Guide to the Human Genome
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Name: C1orf59 Sequence: fasta or formatted (393aa) NCBI GI: 156564365
Description:

hypothetical protein LOC113802

Not currently referenced in the text

Other entries for this name:
alt mRNA {393aa} hypothetical protein LOC113802
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         18           1
 C cysteine            2.3          9           1
 D aspartate           6.1         24           1
 E glutamate           8.1         32           2
 F phenylalanine       6.4         25           2
 G glycine             6.1         24           2
 H histidine           1.8          7           1
 I isoleucine          3.8         15           1
 K lysine              5.1         20           2
 L leucine            10.2         40           2
 M methionine          1.3          5           2
 N asparagine          4.3         17           2
 P proline             6.4         25           2
 Q glutamine           4.1         16           2
 R arginine            5.9         23           2
 S serine              7.1         28           2
 T threonine           4.1         16           2
 V valine              8.7         34           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC113802 
C1orf59               1.000   hypothetical protein LOC113802 
SRM                   0.008   spermidine synthase 
METTL5                0.008   methyltransferase like 5 
ZNF638                0.006   zinc finger protein 638 
ZNF638                0.006   zinc finger protein 638 
ATG2B                 0.006   ATG2 autophagy related 2 homolog B 
LOC728701             0.005   PREDICTED: hypothetical protein 
CACHD1                0.005   cache domain containing 1 
PDCD11                0.005   programmed cell death 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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