SSTGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVI 141
Query: 166 -PTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHR------DGVAGKPNPLLSR 218
T G P + + C +C ++ NS+ Q + H +H D KP + S+
Sbjct: 142 NHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSK 201
>gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens]
Length = 369
Score = 168 bits (425), Expect = 6e-42
Identities = 132/380 (34%), Positives = 175/380 (46%), Gaps = 105/380 (27%)
Query: 20 IMQPPLDLKQILPFPLEPAPTLGLFSNYSTMD----------------PVQKAVLS---- 59
+MQP LD+K + FP++ + +GLF N++TMD P +K V+S
Sbjct: 1 MMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVC 60
Query: 60 ------------HTFGGP---------LLKTKRPVI----------SCNICQIRFNSQSQ 88
H G K K ++ SC+I I N+ +
Sbjct: 61 QLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGNNSDK 120
Query: 89 AEAHYKGNRHARRVKGIEAAKTRGREPG---VREPGDPAPPGS--TPTNGDGVAP----- 138
+E KG ++K +++ E G ++ P PPG+ +P+ AP
Sbjct: 121 SED--KG-----KLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVE 173
Query: 139 ----------------------------RPGTKHKTILEARSGLGPIKAYPRLGPPTP-- 168
G+KHKT++EAR+G GPIK+YPR G
Sbjct: 174 SEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKMQ 233
Query: 169 -GEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKP-NPLLSRHKK-SRGA 225
G + Q++TFHCEIC+V VNSE+QLKQHISSRRH+D VAGKP P S + K R
Sbjct: 234 NGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSP 293
Query: 226 GELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPL 285
LA L F K++ K LA L SPLA AAA S LSL P P+A L Q P I L
Sbjct: 294 SILAAKLAFQKDMMKPLAPAFLSSPLAA----AAAVSSALSLPPRPSASLFQAPAIPPAL 349
Query: 286 LHPAPGPIRTAHGPILFSPY 305
L P GPIR ILF+PY
Sbjct: 350 LRPGHGPIRATPASILFAPY 369
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 149 bits (376), Expect = 3e-36
Identities = 110/305 (36%), Positives = 138/305 (45%), Gaps = 55/305 (18%)
Query: 11 PLPLLRQPPI----MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPL 66
P PLL P+ +QPPLD K +L F A L LF N+STMDPVQKAV+SHTFG P
Sbjct: 670 PSPLLASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQKAVISHTFGVPS 729
Query: 67 LKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGR------------- 113
K+ ISCNIC +RFNS +QAEAHYKG++HAR++K +EAAK++ R
Sbjct: 730 PLKKKLFISCNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKSKQRPHTQAQDGAVVSP 789
Query: 114 ----------EPGVREPGDP--APPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKA-- 159
EP + P P PP P D P H +L+A S
Sbjct: 790 IPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPA--HSELLDAASSSSSSSCPP 847
Query: 160 -YPRLGPPTPG-EPEAPAQDRTF-----------HCEICNVKVNSEVQLKQHISSRRHR- 205
P G PG EP A A + +C C V VNS QL+ H + +HR
Sbjct: 848 CSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTCKVTVNSASQLQAHNTGAKHRW 907
Query: 206 --DGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGS 263
+G G P R GAG A +T + G PSP A+ S
Sbjct: 908 MMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGR------GGRQGPSPAFHCALCQLQVNS 961
Query: 264 PLSLR 268
L+
Sbjct: 962 ETQLK 966
Score = 125 bits (314), Expect = 5e-29
Identities = 91/245 (37%), Positives = 118/245 (48%), Gaps = 44/245 (17%)
Query: 68 KTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPG 127
++++ + C C++ NS SQ +AH G +H ++G A R R G P G
Sbjct: 875 RSEKGHLYCPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSR-------GRPVSRG 927
Query: 128 STPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNV 187
G K K + R G R GP +PA FHC +C +
Sbjct: 928 GA-----------GHKAKRVTGGRGG--------RQGP-------SPA----FHCALCQL 957
Query: 188 KVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELA-----GTLTFSKELPKSL 242
+VNSE QLKQH+SSRRH+D +AGK S+H K + LA L K+L K+L
Sbjct: 958 QVNSETQLKQHMSSRRHKDRLAGKTPKPSSQHSKLQKHAALAVSILKSKLALQKQLTKTL 1017
Query: 243 AGGLLPSPLAVAAVMAAAAGSPLSLRPAP-AAPLLQGPPITHPLLHPAP-GPIRTAHGPI 300
A LPSPL AA A PL+LRPAP AA L PI P L P G +R A GPI
Sbjct: 1018 AARFLPSPLPTAATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGAVRPATGPI 1077
Query: 301 LFSPY 305
+ +PY
Sbjct: 1078 VLAPY 1082
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 149 bits (376), Expect = 3e-36
Identities = 110/305 (36%), Positives = 138/305 (45%), Gaps = 55/305 (18%)
Query: 11 PLPLLRQPPI----MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPL 66
P PLL P+ +QPPLD K +L F A L LF N+STMDPVQKAV+SHTFG P
Sbjct: 670 PSPLLASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQKAVISHTFGVPS 729
Query: 67 LKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGR------------- 113
K+ ISCNIC +RFNS +QAEAHYKG++HAR++K +EAAK++ R
Sbjct: 730 PLKKKLFISCNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKSKQRPHTQAQDGAVVSP 789
Query: 114 ----------EPGVREPGDP--APPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKA-- 159
EP + P P PP P D P H +L+A S
Sbjct: 790 IPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPA--HSELLDAASSSSSSSCPP 847
Query: 160 -YPRLGPPTPG-EPEAPAQDRTF-----------HCEICNVKVNSEVQLKQHISSRRHR- 205
P G PG EP A A + +C C V VNS QL+ H + +HR
Sbjct: 848 CSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTCKVTVNSASQLQAHNTGAKHRW 907
Query: 206 --DGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGS 263
+G G P R GAG A +T + G PSP A+ S
Sbjct: 908 MMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGR------GGRQGPSPAFHCALCQLQVNS 961
Query: 264 PLSLR 268
L+
Sbjct: 962 ETQLK 966
Score = 125 bits (314), Expect = 5e-29
Identities = 91/245 (37%), Positives = 118/245 (48%), Gaps = 44/245 (17%)
Query: 68 KTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPG 127
++++ + C C++ NS SQ +AH G +H ++G A R R G P G
Sbjct: 875 RSEKGHLYCPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSR-------GRPVSRG 927
Query: 128 STPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNV 187
G K K + R G R GP +PA FHC +C +
Sbjct: 928 GA-----------GHKAKRVTGGRGG--------RQGP-------SPA----FHCALCQL 957
Query: 188 KVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELA-----GTLTFSKELPKSL 242
+VNSE QLKQH+SSRRH+D +AGK S+H K + LA L K+L K+L
Sbjct: 958 QVNSETQLKQHMSSRRHKDRLAGKTPKPSSQHSKLQKHAALAVSILKSKLALQKQLTKTL 1017
Query: 243 AGGLLPSPLAVAAVMAAAAGSPLSLRPAP-AAPLLQGPPITHPLLHPAP-GPIRTAHGPI 300
A LPSPL AA A PL+LRPAP AA L PI P L P G +R A GPI
Sbjct: 1018 AARFLPSPLPTAATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGAVRPATGPI 1077
Query: 301 LFSPY 305
+ +PY
Sbjct: 1078 VLAPY 1082
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 149 bits (376), Expect = 3e-36
Identities = 110/305 (36%), Positives = 138/305 (45%), Gaps = 55/305 (18%)
Query: 11 PLPLLRQPPI----MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPL 66
P PLL P+ +QPPLD K +L F A L LF N+STMDPVQKAV+SHTFG P
Sbjct: 670 PSPLLASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQKAVISHTFGVPS 729
Query: 67 LKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGR------------- 113
K+ ISCNIC +RFNS +QAEAHYKG++HAR++K +EAAK++ R
Sbjct: 730 PLKKKLFISCNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKSKQRPHTQAQDGAVVSP 789
Query: 114 ----------EPGVREPGDP--APPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKA-- 159
EP + P P PP P D P H +L+A S
Sbjct: 790 IPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPA--HSELLDAASSSSSSSCPP 847
Query: 160 -YPRLGPPTPG-EPEAPAQDRTF-----------HCEICNVKVNSEVQLKQHISSRRHR- 205
P G PG EP A A + +C C V VNS QL+ H + +HR
Sbjct: 848 CSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTCKVTVNSASQLQAHNTGAKHRW 907
Query: 206 --DGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGS 263
+G G P R GAG A +T + G PSP A+ S
Sbjct: 908 MMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGR------GGRQGPSPAFHCALCQLQVNS 961
Query: 264 PLSLR 268
L+
Sbjct: 962 ETQLK 966
Score = 125 bits (314), Expect = 5e-29
Identities = 91/245 (37%), Positives = 118/245 (48%), Gaps = 44/245 (17%)
Query: 68 KTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPG 127
++++ + C C++ NS SQ +AH G +H ++G A R R G P G
Sbjct: 875 RSEKGHLYCPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSR-------GRPVSRG 927
Query: 128 STPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNV 187
G K K + R G R GP +PA FHC +C +
Sbjct: 928 GA-----------GHKAKRVTGGRGG--------RQGP-------SPA----FHCALCQL 957
Query: 188 KVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELA-----GTLTFSKELPKSL 242
+VNSE QLKQH+SSRRH+D +AGK S+H K + LA L K+L K+L
Sbjct: 958 QVNSETQLKQHMSSRRHKDRLAGKTPKPSSQHSKLQKHAALAVSILKSKLALQKQLTKTL 1017
Query: 243 AGGLLPSPLAVAAVMAAAAGSPLSLRPAP-AAPLLQGPPITHPLLHPAP-GPIRTAHGPI 300
A LPSPL AA A PL+LRPAP AA L PI P L P G +R A GPI
Sbjct: 1018 AARFLPSPLPTAATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGAVRPATGPI 1077
Query: 301 LFSPY 305
+ +PY
Sbjct: 1078 VLAPY 1082
>gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens]
Length = 288
Score = 52.8 bits (125), Expect = 4e-07
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C F+S + A+AHY+G HA+R++ EA E + G +G
Sbjct: 149 CKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNSFSES--------SELGQRRARKEG 200
Query: 136 VAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGE-PEAPAQDRTFHCEICNVKVNSEVQ 194
+ + + ++ GP PR P + F+C +CNV E++
Sbjct: 201 NEFKMMPNRRNMYTVQNNSGPY-FNPRSRQRIPRDLAMCVTPSGQFYCSMCNVGAGEEME 259
Query: 195 LKQHISSRRHRDGVA 209
+QH+ S++H+ V+
Sbjct: 260 FRQHLESKQHKSKVS 274
Score = 45.1 bits (105), Expect = 8e-05
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 29/129 (22%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C + NS QA+AHY+G H ++++ AA + P + P +TP
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSC---PPPARMSNVVEPAATP----- 123
Query: 136 VAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQL 195
V P P P++G PG A + + C++C+ +S
Sbjct: 124 VVPVP--------------------PQMGSFKPGGRVILATENDY-CKLCDASFSSPAVA 162
Query: 196 KQHISSRRH 204
+ H + H
Sbjct: 163 QAHYQGKNH 171
Score = 32.3 bits (72), Expect = 0.54
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 115 PGVREPGDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPT---PGEP 171
P ++P P+PP S T G P K G + P G GE
Sbjct: 10 PPPKQPS-PSPPMSVATRSTGTLQLPPQKP---------FGQEASLPLAGEEELSKGGEQ 59
Query: 172 EAPAQD--RTFHCEICNVKVNSEVQLKQHISSRRH 204
+ ++ + +C++CNV +NS Q + H + H
Sbjct: 60 DCALEELCKPLYCKLCNVTLNSAQQAQAHYQGKNH 94
>gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens]
Length = 289
Score = 51.6 bits (122), Expect = 9e-07
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAK---TRGREPGVREPGDPAPPGSTPTN 132
C +C F+S + A+AHY+G HA+R++ EA + E G R
Sbjct: 149 CKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNSFSESSELGQRR---------ARKE 199
Query: 133 GDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGE-PEAPAQDRTFHCEICNVKVNS 191
G+ P ++ ++ S GP PR P + F+C +CNV
Sbjct: 200 GNEFKMMPNRRNMYTVQNNSA-GPY-FNPRSRQRIPRDLAMCVTPSGQFYCSMCNVGAGE 257
Query: 192 EVQLKQHISSRRHRDGVA 209
E++ +QH+ S++H+ V+
Sbjct: 258 EMEFRQHLESKQHKSKVS 275
Score = 45.1 bits (105), Expect = 8e-05
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 29/129 (22%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C + NS QA+AHY+G H ++++ AA + P + P +TP
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSC---PPPARMSNVVEPAATP----- 123
Query: 136 VAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQL 195
V P P P++G PG A + + C++C+ +S
Sbjct: 124 VVPVP--------------------PQMGSFKPGGRVILATENDY-CKLCDASFSSPAVA 162
Query: 196 KQHISSRRH 204
+ H + H
Sbjct: 163 QAHYQGKNH 171
Score = 32.3 bits (72), Expect = 0.54
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 115 PGVREPGDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPT---PGEP 171
P ++P P+PP S T G P K G + P G GE
Sbjct: 10 PPPKQPS-PSPPMSVATRSTGTLQLPPQKP---------FGQEASLPLAGEEELSKGGEQ 59
Query: 172 EAPAQD--RTFHCEICNVKVNSEVQLKQHISSRRH 204
+ ++ + +C++CNV +NS Q + H + H
Sbjct: 60 DCALEELCKPLYCKLCNVTLNSAQQAQAHYQGKNH 94
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 44.7 bits (104), Expect = 1e-04
Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 23/99 (23%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C N H +H + V + G PG+ PG P PPG+TPT+
Sbjct: 655 CKVCSYETNISRNLRIHMTSEKHMQNVLMLHQGLPLGLPPGLMGPGPPPPPGATPTS--- 711
Query: 136 VAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAP 174
P + + GP G+P+ P
Sbjct: 712 --------------------PPELFQYFGPQALGQPQTP 730
Score = 37.4 bits (85), Expect = 0.017
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 17/101 (16%)
Query: 69 TKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEA-AKTRGREPGVREPGDPAPPG 127
T +P C +C++ +N S E H + H R +G + +K G E EP + G
Sbjct: 1462 TDKP-FKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGETEG 1520
Query: 128 STPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTP 168
T G P T G I P L PP P
Sbjct: 1521 EVGTEKKG----PDTS-----------GFISGLPFLSPPPP 1546
Score = 37.0 bits (84), Expect = 0.022
Identities = 51/205 (24%), Positives = 78/205 (38%), Gaps = 45/205 (21%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP---GDPAPPGSTPTN 132
C +C ++ + H K ++HA++ + + G G P GD AP GS
Sbjct: 844 CKLCCYGTQLKANFQLHLKTDKHAQKYQLAAHLREGGGAMGTPSPASLGDGAPYGS---- 899
Query: 133 GDGVAP----------RPGTKHKTILEARSGLGPIKAY---PRLGPPTPGEPEAPAQDRT 179
V+P +K K L AR + RLG A+
Sbjct: 900 ---VSPLHLRCNICDFESNSKEKMQLHARGAAHEENSQIYKVRLG----------AELGL 946
Query: 180 FHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKS-RGAGELAGTLTFSKEL 238
+HC +C + S + + QH+ + HRD A + LL + G L L+FS
Sbjct: 947 YHCLLCAWETPSRLAVLQHLRTPAHRDAQAQRRLQLLQNGPTTEEGLAALQSILSFSH-- 1004
Query: 239 PKSLAGGLLPSPLAVAAVMAAAAGS 263
G L +P A V+ A AG+
Sbjct: 1005 ------GQLRTP---AEVVPAEAGN 1020
Score = 32.7 bits (73), Expect = 0.41
Identities = 35/134 (26%), Positives = 47/134 (35%), Gaps = 22/134 (16%)
Query: 166 PTPGEPEAP-----AQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLL---- 216
P GE AP A D+ F C +C V N L+ H+ S H+ G
Sbjct: 1447 PARGEAGAPPTTTAATDKPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGP 1506
Query: 217 SRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLL 276
R ++ GE G + K+ P + S + PL L PA
Sbjct: 1507 ERSQEEPKEGETEGEVGTEKKGPDT-------SGFISGLPFLSPPPPPLDLHRFPA---- 1555
Query: 277 QGPPITHPLLHPAP 290
P T P+L P P
Sbjct: 1556 --PLFTPPVLPPFP 1567
Score = 31.6 bits (70), Expect = 0.91
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 30/128 (23%)
Query: 167 TPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAG 226
T G E + C C+VK + V + H+ SR+H L++ K++ A
Sbjct: 2351 TGGSSEGLLAAQRTDCPYCDVKYDFYVSCRGHLFSRQH-----------LAKLKEAVRA- 2398
Query: 227 ELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAP--------LLQG 278
+ +S L P+P A A+ A A +P S+ P AAP LL G
Sbjct: 2399 ---------QLKSESKCYDLAPAPEAPPALKAPPATTPASM-PLGAAPTLPRLAPVLLSG 2448
Query: 279 PPITHPLL 286
P + P L
Sbjct: 2449 PALAQPPL 2456
Score = 30.8 bits (68), Expect = 1.6
Identities = 47/197 (23%), Positives = 62/197 (31%), Gaps = 28/197 (14%)
Query: 12 LPLLRQPPIMQPPLDLKQ----------ILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHT 61
LP L PP PPLDL + + PFPL P L L + L
Sbjct: 1538 LPFLSPPP---PPLDLHRFPAPLFTPPVLPPFPLVPESLLKLQQQQLLLP----FYLHDL 1590
Query: 62 FGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPG 121
GP L P ++ Q R R G E G P
Sbjct: 1591 KVGPKLTLAGPAPVLSLPAATPPPPPQPPKAELAEREWER----PPMAKEGNEAGPSSPP 1646
Query: 122 DPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFH 181
DP P + T + G + +++ G + PPTP PEA
Sbjct: 1647 DPLPNEAARTAAKALLENFG--FELVIQYNEGKQAVPP-----PPTPPPPEALGGGDKLA 1699
Query: 182 CEICNVKVNSEVQLKQH 198
C C ++ + LK H
Sbjct: 1700 CGACGKLFSNMLILKTH 1716
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 44.7 bits (104), Expect = 1e-04
Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 23/99 (23%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C N H +H + V + G PG+ PG P PPG+TPT+
Sbjct: 571 CKVCSYETNISRNLRIHMTSEKHMQNVLMLHQGLPLGLPPGLMGPGPPPPPGATPTS--- 627
Query: 136 VAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAP 174
P + + GP G+P+ P
Sbjct: 628 --------------------PPELFQYFGPQALGQPQTP 646
Score = 37.4 bits (85), Expect = 0.017
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 17/101 (16%)
Query: 69 TKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEA-AKTRGREPGVREPGDPAPPG 127
T +P C +C++ +N S E H + H R +G + +K G E EP + G
Sbjct: 1378 TDKP-FKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGETEG 1436
Query: 128 STPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTP 168
T G P T G I P L PP P
Sbjct: 1437 EVGTEKKG----PDTS-----------GFISGLPFLSPPPP 1462
Score = 37.0 bits (84), Expect = 0.022
Identities = 51/205 (24%), Positives = 78/205 (38%), Gaps = 45/205 (21%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP---GDPAPPGSTPTN 132
C +C ++ + H K ++HA++ + + G G P GD AP GS
Sbjct: 760 CKLCCYGTQLKANFQLHLKTDKHAQKYQLAAHLREGGGAMGTPSPASLGDGAPYGS---- 815
Query: 133 GDGVAP----------RPGTKHKTILEARSGLGPIKAY---PRLGPPTPGEPEAPAQDRT 179
V+P +K K L AR + RLG A+
Sbjct: 816 ---VSPLHLRCNICDFESNSKEKMQLHARGAAHEENSQIYKVRLG----------AELGL 862
Query: 180 FHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKS-RGAGELAGTLTFSKEL 238
+HC +C + S + + QH+ + HRD A + LL + G L L+FS
Sbjct: 863 YHCLLCAWETPSRLAVLQHLRTPAHRDAQAQRRLQLLQNGPTTEEGLAALQSILSFSH-- 920
Query: 239 PKSLAGGLLPSPLAVAAVMAAAAGS 263
G L +P A V+ A AG+
Sbjct: 921 ------GQLRTP---AEVVPAEAGN 936
Score = 32.7 bits (73), Expect = 0.41
Identities = 35/134 (26%), Positives = 47/134 (35%), Gaps = 22/134 (16%)
Query: 166 PTPGEPEAP-----AQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLL---- 216
P GE AP A D+ F C +C V N L+ H+ S H+ G
Sbjct: 1363 PARGEAGAPPTTTAATDKPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGP 1422
Query: 217 SRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLL 276
R ++ GE G + K+ P + S + PL L PA
Sbjct: 1423 ERSQEEPKEGETEGEVGTEKKGPDT-------SGFISGLPFLSPPPPPLDLHRFPA---- 1471
Query: 277 QGPPITHPLLHPAP 290
P T P+L P P
Sbjct: 1472 --PLFTPPVLPPFP 1483
Score = 31.6 bits (70), Expect = 0.91
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 30/128 (23%)
Query: 167 TPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAG 226
T G E + C C+VK + V + H+ SR+H L++ K++ A
Sbjct: 2267 TGGSSEGLLAAQRTDCPYCDVKYDFYVSCRGHLFSRQH-----------LAKLKEAVRA- 2314
Query: 227 ELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAP--------LLQG 278
+ +S L P+P A A+ A A +P S+ P AAP LL G
Sbjct: 2315 ---------QLKSESKCYDLAPAPEAPPALKAPPATTPASM-PLGAAPTLPRLAPVLLSG 2364
Query: 279 PPITHPLL 286
P + P L
Sbjct: 2365 PALAQPPL 2372
Score = 30.8 bits (68), Expect = 1.6
Identities = 47/197 (23%), Positives = 62/197 (31%), Gaps = 28/197 (14%)
Query: 12 LPLLRQPPIMQPPLDLKQ----------ILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHT 61
LP L PP PPLDL + + PFPL P L L + L
Sbjct: 1454 LPFLSPPP---PPLDLHRFPAPLFTPPVLPPFPLVPESLLKLQQQQLLLP----FYLHDL 1506
Query: 62 FGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPG 121
GP L P ++ Q R R G E G P
Sbjct: 1507 KVGPKLTLAGPAPVLSLPAATPPPPPQPPKAELAEREWER----PPMAKEGNEAGPSSPP 1562
Query: 122 DPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFH 181
DP P + T + G + +++ G + PPTP PEA
Sbjct: 1563 DPLPNEAARTAAKALLENFG--FELVIQYNEGKQAVPP-----PPTPPPPEALGGGDKLA 1615
Query: 182 CEICNVKVNSEVQLKQH 198
C C ++ + LK H
Sbjct: 1616 CGACGKLFSNMLILKTH 1632
>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 44.7 bits (104), Expect = 1e-04
Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 23/99 (23%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C N H +H + V + G PG+ PG P PPG+TPT+
Sbjct: 571 CKVCSYETNISRNLRIHMTSEKHMQNVLMLHQGLPLGLPPGLMGPGPPPPPGATPTS--- 627
Query: 136 VAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAP 174
P + + GP G+P+ P
Sbjct: 628 --------------------PPELFQYFGPQALGQPQTP 646
Score = 37.4 bits (85), Expect = 0.017
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 17/101 (16%)
Query: 69 TKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEA-AKTRGREPGVREPGDPAPPG 127
T +P C +C++ +N S E H + H R +G + +K G E EP + G
Sbjct: 1378 TDKP-FKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGETEG 1436
Query: 128 STPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTP 168
T G P T G I P L PP P
Sbjct: 1437 EVGTEKKG----PDTS-----------GFISGLPFLSPPPP 1462
Score = 37.0 bits (84), Expect = 0.022
Identities = 51/205 (24%), Positives = 78/205 (38%), Gaps = 45/205 (21%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP---GDPAPPGSTPTN 132
C +C ++ + H K ++HA++ + + G G P GD AP GS
Sbjct: 760 CKLCCYGTQLKANFQLHLKTDKHAQKYQLAAHLREGGGAMGTPSPASLGDGAPYGS---- 815
Query: 133 GDGVAP----------RPGTKHKTILEARSGLGPIKAY---PRLGPPTPGEPEAPAQDRT 179
V+P +K K L AR + RLG A+
Sbjct: 816 ---VSPLHLRCNICDFESNSKEKMQLHARGAAHEENSQIYKVRLG----------AELGL 862
Query: 180 FHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKS-RGAGELAGTLTFSKEL 238
+HC +C + S + + QH+ + HRD A + LL + G L L+FS
Sbjct: 863 YHCLLCAWETPSRLAVLQHLRTPAHRDAQAQRRLQLLQNGPTTEEGLAALQSILSFSH-- 920
Query: 239 PKSLAGGLLPSPLAVAAVMAAAAGS 263
G L +P A V+ A AG+
Sbjct: 921 ------GQLRTP---AEVVPAEAGN 936
Score = 32.7 bits (73), Expect = 0.41
Identities = 35/134 (26%), Positives = 47/134 (35%), Gaps = 22/134 (16%)
Query: 166 PTPGEPEAP-----AQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLL---- 216
P GE AP A D+ F C +C V N L+ H+ S H+ G
Sbjct: 1363 PARGEAGAPPTTTAATDKPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGP 1422
Query: 217 SRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLL 276
R ++ GE G + K+ P + S + PL L PA
Sbjct: 1423 ERSQEEPKEGETEGEVGTEKKGPDT-------SGFISGLPFLSPPPPPLDLHRFPA---- 1471
Query: 277 QGPPITHPLLHPAP 290
P T P+L P P
Sbjct: 1472 --PLFTPPVLPPFP 1483
Score = 31.6 bits (70), Expect = 0.91
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 30/128 (23%)
Query: 167 TPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAG 226
T G E + C C+VK + V + H+ SR+H L++ K++ A
Sbjct: 2267 TGGSSEGLLAAQRTDCPYCDVKYDFYVSCRGHLFSRQH-----------LAKLKEAVRA- 2314
Query: 227 ELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAP--------LLQG 278
+ +S L P+P A A+ A A +P S+ P AAP LL G
Sbjct: 2315 ---------QLKSESKCYDLAPAPEAPPALKAPPATTPASM-PLGAAPTLPRLAPVLLSG 2364
Query: 279 PPITHPLL 286
P + P L
Sbjct: 2365 PALAQPPL 2372
Score = 30.8 bits (68), Expect = 1.6
Identities = 47/197 (23%), Positives = 62/197 (31%), Gaps = 28/197 (14%)
Query: 12 LPLLRQPPIMQPPLDLKQ----------ILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHT 61
LP L PP PPLDL + + PFPL P L L + L
Sbjct: 1454 LPFLSPPP---PPLDLHRFPAPLFTPPVLPPFPLVPESLLKLQQQQLLLP----FYLHDL 1506
Query: 62 FGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPG 121
GP L P ++ Q R R G E G P
Sbjct: 1507 KVGPKLTLAGPAPVLSLPAATPPPPPQPPKAELAEREWER----PPMAKEGNEAGPSSPP 1562
Query: 122 DPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFH 181
DP P + T + G + +++ G + PPTP PEA
Sbjct: 1563 DPLPNEAARTAAKALLENFG--FELVIQYNEGKQAVPP-----PPTPPPPEALGGGDKLA 1615
Query: 182 CEICNVKVNSEVQLKQH 198
C C ++ + LK H
Sbjct: 1616 CGACGKLFSNMLILKTH 1632
>gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens]
Length = 229
Score = 43.1 bits (100), Expect = 3e-04
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 19/154 (12%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPG-----VREPG-DPAPPGST 129
C +C + F S A++HY+G HA+R+K + KT + ++ P D AP ++
Sbjct: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLKPPRMDTAPVVAS 136
Query: 130 P---TNGDGVA---------PRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQD 177
P + D P +H + + + +LG T E
Sbjct: 137 PYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLG-TTLDMGELRGLR 195
Query: 178 RTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGK 211
R + C IC+V +NS Q H+ +H+ + K
Sbjct: 196 RNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 229
Score = 32.3 bits (72), Expect = 0.54
Identities = 41/181 (22%), Positives = 66/181 (36%), Gaps = 29/181 (16%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVK----------GIEAAKTRGREPGVREPGD--- 122
C +C + S+SQ AHY+ +HA +V+ G A + R + D
Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNK 75
Query: 123 ----------PAPPGSTPTNGDGVAPRPG--TKHKTILE-ARSGLGPIKAYPRLGPPTPG 169
A + G A R KT L+ + L P+K PR+
Sbjct: 76 CCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLKP-PRMDTAPVV 134
Query: 170 EPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELA 229
+D +C +C N+ + +QH ++H+ A LL + + GEL
Sbjct: 135 ASPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARV--ALLEQLGTTLDMGELR 192
Query: 230 G 230
G
Sbjct: 193 G 193
>gi|6912440 zinc finger protein 346 [Homo sapiens]
Length = 294
Score = 42.4 bits (98), Expect = 5e-04
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGST--PTNG 133
C IC + F+S A++HY G HA+ +K + + RE DP S T
Sbjct: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
Query: 134 DGVAPRP---GTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVN 190
D V + G KH+ + + L + Y RL P + A + + C+ C + +N
Sbjct: 196 DPVMAQQHYVGKKHR---KQETKLKLMARYGRLADPAVTDFPA---GKGYPCKTCKIVLN 249
Query: 191 SEVQLKQHISSRRHRD 206
S Q + H+S +H++
Sbjct: 250 SIEQYQAHVSGFKHKN 265
Score = 37.7 bits (86), Expect = 0.013
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C S+SQ AHY+ +HA +VK A G + D S + +
Sbjct: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
Query: 136 VAPRPGTKHKTILEARSG-LGPIKAYPRLGPPTPGEPEAPAQDRTF-----HCEICNVKV 189
P + + A+S LG A + EA Q+R C +C+
Sbjct: 135 CCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATF 194
Query: 190 NSEVQLKQHISSRRHR 205
N V +QH ++HR
Sbjct: 195 NDPVMAQQHYVGKKHR 210
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 42.0 bits (97), Expect = 7e-04
Identities = 51/184 (27%), Positives = 71/184 (38%), Gaps = 17/184 (9%)
Query: 118 REPGDPAPPGSTPTNGD-GVAPRPGTKHKTILEARSGLGPIKAY-PRLG--PPTPGEP-- 171
R P P P S P + G P PG K G+G + A PRL PPTP E
Sbjct: 623 RRPESPRPRVSFPKTPEVGPGPPPGPLSKAPQPVPPGVGELPARGPRLFDFPPTPLEDQF 682
Query: 172 EAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKP---NPLLSRHKKSRGAGEL 228
E PA+ + + N+ + +++ ++H GVA +P P S +S +
Sbjct: 683 EEPAEFKILPDGLANIMKMLDESIRKEEEQQQHEAGVAPQPPLKEPFAS--LQSPFPTDT 740
Query: 229 AGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHP 288
A T T P + A P +L P P PL + PP + P P
Sbjct: 741 APTTT----APAVAVTTTTTTTTTTTATQEEEKKPPPALPPPP--PLAKFPPPSQPQPPP 794
Query: 289 APGP 292
P P
Sbjct: 795 PPPP 798
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 40.4 bits (93), Expect = 0.002
Identities = 45/185 (24%), Positives = 65/185 (35%), Gaps = 45/185 (24%)
Query: 74 ISCNICQIRFNSQSQAEAHYKGNRHARRVK----------GIEAAKTRGREPGVR-EPGD 122
+ C++C + AH +G++H + K +E A PG +P
Sbjct: 319 LHCDLCAVSCTGADAYAAHIRGSKHQKVFKLHAKLGKPIPTLEPALATESPPGAEAKPTS 378
Query: 123 PAPPGSTPTNGDGVAPRPGTKHKTILEA-----RSGLGPI---KAYPRL-GPPTP---GE 170
P P ++ +A RP K + E +G P A P+L GP P G
Sbjct: 379 PTGPSVCASSRPALAKRP-VASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQGGS 437
Query: 171 PEAPA---------------------QDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVA 209
EAPA + FHC++C N H+ RRHR
Sbjct: 438 KEAPAGCSDAQPVGPEYVEEVFSDEGRVLRFHCKLCECSFNDLNAKDLHVRGRRHRLQYR 497
Query: 210 GKPNP 214
K NP
Sbjct: 498 KKVNP 502
Score = 35.4 bits (80), Expect = 0.063
Identities = 50/178 (28%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 7 SRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPL 66
S A P QPP PP Q LP P PAP S + P + L GP
Sbjct: 212 SAASPFYPPAQPP---PPPGPPQQLPPP--PAPAGSGSSPRADSKPPLPSKLPRPKAGP- 265
Query: 67 LKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAP- 125
+ + C+IC+I H G +H ++ EAA+ G +P G A
Sbjct: 266 --RQLQLHYCDICKISCAGPQTYREHLGGQKHRKK----EAAQKTGVQPNGSPRGVQAQL 319
Query: 126 ----PGSTPTNGDGVAPR-PGTKHKTILEARSGLGPIKAYPRLGP--PTPGEPEAPAQ 176
+ T D A G+KH+ + + + LG K P L P T P A A+
Sbjct: 320 HCDLCAVSCTGADAYAAHIRGSKHQKVFKLHAKLG--KPIPTLEPALATESPPGAEAK 375
Score = 34.7 bits (78), Expect = 0.11
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 21/95 (22%)
Query: 115 PGVREPGDPAPPGSTPTN----GDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGE 170
P + P P PP P G G +PR +K P L P
Sbjct: 219 PPAQPPPPPGPPQQLPPPPAPAGSGSSPRADSK-----------------PPLPSKLPRP 261
Query: 171 PEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHR 205
P Q + +C+IC + ++H+ ++HR
Sbjct: 262 KAGPRQLQLHYCDICKISCAGPQTYREHLGGQKHR 296
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 40.0 bits (92), Expect = 0.003
Identities = 71/306 (23%), Positives = 107/306 (34%), Gaps = 62/306 (20%)
Query: 12 LPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGG-PLL--- 67
LP + P P+DL + P P + P + DP + AV S G P L
Sbjct: 653 LPPVDAVPSGPAPVDLALVDPVPNDLTPVDPVLVKSRPTDPRRGAVSSALGGSAPQLLVE 712
Query: 68 -------KTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREP 120
KT P + + ++ S + A H R + E + R + E
Sbjct: 713 SESLDPPKTIIPEVKEVVDSLKIESGTSATTH---EARPRPLSLSEYRRRRQQRQAETEE 769
Query: 121 GDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTF 180
P PP K ++ E +GL I + PP P + A +
Sbjct: 770 RSPQPPTG--------------KWPSLPETPTGLADIPCL--VIPPAPAKKTALQRSPET 813
Query: 181 HCEICNVKV-------NSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLT 233
EIC V V + E + + ++S + V + PLL+R
Sbjct: 814 PLEICLVPVGPSPASPSPEPPVSKPVASSP-TEQVPSQEMPLLARPSP------------ 860
Query: 234 FSKELPKSLAGGLLPSPLAVAAVM---AAAAGSPLSLRP----APAAPLLQGPPITHPLL 286
P +P+P +++A + A G P SL P P+ PL GP + P
Sbjct: 861 -----PVQSVSPAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQPPSLPLSMGPVLPDPFT 915
Query: 287 HPAPGP 292
H AP P
Sbjct: 916 HYAPLP 921
>gi|154744870 zinc finger protein 574 [Homo sapiens]
Length = 896
Score = 38.5 bits (88), Expect = 0.007
Identities = 46/188 (24%), Positives = 61/188 (32%), Gaps = 43/188 (22%)
Query: 60 HTFGGPLLKTKRPVISCNICQIRFNSQSQAEAH---YKGNRHARRVK-----GIEAAKTR 111
H L + V C +C F S S + H + H V G EA
Sbjct: 322 HQLQQHLRSHREGVFKCPLCSRVFPSPSSLDQHLGDHSSESHFLCVDCGLAFGTEALLLA 381
Query: 112 GREPGVREPGDPAPPGST-----------PTNGDGVAPRPGTKHKTILEARSGLGPIKAY 160
R P P G T T+G G P P T P+ +
Sbjct: 382 HRRAHTPNPLHSCPCGKTFVNLTKFLYHRRTHGVGGVPLPTTPVPPE-------EPVIGF 434
Query: 161 PRLGPPTPGEPEA------------PAQDRTFHCEICNVKVNSEVQLKQHIS-----SRR 203
P P GEPEA PA T+ C +C+ + +QL +H RR
Sbjct: 435 PEPAPAETGEPEAPEPPVSEETSAGPAAPGTYRCLLCSREFGKALQLTRHQRFVHRLERR 494
Query: 204 HRDGVAGK 211
H+ + GK
Sbjct: 495 HKCSICGK 502
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 37.7 bits (86), Expect = 0.013
Identities = 59/217 (27%), Positives = 73/217 (33%), Gaps = 47/217 (21%)
Query: 106 EAAKTRGREPGVRE--------PGDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPI 157
E TR R PG RE PG A PG T G A K K R+G
Sbjct: 39 EPPSTRQRPPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRK-----RTGSDSK 93
Query: 158 KAYPRLGPPTPGEPEAPAQDRTFH-------CEICNVKVN---SEVQLKQHISSRRHRDG 207
PR + A + F CE N+ ++ +E Q+K +RR +
Sbjct: 94 SGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK-- 151
Query: 208 VAGKPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSL 267
K++ GA A T GG P P A SPLS
Sbjct: 152 ----------WKKQNPGADTSAPT-----------GGGGGPGPGAGPGTGLPGGLSPLSP 190
Query: 268 RPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPILFSP 304
P APL P +P H G + A P L SP
Sbjct: 191 SPPMGAPLGMHGPAGYP-AHGPGGLVCAAQLPFLSSP 226
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 37.7 bits (86), Expect = 0.013
Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 60/223 (26%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C ++ H + ++H V+ ++ G + G AP +T +G
Sbjct: 701 CEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGN------GEQVFGHSAPAPNTSLSG-- 752
Query: 136 VAPRPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQL 195
G P+P +P+ Q T+ CE+C+ + N L
Sbjct: 753 ---------------------------CGTPSPSKPK---QKPTWRCEVCDYETNVARNL 782
Query: 196 KQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPK-------SLAGGLLP 248
+ H++S +H + LL ++ K G EL + L G L
Sbjct: 783 RIHMTSEKHMHNMM-----LLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLE 837
Query: 249 SPLAVAAVMAAAAGSPLSLRPAPAAPLLQG-----PPITHPLL 286
+P ++ +P L PA AA L G P I+ P L
Sbjct: 838 NPADPQLMI-----NPFQLDPATAAALAPGLGELSPYISDPAL 875
Score = 34.3 bits (77), Expect = 0.14
Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 10/140 (7%)
Query: 158 KAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLS 217
K P P E + ++ + C ICNV + L+ H+ S H+ +
Sbjct: 1526 KVLQEASSPVPQETNSNTDNKPYKCSICNVAYSQSSTLEIHMRSVLHQ---------TKA 1576
Query: 218 RHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQ 277
R K +G +AG + + + S G+L S A L L+
Sbjct: 1577 RAAKLEPSGHVAGGHSIAANV-NSPGQGMLDSMSLAAVNSKDTHLDAKELNKKQTPDLIS 1635
Query: 278 GPPITHPLLHPAPGPIRTAH 297
P HP PA ++ H
Sbjct: 1636 AQPAHHPPQSPAQIQMQLQH 1655
Score = 30.0 bits (66), Expect = 2.7
Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 239 PKSLAG------GLLPSPLAVAAVMAAAAGSP-LSLRPAPAAPLLQGPPITHPLLHPAP 290
P SL G L P + +A SP LSL AP PLLQ PP P P P
Sbjct: 3070 PSSLPGFPQNSNTLTPPGAGMLGFPTSATSSPALSLSSAPTKPLLQTPPPPPPPPPPPP 3128
Score = 28.9 bits (63), Expect = 5.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 182 CEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHK 220
C +C VK ++ + ++ HI S++H V L R K
Sbjct: 2964 CTLCGVKYSARLSIRDHIFSKQHISKVRETVGSQLDREK 3002
>gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens]
Length = 153
Score = 37.7 bits (86), Expect = 0.013
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVR 118
C +C + F S A++HY+G HA+R+K + KT + G+R
Sbjct: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLR 119
Score = 37.4 bits (85), Expect = 0.017
Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 26/150 (17%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
C +C + S+SQ AHY+ +HA +V R + P D P + +G
Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKV----------RLYYMLHPRDGGCPAKRLRSENG 65
Query: 136 VAPRPGTKHK-----------TILEARSGLGPIKAYP---RLGPPTPGEPEAPAQDRTFH 181
K+K ++ G I A LG TP + R +
Sbjct: 66 SDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTP--LKTTGLRRNYR 123
Query: 182 CEICNVKVNSEVQLKQHISSRRHRDGVAGK 211
C IC+V +NS Q H+ +H+ + K
Sbjct: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 37.7 bits (86), Expect = 0.013
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 20/177 (11%)
Query: 34 PLEPAPT-----LGLFSNYSTMDPVQKAVLSHTFGGPLLKTKRPVISCNICQIRFNSQSQ 88
PL PA + LG+F ++ ++P AV P L +P S S++Q
Sbjct: 7 PLMPASSAASRGLGMFV-WTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQ------PSEAQ 59
Query: 89 AEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPA-PPGSTPTNGDGVAPRPGTKHKT- 146
A + + + AA R PG DP PPG+T +P PG H
Sbjct: 60 QPASHPVASNQSKEPAESAAVAHERPPGGTGSADPERPPGATCPE----SPGPGPPHPLG 115
Query: 147 ILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRR 203
++E+ G P GPP GEP ++ + H + ++ E+QL RR
Sbjct: 116 VVESGKGPPPTTEEEASGPP--GEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRR 170
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 37.7 bits (86), Expect = 0.013
Identities = 36/135 (26%), Positives = 47/135 (34%), Gaps = 7/135 (5%)
Query: 6 LSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGP 65
L PLP PP +QPP Q P P+ P T GL S + P L
Sbjct: 434 LQELPPLPPPTPPPTLQPP--ALQPTPLPVAPPLTPGLGHKESALAPTAAPALPPALAAD 491
Query: 66 LLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGV-----REP 120
P + + + + A A RR KG AA+ R+ G+ RE
Sbjct: 492 QAPAPSPAPAPTVAEPSPPVSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHGDGPRER 551
Query: 121 GDPAPPGSTPTNGDG 135
P S+ G G
Sbjct: 552 ATATVPDSSGGGGGG 566
>gi|111607441 hypothetical protein LOC400506 [Homo sapiens]
Length = 458
Score = 37.4 bits (85), Expect = 0.017
Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 14/134 (10%)
Query: 79 CQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDGVAP 138
C + + QA K R + R + K + + + GD P S P+ +P
Sbjct: 184 CSVGKKDEEQAALGQKRKRKSPREHNGKVKKKKK----IHQEGDALPGHSKPSRSMESSP 239
Query: 139 RPGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQH 198
R G+K K P+K P +P+A A+ + + V E LK+
Sbjct: 240 RKGSKKK----------PVKVEAPEYIPISDDPKASAKKKMKSKKKVEQPVIEEPALKRK 289
Query: 199 ISSRRHRDGVAGKP 212
+R GVAG P
Sbjct: 290 KKKKRKESGVAGDP 303
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 37.0 bits (84), Expect = 0.022
Identities = 66/269 (24%), Positives = 88/269 (32%), Gaps = 44/269 (16%)
Query: 59 SHTFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVR 118
SH L+ + C +C +N S RH R K + A +PG
Sbjct: 237 SHLVQHMLVHSGERPYECGVCGRTYNHVSSLI------RHRRCHKDVPPAAGGPPQPGPH 290
Query: 119 EP--GDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIK-AYPRLGPPTPGEPEAP- 174
P G PAP S T G + A S G A + PP G + P
Sbjct: 291 LPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAGVGVPPPATGGGDGPF 350
Query: 175 ----------------------AQDRTFHCEICNVKVNSEVQLKQHISSR-----RHRDG 207
++ F C +C+ N LK+H+ + R G
Sbjct: 351 ACPLCWKVFKKPSHLHQHQIIHTGEKPFSCSVCSKSFNRRESLKRHVKTHSADLLRLPCG 410
Query: 208 VAGKPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSL 267
+ GK S K + A AG P L G +P ++ AA A P +
Sbjct: 411 ICGKAFRDASYLLKHQAAHAGAGAGGPRPVYPCDLCGKSYSAPQSLLRHKAAHA-PPAAA 469
Query: 268 RPAP---AAPLLQGPPITHP---LLHPAP 290
AP AA Q PP P LL P P
Sbjct: 470 AEAPKDGAASAPQPPPTFPPGPYLLPPDP 498
Score = 32.0 bits (71), Expect = 0.70
Identities = 60/235 (25%), Positives = 83/235 (35%), Gaps = 42/235 (17%)
Query: 63 GGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGD 122
GGP RPV C++C +++ H HA EA K
Sbjct: 435 GGP-----RPVYPCDLCGKSYSAPQSLLRHKAA--HAPPAAAAEAPKDGAASA------- 480
Query: 123 PAPPGSTPTNGDGVAPRPGTKHKTILEARS-----GLGPIK---AYPRL----GPPTPGE 170
P PP + P + P P T A + G P+ A+P L G G
Sbjct: 481 PQPPPTFPPGPYLLPPDPPTTDSEKAAAAAAAVVYGAVPVPLLGAHPLLLGGAGTSGAGG 540
Query: 171 PEAPAQDRTFHCEICNVKVNSEVQLKQ----HISSRRHRDGVAGK---PNPLLSRH---- 219
A +TF C IC LK+ H + H+ V GK + LS+H
Sbjct: 541 SGASVPGKTFCCGICGRGFGRRETLKRHERIHTGEKPHQCPVCGKRFRESFHLSKHHVVH 600
Query: 220 -KKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAA 273
++ EL G + P+SL L + +A AAG P S + P A
Sbjct: 601 TRERPYKCELCGKVF---GYPQSLTRHRQVHRLQLPCALAGAAGLP-STQGTPGA 651
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 37.0 bits (84), Expect = 0.022
Identities = 66/269 (24%), Positives = 88/269 (32%), Gaps = 44/269 (16%)
Query: 59 SHTFGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVR 118
SH L+ + C +C +N S RH R K + A +PG
Sbjct: 237 SHLVQHMLVHSGERPYECGVCGRTYNHVSSLI------RHRRCHKDVPPAAGGPPQPGPH 290
Query: 119 EP--GDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIK-AYPRLGPPTPGEPEAP- 174
P G PAP S T G + A S G A + PP G + P
Sbjct: 291 LPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAGVGVPPPATGGGDGPF 350
Query: 175 ----------------------AQDRTFHCEICNVKVNSEVQLKQHISSR-----RHRDG 207
++ F C +C+ N LK+H+ + R G
Sbjct: 351 ACPLCWKVFKKPSHLHQHQIIHTGEKPFSCSVCSKSFNRRESLKRHVKTHSADLLRLPCG 410
Query: 208 VAGKPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSL 267
+ GK S K + A AG P L G +P ++ AA A P +
Sbjct: 411 ICGKAFRDASYLLKHQAAHAGAGAGGPRPVYPCDLCGKSYSAPQSLLRHKAAHA-PPAAA 469
Query: 268 RPAP---AAPLLQGPPITHP---LLHPAP 290
AP AA Q PP P LL P P
Sbjct: 470 AEAPKDGAASAPQPPPTFPPGPYLLPPDP 498
Score = 32.0 bits (71), Expect = 0.70
Identities = 60/235 (25%), Positives = 83/235 (35%), Gaps = 42/235 (17%)
Query: 63 GGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGD 122
GGP RPV C++C +++ H HA EA K
Sbjct: 435 GGP-----RPVYPCDLCGKSYSAPQSLLRHKAA--HAPPAAAAEAPKDGAASA------- 480
Query: 123 PAPPGSTPTNGDGVAPRPGTKHKTILEARS-----GLGPIK---AYPRL----GPPTPGE 170
P PP + P + P P T A + G P+ A+P L G G
Sbjct: 481 PQPPPTFPPGPYLLPPDPPTTDSEKAAAAAAAVVYGAVPVPLLGAHPLLLGGAGTSGAGG 540
Query: 171 PEAPAQDRTFHCEICNVKVNSEVQLKQ----HISSRRHRDGVAGK---PNPLLSRH---- 219
A +TF C IC LK+ H + H+ V GK + LS+H
Sbjct: 541 SGASVPGKTFCCGICGRGFGRRETLKRHERIHTGEKPHQCPVCGKRFRESFHLSKHHVVH 600
Query: 220 -KKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAA 273
++ EL G + P+SL L + +A AAG P S + P A
Sbjct: 601 TRERPYKCELCGKVF---GYPQSLTRHRQVHRLQLPCALAGAAGLP-STQGTPGA 651
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 36.6 bits (83), Expect = 0.028
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 171 PEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGV 208
P+ +R C +CNV ++SEV L H+ R+H+ V
Sbjct: 537 PKLTPYERKKQCSLCNVLISSEVYLFSHVKGRKHQQAV 574
Score = 28.5 bits (62), Expect = 7.7
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGRE 114
C++C + +S+ +H KG +H + V+ E +GRE
Sbjct: 548 CSLCNVLISSEVYLFSHVKGRKHQQAVR--ENTSIQGRE 584
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,183,212
Number of Sequences: 37866
Number of extensions: 1014645
Number of successful extensions: 9151
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 374
Number of HSP's that attempted gapping in prelim test: 7451
Number of HSP's gapped (non-prelim): 2052
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.