Guide to the Human Genome
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Name: ZMAT3 Sequence: fasta or formatted (288aa) NCBI GI: 23199978
Description:

p53 target zinc finger protein isoform 2

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [289aa] p53 target zinc finger protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         24           2
 C cysteine            3.5         10           1
 D aspartate           1.4          4           1
 E glutamate           7.3         21           3
 F phenylalanine       2.8          8           1
 G glycine             6.2         18           2
 H histidine           2.4          7           1
 I isoleucine          1.0          3           1
 K lysine              5.9         17           2
 L leucine             7.6         22           2
 M methionine          3.8         11           2
 N asparagine          6.2         18           2
 P proline             9.4         27           3
 Q glutamine           7.3         21           2
 R arginine            6.2         18           2
 S serine              8.7         25           2
 T threonine           2.8          8           1
 V valine              5.2         15           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   p53 target zinc finger protein isoform 2 
ZMAT3                 0.991   p53 target zinc finger protein isoform 1 
ZMAT4                 0.082   zinc finger, matrin type 4 isoform a 
ZMAT4                 0.077   zinc finger, matrin type 4 isoform b 
ZNF346                0.072   zinc finger protein 346 
ZNF385B               0.063   zinc finger protein 385B isoform 3 
ZNF385B               0.063   zinc finger protein 385B isoform 2 
ZNF385B               0.063   zinc finger protein 385B isoform 1 
ZMAT1                 0.061   zinc finger, matrin type 1 isoform 1 
ZNF385C               0.054   PREDICTED: zinc finger protein 385C 
ZNF385C               0.054   PREDICTED: zinc finger protein 385C 
ZNF385C               0.054   PREDICTED: zinc finger protein 385C 
ZNF385A               0.053   zinc finger protein 385A isoform a 
ZNF385A               0.053   zinc finger protein 385A isoform c 
ZNF385A               0.049   zinc finger protein 385A isoform b 
ZNF385D               0.040   zinc finger protein 385D 
ZNF462                0.030   zinc finger protein 462 
ZFR2                  0.025   zinc finger RNA binding protein 2 isoform 1 
ZFHX4                 0.023   zinc finger homeodomain 4 
GPATCH8               0.021   G patch domain containing 8 
CIZ1                  0.021   CDKN1A interacting zinc finger protein 1 isoform 4 ...
CIZ1                  0.021   CDKN1A interacting zinc finger protein 1 isoform 3 ...
CIZ1                  0.021   CDKN1A interacting zinc finger protein 1 isoform 1 ...
CIZ1                  0.021   CDKN1A interacting zinc finger protein 1 isoform 2 ...
CIZ1                  0.021   CDKN1A interacting zinc finger protein 1 isoform 1 [...
ZNF318                0.021   zinc finger protein 318 
ZFHX2                 0.019   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.019   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.019   PREDICTED: zinc finger homeobox 2 
ZNF628                0.019   zinc finger protein 628 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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