Guide to the Human Genome
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Name: ZNF574 Sequence: fasta or formatted (896aa) NCBI GI: 154744870
Description:

zinc finger protein 574

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         94           5
 C cysteine            4.6         41           1
 D aspartate           1.8         16           1
 E glutamate           8.4         75           2
 F phenylalanine       3.3         30           1
 G glycine             6.2         56           2
 H histidine           6.1         55           2
 I isoleucine          1.2         11           1
 K lysine              3.2         29           3
 L leucine             9.0         81           3
 M methionine          1.0          9           2
 N asparagine          1.3         12           2
 P proline             8.8         79           2
 Q glutamine           5.4         48           3
 R arginine            8.1         73           3
 S serine              7.0         63           3
 T threonine           5.4         48           3
 V valine              5.9         53           2
 W tryptophan          0.2          2           1
 Y tyrosine            2.3         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 574 
ZNF526                0.215   zinc finger protein 526 
ZNF91                 0.187   zinc finger protein 91 
ZNF845                0.187   zinc finger protein 845 
ZNF208                0.185   zinc finger protein 208 
ZNF721                0.178   zinc finger protein 721 
ZNF624                0.178   zinc finger protein 624 
ZNF43                 0.175   zinc finger protein 43 
ZNF420                0.175   zinc finger protein 420 
ZNF99                 0.175   zinc finger protein 99 
ZNF665                0.174   zinc finger protein 665 
ZNF160                0.173   zinc finger protein 160 
ZNF160                0.173   zinc finger protein 160 
ZNF160                0.173   zinc finger protein 160 
ZNF184                0.172   zinc finger protein 184 
ZNF132                0.172   zinc finger protein 132 
ZNF135                0.171   zinc finger protein 135 
LOC100292052          0.171   PREDICTED: similar to hCG1773661 
LOC100287226          0.171   PREDICTED: similar to hCG1773661 
LOC100287226          0.171   PREDICTED: hypothetical protein XP_002343677 
ZNF347                0.169   zinc finger protein 347 
ZNF16                 0.168   zinc finger protein 16 
ZNF16                 0.168   zinc finger protein 16 
ZNF429                0.168   zinc finger protein 429 
ZNF629                0.168   zinc finger protein 629 
ZNF85                 0.167   zinc finger protein 85 
ZNF658                0.166   zinc finger protein 658 
ZNF418                0.166   zinc finger protein 418 
ZNF726                0.165   PREDICTED: zinc finger protein 726 
ZNF726                0.165   PREDICTED: zinc finger protein 726 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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