Search of human proteins with 113420756

Search of human proteins with 113420756

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113420756 PREDICTED: hypothetical protein [Homo sapiens]
         (117 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113420756 PREDICTED: hypothetical protein [Homo sapiens]           246   2e-66
gi|169217624 PREDICTED: hypothetical protein isoform 1 [Homo sap...    48   2e-06
gi|169217622 PREDICTED: hypothetical protein isoform 2 [Homo sap...    48   2e-06
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          32   0.11 
gi|239757909 PREDICTED: hypothetical protein [Homo sapiens]            30   0.53 
gi|239752421 PREDICTED: hypothetical protein [Homo sapiens]            30   0.53 
gi|239746936 PREDICTED: hypothetical protein [Homo sapiens]            30   0.53 
gi|239749706 PREDICTED: hypothetical protein XP_002347125 [Homo ...    29   0.70 
gi|156564367 hypothetical protein LOC113802 [Homo sapiens]             29   0.70 
gi|156564365 hypothetical protein LOC113802 [Homo sapiens]             29   0.70 
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 29   0.70 
gi|46409646 hypothetical protein LOC401563 [Homo sapiens]              29   0.70 
gi|169201741 PREDICTED: hypothetical protein [Homo sapiens]            28   1.2  
gi|169201345 PREDICTED: hypothetical protein [Homo sapiens]            28   1.2  
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ...    28   1.2  
gi|169188544 PREDICTED: hypothetical protein [Homo sapiens]            28   1.2  
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ...    28   1.2  
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r...    28   1.6  
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                28   1.6  
gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting ...    28   2.0  
gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting ...    28   2.0  
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho...    28   2.0  
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho...    28   2.0  
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho...    28   2.0  
gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]            28   2.0  
gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]            28   2.0  
gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo ...    28   2.0  
gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo ...    28   2.0  
gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo ...    28   2.0  
gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo ...    28   2.0  

>gi|113420756 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 117

 Score =  246 bits (629), Expect = 2e-66
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MNTIAWESGEREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEED 60
           MNTIAWESGEREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEED
Sbjct: 1   MNTIAWESGEREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEED 60

Query: 61  LGFCWGAGAVNREQRRGAVGKHGDKRRKEGGSGKPKAYGTAITRRNPIQVLNSPDPA 117
           LGFCWGAGAVNREQRRGAVGKHGDKRRKEGGSGKPKAYGTAITRRNPIQVLNSPDPA
Sbjct: 61  LGFCWGAGAVNREQRRGAVGKHGDKRRKEGGSGKPKAYGTAITRRNPIQVLNSPDPA 117


>gi|169217624 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 186

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 8   SGEREDTRDLREPAPAPS------GLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEE 59
           SGEREDT + R+PAPAPS        +      VGL    RGGML PGG A AD  EE
Sbjct: 117 SGEREDTPEGRKPAPAPSRSTTCCSALAGAGLLVGLQPGKRGGMLPPGGIAAADPHEE 174


>gi|169217622 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 186

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 8   SGEREDTRDLREPAPAPS------GLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEE 59
           SGEREDT + R+PAPAPS        +      VGL    RGGML PGG A AD  EE
Sbjct: 117 SGEREDTPEGRKPAPAPSRSTTCCSALAGAGLLVGLQPGKRGGMLPPGGIAAADPHEE 174


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 9    GEREDTRDLREPAPAPSGLVPSRPGWVGLP-RVGRGGMLLPGG--AAVADLQEEDLGFCW 65
            G++ D  +   P P   G+ P  PG  GLP   G  G + P G      D ++   G   
Sbjct: 1400 GDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPG 1459

Query: 66   GAGAVNREQRRGAVGKHGDKRRKEGGSGKPKAYGTA 101
              G+   +  RG  G  G K    G  G P   G A
Sbjct: 1460 QPGSPGEQGPRGPPGAIGPK----GDRGFPGPLGEA 1491


>gi|239757909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 127

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 2/93 (2%)

Query: 2   NTIAWESGERED--TRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEE 59
           + + W+SGE E    R L       +G      G     ++  GG  L      + LQ E
Sbjct: 17  DVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELSREGGGSPLQSE 76

Query: 60  DLGFCWGAGAVNREQRRGAVGKHGDKRRKEGGS 92
             G     GA+  EQR+   G+  ++R   GGS
Sbjct: 77  AQGRRQEPGALFLEQRQALRGRGQERRGHRGGS 109


>gi|239752421 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 127

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 2/93 (2%)

Query: 2   NTIAWESGERED--TRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEE 59
           + + W+SGE E    R L       +G      G     ++  GG  L      + LQ E
Sbjct: 17  DVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELAREGGGSPLQSE 76

Query: 60  DLGFCWGAGAVNREQRRGAVGKHGDKRRKEGGS 92
             G     GA+  EQR+   G+  ++R   GGS
Sbjct: 77  AQGRQQEPGALFLEQRQALRGRGQERRGHRGGS 109


>gi|239746936 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 127

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 2/93 (2%)

Query: 2   NTIAWESGERED--TRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEE 59
           + + W+SGE E    R L       +G      G     ++  GG  L      + LQ E
Sbjct: 17  DVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELAREGGGSPLQSE 76

Query: 60  DLGFCWGAGAVNREQRRGAVGKHGDKRRKEGGS 92
             G     GA+  EQR+   G+  ++R   GGS
Sbjct: 77  AQGRQQEPGALFLEQRQALRGRGQERRGHRGGS 109


>gi|239749706 PREDICTED: hypothetical protein XP_002347125 [Homo
           sapiens]
          Length = 215

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 15/88 (17%)

Query: 16  DLREPAPAPSGLVPSRPGWVGLPRVGRGGML-LPGGAAVADLQEEDLGFC--WGAGAVNR 72
           DL+EP P      PS P  + L   G+GG           +L     GFC   G      
Sbjct: 137 DLKEPPP------PSAPSLL-LEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLS 189

Query: 73  EQRRGAVGKHGDKRRKEGGSGKPKAYGT 100
           E+R+G      + +RK GG G P ++ T
Sbjct: 190 EERKGH-----ESKRKSGGRGSPSSHPT 212


>gi|156564367 hypothetical protein LOC113802 [Homo sapiens]
          Length = 393

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 74  QRRGAVGKHGDKRRKEGGSGKP-KAYGTAITRRNPIQVLNSPDP 116
           +R+   G+ GDK +  GGS  P   +G   T     ++ NSP P
Sbjct: 289 RRKEQAGERGDKPKDIGGSKAPVPCFGPVFTEVEKAKIENSPTP 332


>gi|156564365 hypothetical protein LOC113802 [Homo sapiens]
          Length = 393

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 74  QRRGAVGKHGDKRRKEGGSGKP-KAYGTAITRRNPIQVLNSPDP 116
           +R+   G+ GDK +  GGS  P   +G   T     ++ NSP P
Sbjct: 289 RRKEQAGERGDKPKDIGGSKAPVPCFGPVFTEVEKAKIENSPTP 332


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 15/32 (46%), Positives = 17/32 (53%)

Query: 18  REPAPAPSGLVPSRPGWVGLPRVGRGGMLLPG 49
           R P PAP G+ P RPG +  P V   G   PG
Sbjct: 490 RLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPG 521


>gi|46409646 hypothetical protein LOC401563 [Homo sapiens]
          Length = 190

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 15/88 (17%)

Query: 16  DLREPAPAPSGLVPSRPGWVGLPRVGRGGML-LPGGAAVADLQEEDLGFC--WGAGAVNR 72
           DL+EP P      PS P  + L   G+GG           +L     GFC   G      
Sbjct: 112 DLKEPPP------PSAPSLL-LEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLS 164

Query: 73  EQRRGAVGKHGDKRRKEGGSGKPKAYGT 100
           E+R+G      + +RK GG G P ++ T
Sbjct: 165 EERKGH-----ESKRKSGGRGSPSSHPT 187


>gi|169201741 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 5   AWESG----EREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRG-GMLLPGGAAVADLQEE 59
           AW  G     + DT   R  +P P        G + LPR   G G  L   A  A L   
Sbjct: 21  AWAPGCTGIRKGDTNKARASSPPPRETRGGPGGALTLPRKPPGSGRWLGLAAGTATLPSS 80

Query: 60  DLGFCWGAGAVN-REQRRGAVGKHGDKRRKEGGSGKPKAYGTA 101
               C G  A   R QR GA+   G +    GG G   A G++
Sbjct: 81  ---LCPGVQASRERGQRPGAIPAAGSRGEPAGGRGCCTAEGSS 120


>gi|169201345 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 5   AWESG----EREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRG-GMLLPGGAAVADLQEE 59
           AW  G     + DT   R  +P P        G + LPR   G G  L   A  A L   
Sbjct: 21  AWAPGCTGIRKGDTNKARASSPPPRETRGGPGGALTLPRKPPGSGRWLGLAAGTATLPSS 80

Query: 60  DLGFCWGAGAVN-REQRRGAVGKHGDKRRKEGGSGKPKAYGTA 101
               C G  A   R QR GA+   G +    GG G   A G++
Sbjct: 81  ---LCPGVQASRERGQRPGAIPAAGSRGEPAGGRGCCTAEGSS 120


>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
           sapiens]
          Length = 400

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 18  REPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGF 63
           R+PAP P G   +R G  G  R  R    + G   VA+  E   G+
Sbjct: 275 RKPAPCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGW 320


>gi|169188544 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 5   AWESG----EREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRG-GMLLPGGAAVADLQEE 59
           AW  G     + DT   R  +P P        G + LPR   G G  L   A  A L   
Sbjct: 21  AWAPGCTGIRKGDTNKARASSPPPRETRGGPGGALTLPRKPPGSGRWLGLAAGTATLPSS 80

Query: 60  DLGFCWGAGAVN-REQRRGAVGKHGDKRRKEGGSGKPKAYGTA 101
               C G  A   R QR GA+   G +    GG G   A G++
Sbjct: 81  ---LCPGVQASRERGQRPGAIPAAGSRGEPAGGRGCCTAEGSS 120


>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
           sapiens]
          Length = 400

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 18  REPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGF 63
           R+PAP P G   +R G  G  R  R    + G   VA+  E   G+
Sbjct: 275 RKPAPCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGW 320


>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c1 [Homo sapiens]
          Length = 1105

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 7   ESGERED-TRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCW 65
           E  E+ED T+D+ +P P P+      P  V L +      +   G  VADL E+D     
Sbjct: 360 EEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPV--KGGTVADLDEQDEETVT 417

Query: 66  GAGAVNREQRRG 77
             G  + +  +G
Sbjct: 418 AGGKEDEDPAKG 429


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 30/104 (28%), Positives = 37/104 (35%), Gaps = 9/104 (8%)

Query: 7   ESGEREDTRDLREPAPAPSGLVPSRPGWVGLP----RVGRGGMLLPGGAAVADLQEEDLG 62
           + GE  +  +  E  P   G  P  PG  GLP      G  G   PGG         D G
Sbjct: 338 DRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQG 397

Query: 63  FCWGAGAVNREQRRGAVGKHG-----DKRRKEGGSGKPKAYGTA 101
               AG       RG  G HG       + + G +G+P   G A
Sbjct: 398 PSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVA 441


>gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 4 [Homo sapiens]
          Length = 588

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 7/80 (8%)

Query: 26  GLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAGAVNREQRRGAVGKHGDK 85
           G  PSR      PR GR G    GG   A       G     G   +++ RG  G  G +
Sbjct: 470 GAAPSRGRGAAPPR-GRAGYSQRGGPGSAR------GVRGARGGAQQQRGRGVRGARGGR 522

Query: 86  RRKEGGSGKPKAYGTAITRR 105
               GG  K   Y    ++R
Sbjct: 523 GGNVGGKRKADGYNQPDSKR 542


>gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 1 [Homo sapiens]
          Length = 623

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 7/80 (8%)

Query: 26  GLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAGAVNREQRRGAVGKHGDK 85
           G  PSR      PR GR G    GG   A       G     G   +++ RG  G  G +
Sbjct: 505 GAAPSRGRGAAPPR-GRAGYSQRGGPGSAR------GVRGARGGAQQQRGRGVRGARGGR 557

Query: 86  RRKEGGSGKPKAYGTAITRR 105
               GG  K   Y    ++R
Sbjct: 558 GGNVGGKRKADGYNQPDSKR 577


>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
            sapiens]
          Length = 1818

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 9    GEREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAG 68
            G++ +  D  +P P      P   G  G P  G  G   P GAA A+ ++ + G    AG
Sbjct: 1345 GDKGEDGDPGQPGP------PGPSGEAGPP--GPPGKRGPPGAAGAEGRQGEKGAKGEAG 1396

Query: 69   AVNREQRRGAVGKHG--DKRRKEGGSGKPKAYG 99
            A     + G VG  G   K   EG  G P   G
Sbjct: 1397 AEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVG 1429


>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
            sapiens]
          Length = 1767

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 9    GEREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAG 68
            G++ +  D  +P P      P   G  G P  G  G   P GAA A+ ++ + G    AG
Sbjct: 1294 GDKGEDGDPGQPGP------PGPSGEAGPP--GPPGKRGPPGAAGAEGRQGEKGAKGEAG 1345

Query: 69   AVNREQRRGAVGKHG--DKRRKEGGSGKPKAYG 99
            A     + G VG  G   K   EG  G P   G
Sbjct: 1346 AEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVG 1378


>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
            sapiens]
          Length = 1806

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 9    GEREDTRDLREPAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAG 68
            G++ +  D  +P P      P   G  G P  G  G   P GAA A+ ++ + G    AG
Sbjct: 1333 GDKGEDGDPGQPGP------PGPSGEAGPP--GPPGKRGPPGAAGAEGRQGEKGAKGEAG 1384

Query: 69   AVNREQRRGAVGKHG--DKRRKEGGSGKPKAYG 99
            A     + G VG  G   K   EG  G P   G
Sbjct: 1385 AEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVG 1417


>gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 576

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 66  GAGAVNREQRRGAVGKHGDKRRKEG---GSGKPKAYG-TAITRRN 106
           G GA   EQR GA    G +RR+ G    +G P   G +  TRRN
Sbjct: 258 GGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRN 302


>gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 397

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 11/85 (12%)

Query: 20  PAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAGAVNREQRRGAV 79
           P+P P   + S   W  L + GR G    GG      ++E     WG G      RRG  
Sbjct: 219 PSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPL-WGWG------RRG-- 269

Query: 80  GKHGDKRRKEGGSGKPKAYGTAITR 104
              G   R     G+P+  GT   R
Sbjct: 270 --EGAAARAAPPCGQPRELGTLAAR 292


>gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo
           sapiens]
          Length = 404

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 66  GAGAVNREQRRGAVGKHGDKRRKEG---GSGKPKAYG-TAITRRN 106
           G GA   EQR GA    G +RR+ G    +G P   G +  TRRN
Sbjct: 258 GGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRN 302


>gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo
           sapiens]
          Length = 397

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 11/85 (12%)

Query: 20  PAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAGAVNREQRRGAV 79
           P+P P   + S   W  L + GR G    GG      ++E     WG G      RRG  
Sbjct: 219 PSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPL-WGWG------RRG-- 269

Query: 80  GKHGDKRRKEGGSGKPKAYGTAITR 104
              G   R     G+P+  GT   R
Sbjct: 270 --EGAAARAAPPCGQPRELGTLAAR 292


>gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo
           sapiens]
          Length = 404

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 66  GAGAVNREQRRGAVGKHGDKRRKEG---GSGKPKAYG-TAITRRN 106
           G GA   EQR GA    G +RR+ G    +G P   G +  TRRN
Sbjct: 258 GGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRN 302


>gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo
           sapiens]
          Length = 397

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 11/85 (12%)

Query: 20  PAPAPSGLVPSRPGWVGLPRVGRGGMLLPGGAAVADLQEEDLGFCWGAGAVNREQRRGAV 79
           P+P P   + S   W  L + GR G    GG      ++E     WG G      RRG  
Sbjct: 219 PSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPL-WGWG------RRG-- 269

Query: 80  GKHGDKRRKEGGSGKPKAYGTAITR 104
              G   R     G+P+  GT   R
Sbjct: 270 --EGAAARAAPPCGQPRELGTLAAR 292


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.137    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,106,102
Number of Sequences: 37866
Number of extensions: 345557
Number of successful extensions: 977
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 944
Number of HSP's gapped (non-prelim): 94
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.