Guide to the Human Genome
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Name: ZNF385C Sequence: fasta or formatted (1082aa) NCBI GI: 239756829
Description:

PREDICTED: zinc finger protein 385C

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt mRNA [1082aa] PREDICTED: zinc finger protein 385C
alt mRNA [1082aa] PREDICTED: zinc finger protein 385C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.5        146           4
 C cysteine            2.2         24           1
 D aspartate           3.2         35           1
 E glutamate           5.1         55           2
 F phenylalanine       3.7         40           1
 G glycine             8.4         91           3
 H histidine           3.2         35           1
 I isoleucine          1.3         14           1
 K lysine              4.3         46           3
 L leucine            12.8        138           3
 M methionine          1.2         13           2
 N asparagine          1.6         17           1
 P proline             9.5        103           3
 Q glutamine           4.5         49           1
 R arginine            6.1         66           2
 S serine              7.4         80           7
 T threonine           4.3         46           2
 V valine              5.5         59           2
 W tryptophan          0.9         10           2
 Y tyrosine            1.4         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: zinc finger protein 385C 
ZNF385C               1.000   PREDICTED: zinc finger protein 385C 
ZNF385C               1.000   PREDICTED: zinc finger protein 385C 
ZNF385B               0.119   zinc finger protein 385B isoform 2 
ZNF385B               0.119   zinc finger protein 385B isoform 1 
ZNF385B               0.118   zinc finger protein 385B isoform 3 
ZNF385D               0.118   zinc finger protein 385D 
ZNF385A               0.113   zinc finger protein 385A isoform a 
ZNF385A               0.111   zinc finger protein 385A isoform c 
ZNF385A               0.057   zinc finger protein 385A isoform b 
ZNF862                0.019   zinc finger protein 862 
ZMAT3                 0.016   p53 target zinc finger protein isoform 1 
ZMAT3                 0.014   p53 target zinc finger protein isoform 2 
ZFR2                  0.013   zinc finger RNA binding protein 2 isoform 1 
ZBTB4                 0.013   zinc finger and BTB domain containing 4 
ZBTB4                 0.013   zinc finger and BTB domain containing 4 
LOC100289316          0.012   PREDICTED: hypothetical protein 
LOC100289316          0.012   PREDICTED: hypothetical protein XP_002343619 
CHRNA4                0.011   cholinergic receptor, nicotinic, alpha 4 subunit prec...
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
ZFHX3                 0.010   AT-binding transcription factor 1 
SFRS16                0.010   splicing factor, arginine/serine-rich 16 
TAF4                  0.009   TBP-associated factor 4 
KLF10                 0.009   Kruppel-like factor 10 isoform b 
KLF10                 0.009   Kruppel-like factor 10 isoform a 
WASL                  0.009   Wiskott-Aldrich syndrome gene-like protein 
ZBTB45                0.009   zinc finger and BTB domain containing 45 
SRRM2                 0.009   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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