Guide to the Human Genome
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Name: ZFHX2 Sequence: fasta or formatted (2706aa) NCBI GI: 169207014
Description:

PREDICTED: zinc finger homeobox 2

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [2790aa] PREDICTED: zinc finger homeobox 2
alt mRNA [2706aa] PREDICTED: zinc finger homeobox 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9        240           2
 C cysteine            2.5         68           2
 D aspartate           3.4         91           2
 E glutamate           7.5        202           6
 F phenylalanine       2.8         77           2
 G glycine             8.8        239           4
 H histidine           2.8         75           2
 I isoleucine          1.6         44           1
 K lysine              4.8        130           8
 L leucine            10.3        279           3
 M methionine          1.4         39           1
 N asparagine          2.3         62           1
 P proline            12.9        350           5
 Q glutamine           4.6        124           4
 R arginine            4.5        121           2
 S serine              8.4        227           3
 T threonine           5.7        154           4
 V valine              4.0        108           4
 W tryptophan          0.8         22           1
 Y tyrosine            2.0         54           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: zinc finger homeobox 2 
ZFHX2                 1.000   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.999   PREDICTED: zinc finger homeobox 2 
ZFHX3                 0.091   AT-binding transcription factor 1 
ZFHX4                 0.085   zinc finger homeodomain 4 
MBD6                  0.009   methyl-CpG binding domain protein 6 
PRR12                 0.009   proline rich 12 
LHX8                  0.009   LIM homeobox 8 
ESX1                  0.009   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
PITX1                 0.008   paired-like homeodomain transcription factor 1 [Hom...
FLJ22184              0.008   PREDICTED: hypothetical protein FLJ22184 
LHX6                  0.008   LIM homeobox protein 6 isoform 2 
LHX6                  0.008   LIM homeobox protein 6 isoform 1 
LMX1B                 0.008   LIM homeobox transcription factor 1, beta 
UNCX                  0.008   UNC homeobox 
LHX9                  0.008   LIM homeobox 9 isoform 1 
LHX9                  0.008   LIM homeobox 9 isoform 2 
RAPH1                 0.008   Ras association and pleckstrin homology domains 1 is...
PHOX2B                0.007   paired-like homeobox 2b 
PROP1                 0.007   PROP paired-like homeobox 1 
ZNF219                0.007   zinc finger protein 219 
ZNF219                0.007   zinc finger protein 219 
ZNF219                0.007   zinc finger protein 219 
FLJ22184              0.007   PREDICTED: hypothetical protein LOC80164 
CUX1                  0.007   cut-like homeobox 1 isoform a 
LHX3                  0.007   LIM homeobox protein 3 isoform a 
LHX3                  0.007   LIM homeobox protein 3 isoform b 
FLJ22184              0.007   PREDICTED: hypothetical protein FLJ22184 
TAF4                  0.007   TBP-associated factor 4 
ARX                   0.007   aristaless related homeobox 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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