BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapiens] (946 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi... 1924 0.0 gi|4504789 1D-myo-inositol-trisphosphate 3-kinase A [Homo sapiens] 423 e-118 gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens] 417 e-116 gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 56 1e-07 gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 56 1e-07 gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 52 3e-06 gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 8e-06 gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 49 2e-05 gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 49 2e-05 gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 49 2e-05 gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 49 2e-05 gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ... 48 5e-05 gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ... 48 5e-05 gi|239508959 PREDICTED: hypothetical protein [Homo sapiens] 48 5e-05 gi|91208420 bassoon protein [Homo sapiens] 47 6e-05 gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 45 2e-04 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 45 2e-04 gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 45 3e-04 gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 45 4e-04 gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 44 5e-04 gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 5e-04 gi|22726201 inositol polyphosphate multikinase [Homo sapiens] 44 7e-04 gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 44 7e-04 gi|18079216 CASK interacting protein 1 [Homo sapiens] 43 0.001 gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ... 43 0.001 gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ... 43 0.001 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 43 0.001 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 42 0.002 gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 42 0.002 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 42 0.002 >gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapiens] Length = 946 Score = 1924 bits (4984), Expect = 0.0 Identities = 946/946 (100%), Positives = 946/946 (100%) Query: 1 MAVYCYALNSLVIMNSANEMKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPP 60 MAVYCYALNSLVIMNSANEMKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPP Sbjct: 1 MAVYCYALNSLVIMNSANEMKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPP 60 Query: 61 AESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLS 120 AESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLS Sbjct: 61 AESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLS 120 Query: 121 PPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPF 180 PPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPF Sbjct: 121 PPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPF 180 Query: 181 RSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGR 240 RSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGR Sbjct: 181 RSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGR 240 Query: 241 AAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASL 300 AAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASL Sbjct: 241 AAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASL 300 Query: 301 TMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPER 360 TMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPER Sbjct: 301 TMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPER 360 Query: 361 GGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALAS 420 GGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALAS Sbjct: 361 GGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALAS 420 Query: 421 VGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLEPLP 480 VGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLEPLP Sbjct: 421 VGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLEPLP 480 Query: 481 CWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTMEKAGLAWTRGTGVQSEGTWESQRQDSD 540 CWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTMEKAGLAWTRGTGVQSEGTWESQRQDSD Sbjct: 481 CWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTMEKAGLAWTRGTGVQSEGTWESQRQDSD 540 Query: 541 ALPSPELLPQDPDKPFLRKACSPSNIPAVIITDMGTQEDGALEETQGSPRGNLPLRKLSS 600 ALPSPELLPQDPDKPFLRKACSPSNIPAVIITDMGTQEDGALEETQGSPRGNLPLRKLSS Sbjct: 541 ALPSPELLPQDPDKPFLRKACSPSNIPAVIITDMGTQEDGALEETQGSPRGNLPLRKLSS 600 Query: 601 SSASSTGFSSSYEDSEEDISSDPERTLDPNSAFLHTLDQQKPRVSKSWRKIKNMVHWSPF 660 SSASSTGFSSSYEDSEEDISSDPERTLDPNSAFLHTLDQQKPRVSKSWRKIKNMVHWSPF Sbjct: 601 SSASSTGFSSSYEDSEEDISSDPERTLDPNSAFLHTLDQQKPRVSKSWRKIKNMVHWSPF 660 Query: 661 VMSFKKKYPWIQLAGHAGSFKAAANGRILKKHCESEQRCLDRLMVDVLRPFVPAYHGDVV 720 VMSFKKKYPWIQLAGHAGSFKAAANGRILKKHCESEQRCLDRLMVDVLRPFVPAYHGDVV Sbjct: 661 VMSFKKKYPWIQLAGHAGSFKAAANGRILKKHCESEQRCLDRLMVDVLRPFVPAYHGDVV 720 Query: 721 KDGERYNQMDDLLADFDSPCVMDCKMGIRTYLEEELTKARKKPSLRKDMYQKMIEVDPEA 780 KDGERYNQMDDLLADFDSPCVMDCKMGIRTYLEEELTKARKKPSLRKDMYQKMIEVDPEA Sbjct: 721 KDGERYNQMDDLLADFDSPCVMDCKMGIRTYLEEELTKARKKPSLRKDMYQKMIEVDPEA 780 Query: 781 PTEEEKAQRAVTKPRYMQWRETISSTATLGFRIEGIKKEDGTVNRDFKKTKTREQVTEAF 840 PTEEEKAQRAVTKPRYMQWRETISSTATLGFRIEGIKKEDGTVNRDFKKTKTREQVTEAF Sbjct: 781 PTEEEKAQRAVTKPRYMQWRETISSTATLGFRIEGIKKEDGTVNRDFKKTKTREQVTEAF 840 Query: 841 REFTKGNHNILIAYRDRLKAIRTTLEVSPFFKCHEVIGSSLLFIHDKKEQAKVWMIDFGK 900 REFTKGNHNILIAYRDRLKAIRTTLEVSPFFKCHEVIGSSLLFIHDKKEQAKVWMIDFGK Sbjct: 841 REFTKGNHNILIAYRDRLKAIRTTLEVSPFFKCHEVIGSSLLFIHDKKEQAKVWMIDFGK 900 Query: 901 TTPLPEGQTLQHDVPWQEGNREDGYLSGLNNLVDILTEMSQDAPLA 946 TTPLPEGQTLQHDVPWQEGNREDGYLSGLNNLVDILTEMSQDAPLA Sbjct: 901 TTPLPEGQTLQHDVPWQEGNREDGYLSGLNNLVDILTEMSQDAPLA 946 >gi|4504789 1D-myo-inositol-trisphosphate 3-kinase A [Homo sapiens] Length = 461 Score = 423 bits (1088), Expect = e-118 Identities = 227/399 (56%), Positives = 276/399 (69%), Gaps = 7/399 (1%) Query: 545 PELLPQDPDKPFLRKACSPSNIPAVIITDMGTQE-DGALEETQGSPRGNLPLRKLSSSSA 603 P LP+ P P + + + P V T G E + GS P R+LS+SS Sbjct: 67 PNGLPRAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDCLPAAGSSHLQQP-RRLSTSSV 125 Query: 604 SSTGFSSSYEDSEEDISSDPERTLDPNSAFLHTLDQQKPRVSKSWRKIKNMVHWSPFVMS 663 SSTG SS EDSE+D+ SD E N D + W+KI+ MV+ P + Sbjct: 126 SSTGSSSLLEDSEDDLLSDSESRSRGNVQLEAGEDVGQ---KNHWQKIRTMVNL-PVISP 181 Query: 664 FKKKYPWIQLAGHAGSFKAAA-NGRILKKHCESEQRCLDRLMVDVLRPFVPAYHGDVVKD 722 FKK+Y W+QLAGH GSFKAA +G ILK+ E E+ CL RLM D LR VPA+HG V +D Sbjct: 182 FKKRYAWVQLAGHTGSFKAAGTSGLILKRCSEPERYCLARLMADALRGCVPAFHGVVERD 241 Query: 723 GERYNQMDDLLADFDSPCVMDCKMGIRTYLEEELTKARKKPSLRKDMYQKMIEVDPEAPT 782 GE Y Q+ DLL FD PCV+DCKMG+RTYLEEELTKAR++P LRKDMY+KM+ VDPEAPT Sbjct: 242 GESYLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARERPKLRKDMYKKMLAVDPEAPT 301 Query: 783 EEEKAQRAVTKPRYMQWRETISSTATLGFRIEGIKKEDGTVNRDFKKTKTREQVTEAFRE 842 EEE AQRAVTKPRYMQWRE ISS+ TLGFRIEGIKK DG+ + DFK T++REQV F E Sbjct: 302 EEEHAQRAVTKPRYMQWREGISSSTTLGFRIEGIKKADGSCSTDFKTTRSREQVLRVFEE 361 Query: 843 FTKGNHNILIAYRDRLKAIRTTLEVSPFFKCHEVIGSSLLFIHDKKEQAKVWMIDFGKTT 902 F +G+ +L Y +RL+ IR TLEVS FF+ HEVIGSSLLF+HD +A VW+IDFGKTT Sbjct: 362 FVQGDEEVLRRYLNRLQQIRDTLEVSEFFRRHEVIGSSLLFVHDHCHRAGVWLIDFGKTT 421 Query: 903 PLPEGQTLQHDVPWQEGNREDGYLSGLNNLVDILTEMSQ 941 PLP+GQ L H PW+EGNREDGYL GL+NL+ IL +++ Sbjct: 422 PLPDGQILDHRRPWEEGNREDGYLLGLDNLIGILASLAE 460 >gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens] Length = 683 Score = 417 bits (1071), Expect = e-116 Identities = 219/432 (50%), Positives = 285/432 (65%), Gaps = 40/432 (9%) Query: 528 SEGTWESQRQD-SDALPSPELLPQDPDKPFLRKA--------------CSP-SNIPAVII 571 ++G+W D S P + L +P+ L + CSP +P +II Sbjct: 273 TDGSWTQPSTDGSQTAPGTDCLLGEPEDGPLEEPEPGELLTHLYSHLKCSPLCPVPRLII 332 Query: 572 TDMGTQEDGALEETQGSPRGNLPLRKLSSSSASSTGFSS--SYEDSEEDISSDPERTLDP 629 T + + P+ S S GFSS S+++SE+D+ + DP Sbjct: 333 TPETPEPEAQ------------PVGPPSRVEGGSGGFSSASSFDESEDDVVAGGGGASDP 380 Query: 630 NSAFLHTLDQQKPRVSKSWRKIKNMVHWSPFVMSFKKKYPWIQLAGHAGSFKAAANGRIL 689 SK W+K+K ++ +SPFV+SF+K YPW+QL+GHAG+F+A +GRIL Sbjct: 381 EDR----------SGSKPWKKLKTVLKYSPFVVSFRKHYPWVQLSGHAGNFQAGEDGRIL 430 Query: 690 KKHCESEQRCLDRLMVDVLRPFVPAYHGDVVKDGERYNQMDDLLADFDSPCVMDCKMGIR 749 K+ C+ EQR L++LM D LRPFVPAY+G V++DG+ +NQM+DLLADF+ P +MDCKMG R Sbjct: 431 KRFCQCEQRSLEQLMKDPLRPFVPAYYGMVLQDGQTFNQMEDLLADFEGPSIMDCKMGSR 490 Query: 750 TYLEEELTKARKKPSLRKDMYQKMIEVDPEAPTEEEKAQRAVTKPRYMQWRETISSTATL 809 TYLEEEL KAR++P RKDMY+KM+ VDP APT EE AQ AVTKPRYMQWRET+SST+TL Sbjct: 491 TYLEEELVKARERPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQWRETMSSTSTL 550 Query: 810 GFRIEGIKKEDGTVNRDFKKTKTREQVTEAFREFTKGNHNILIAYRDRLKAIRTTLEVSP 869 GFRIEGIKK DGT N +FKKT+ EQVT+ +F G+H IL Y L+ +R LE+SP Sbjct: 551 GFRIEGIKKADGTCNTNFKKTQALEQVTKVLEDFVDGDHVILQKYVACLEELREALEISP 610 Query: 870 FFKCHEVIGSSLLFIHDKKEQAKVWMIDFGKTTPLPEGQTLQHDVPWQEGNREDGYLSGL 929 FFK HEV+GSSLLF+HD AKVWMIDFGKT LP+ QTL H +PW EGNREDGYL GL Sbjct: 611 FFKTHEVVGSSLLFVHDHTGLAKVWMIDFGKTVALPDHQTLSHRLPWAEGNREDGYLWGL 670 Query: 930 NNLVDILTEMSQ 941 +N++ +L ++Q Sbjct: 671 DNMICLLQGLAQ 682 >gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo sapiens] Length = 1487 Score = 56.2 bits (134), Expect = 1e-07 Identities = 103/419 (24%), Positives = 138/419 (32%), Gaps = 59/419 (14%) Query: 17 ANEMKSGGGPGPSGSETPPPP------------RRAVLSPGSVFSPGRGASFLFPPAESL 64 A + G PGP G P P R A PG+ PG A + PP + Sbjct: 854 AGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG-AAGRVGPPGSNG 912 Query: 65 SPEEPRSPG-GWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPG 123 +P P PG + G + SG + + P+ +G+ +G PPG Sbjct: 913 NPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPG 972 Query: 124 PEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSS 183 P+ + I VG+ + + P S G+ +P R Sbjct: 973 PQGLAGQRGI-------------VGLPGQRGERGFPGLPGP-SGEPGKQGAPGASGDRGP 1018 Query: 184 SQPPGRVLVQGARSEERRTKSWGEQCP---ETSGTDSGRKGGPSLCSSQVKKGMPPLPGR 240 P G + G E R S G P + + G +G + G P PG Sbjct: 1019 PGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGP 1078 Query: 241 AAPTGSE-------AQGPSAFVRMEKGIPASPR-CGSPTAMEIDKRGSPTPGTRSC---- 288 A PTG + AQGP M PA R P DK + PG R Sbjct: 1079 AGPTGKQGDRGEAGAQGP-----MGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHR 1133 Query: 289 -LAPSLGLFGASLTMATEVAARVTS-TGPHRPQDLALTEPSGR--ARELEDLQPPEALVE 344 GL G + A+ +GP P PSG+ A + P Sbjct: 1134 GFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPP--GPVGPSGKDGANGIPGPIGPPGPRG 1191 Query: 345 RQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSA 403 R G ET PA G P PPG G G G G E G P + + Q+A Sbjct: 1192 RSG-----ETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRADQAA 1245 Score = 43.9 bits (102), Expect = 7e-04 Identities = 135/570 (23%), Positives = 177/570 (31%), Gaps = 132/570 (23%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFP--------------PAESLSPEEP 69 G PG +G PP P+ A PG+ PG +P ES SP E Sbjct: 258 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 317 Query: 70 RSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSP-------- 121 SPG G R L G + P+ A RG+ Q AG P Sbjct: 318 GSPGPM--GPRGLPGERGR---------TGPAGAAGARGNDGQPGPAGPPGPVGPAGGPG 366 Query: 122 -PGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCP- 179 PG AK + + + A P + + A+ + P Sbjct: 367 FPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG 426 Query: 180 ------FRSSSQPPGRVLVQGARSEERRTKS------WGEQCPETSGTDSGRKGGPSLCS 227 F PPG G + +T GEQ P+ +G +G P Sbjct: 427 IAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAG 486 Query: 228 SQVKKGMPPLPGRAAPTG--SEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGT 285 + K+G PG P G E P +G P P +G+P Sbjct: 487 EEGKRGARGEPGGVGPIGPPGERGAPG-----NRGFPGQDGLAGP-------KGAPGERG 534 Query: 286 RSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVER 345 S LA G G P RP + L G D P Sbjct: 535 PSGLAGPKGANG----------------DPGRPGEPGLPGARGLTGRPGDAGP------- 571 Query: 346 QGQFLGSETSPAPERGGPRDGEPPGKMGKGYLP--CGMPG----SGEP-EVGKRPEETTV 398 QG+ +G +P E G P PPG G P G PG +GEP + G++ Sbjct: 572 QGK-VGPSGAPG-EDGRP---GPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626 Query: 399 SVQSAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQL----SDRVEGGSP------ 448 ++ D + + P A E GAP G L EGG P Sbjct: 627 GLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVP 686 Query: 449 ----TLGLLG-----------GSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQC 493 GL+G GSP AQ G+ R L P D K P Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQ--------GLQGPRGLPGTPGTDGPKGASGPAG 738 Query: 494 PPGDRVGVQPGNSRVWQGTMEKAGLAWTRG 523 PPG + P + G AG+A +G Sbjct: 739 PPGAQ---GPPGLQGMPGERGAAGIAGPKG 765 Score = 43.1 bits (100), Expect = 0.001 Identities = 137/530 (25%), Positives = 175/530 (33%), Gaps = 109/530 (20%) Query: 17 ANEMKSGGGPGPSGSE---TPPPPRRAVLSPGSVFSPGRGAS--FLFPPAESLSPEEPRS 71 A E G PGPSG + PP P PG PG + + P E P E S Sbjct: 650 AGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS 709 Query: 72 PGG-WRSGRRRLNSSSGSGSGSSGSSVSSPSWA------------------GRLRGDRQQ 112 PG G R L + G+ S + P A +GDR Sbjct: 710 PGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGD 769 Query: 113 VVAAGTLSPPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRA 172 V G PG ++ R L N + G A S+ + R G Sbjct: 770 VGEKGPEGAPG-KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGER-GET 827 Query: 173 RSPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKK 232 P P F + PPG GA+ E+ ++G+KG Q Sbjct: 828 GPPGPAGF---AGPPGADGQPGAKGEQ---------------GEAGQKGDAGAPGPQGPS 869 Query: 233 GMPPLPGRAAPTGSE----AQGPSAFVRMEKGIP-ASPRCGSPTAMEIDKRGSPTPGTRS 287 G P G TG + AQGP G P A+ R G P + + PG Sbjct: 870 GAPGPQGPTGVTGPKGARGAQGPPG----ATGFPGAAGRVGPPGS-------NGNPGPPG 918 Query: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347 PS G G AR S P R + L P+G P E Sbjct: 919 PPGPS-GKDGPK-------GARGDSGPPGRAGEPGLQGPAG--------PPGEKGEPGDD 962 Query: 348 QFLGSETSPAPERGGPRDG--EPPGKMGKGYLPCGMPG-SGEPEVGKRPEETTVSVQSAE 404 G+E P P+ + G PG+ G+ P G+PG SGEP GK+ A Sbjct: 963 GPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFP-GLPGPSGEP--GKQ------GAPGAS 1013 Query: 405 SSDSLSWSRLPRALASVGPEEARSGAPVG-------GGRWQLSDRVEGGSPTLGLLG--- 454 P L E R G+P G DR E G+ +G G Sbjct: 1014 GDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGA--VGAPGAPG 1071 Query: 455 --GSPSAQPGTGNV----EAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDR 498 GSP TG EAG G M P A+ ++ PQ P GD+ Sbjct: 1072 PPGSPGPAGPTGKQGDRGEAG-AQGPMGPSGPA--GARGIQGPQGPRGDK 1118 Score = 42.4 bits (98), Expect = 0.002 Identities = 137/553 (24%), Positives = 182/553 (32%), Gaps = 95/553 (17%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 G PGP+G + P P G+ PG G + PP E +P PG + L Sbjct: 471 GEPGPAGPQGAPGPAGEEGKRGARGEPG-GVGPIGPPGERGAPGNRGFPG-----QDGLA 524 Query: 84 SSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQV 143 G+ S ++ P A GD G PG A R L + Sbjct: 525 GPKGAPGERGPSGLAGPKGAN---GD------PGRPGEPGLPGA----RGLTGRPGDAGP 571 Query: 144 NQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQP--------PGRVLVQGA 195 KVG A + P+ R P P ++ +P PG ++G Sbjct: 572 QGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGL 631 Query: 196 RSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTG-----SEAQG 250 ++ T + G P + G +G P Q G P PG G EA Sbjct: 632 PGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGA 691 Query: 251 PSAF-VRMEKGIPASPRCGSPTAMEID-KRGSP-TPGTRSCLAPSLGLFGASLTMATEVA 307 P R E+G P GSP A + RG P TPGT G GAS A Sbjct: 692 PGLVGPRGERGFPGER--GSPGAQGLQGPRGLPGTPGTD-------GPKGAS-----GPA 737 Query: 308 ARVTSTGPHRPQDL-------ALTEPSGRARELEDLQPPEALVERQGQFL-GSETSPAPE 359 + GP Q + + P G ++ + P A + G+ L G P P Sbjct: 738 GPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPA 797 Query: 360 RGGPRDGE--PPGKMGKGYL--------------PCGMPG----SGEPEV-GKRPEETTV 398 GE PPG G P G G G+P G++ E Sbjct: 798 GANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK 857 Query: 399 SVQSAESSDSLSWSRLPRALASV-GPEEAR--SGAPVGGGRWQLSDRV-----EGGSPTL 450 A S + P+ V GP+ AR G P G + RV G Sbjct: 858 GDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPP 917 Query: 451 GLLGGSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPGNSRVWQ 510 G G S P ++G P GR EP L+ P PPG++ + Sbjct: 918 GPPGPSGKDGPKGARGDSG-PPGRAGEP--------GLQGPAGPPGEKGEPGDDGPSGAE 968 Query: 511 GTMEKAGLAWTRG 523 G GLA RG Sbjct: 969 GPPGPQGLAGQRG 981 Score = 40.0 bits (92), Expect = 0.010 Identities = 123/516 (23%), Positives = 154/516 (29%), Gaps = 92/516 (17%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPG-RGASFLFPPAESLSPEEPRSPGG--WRSGRR 80 G GP G+ P P A PG PG RGA+ + P + P G + G R Sbjct: 726 GTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR 785 Query: 81 RLNSSSG----SGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQR 136 L G +G+ V P AG G R G PPGP Sbjct: 786 GLTGPIGPPGPAGANGEKGEVGPPGPAGSA-GARGAPGERGETGPPGPAG------FAGP 838 Query: 137 ELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPR-----LGRARSPSPCPFRSSSQPPGRVL 191 + Q K EA + + A P+ P G P R + PPG Sbjct: 839 PGADGQPGAKGEQGEAGQKGDAGA-PGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATG 897 Query: 192 VQGARSEERRTKSWGEQCPE----TSGTDS-----------GRKGGPSLCSSQVKKGMPP 236 GA S G P SG D GR G P L G Sbjct: 898 FPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG 957 Query: 237 LPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLF 296 PG P+G+E + ++GI P + +RG P S G Sbjct: 958 EPGDDGPSGAEGPPGPQGLAGQRGIVGLPG-------QRGERGFPGLPGPSGEPGKQGAP 1010 Query: 297 GASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSP 356 GAS GP P LT P+G G E SP Sbjct: 1011 GASGDRG--------PPGPVGPP--GLTGPAGEP--------------------GREGSP 1040 Query: 357 APERGGPRDGEPPGKMGKGYL----------PCGMPGSGEPEVGKRPEETTVSVQSAESS 406 + RDG K +G P G PG P GK+ + Q Sbjct: 1041 GADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGP-TGKQGDRGEAGAQGPMGP 1099 Query: 407 DSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNV 466 + +R GP+ R G + + G L L G P G Sbjct: 1100 SGPAGAR-----GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGAS 1154 Query: 467 EAGIPSGRMLEPLPCWDAAKD----LKEPQCPPGDR 498 PSG P P + KD + P PPG R Sbjct: 1155 GPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPR 1190 Score = 36.6 bits (83), Expect = 0.11 Identities = 116/531 (21%), Positives = 150/531 (28%), Gaps = 98/531 (18%) Query: 22 SGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRR 81 + G PGP G + P + ++ P PP P+ P G R R Sbjct: 96 ASGQPGPKGQKGEPGDIKDIVGPKG------------PPG----PQGPAGEQGPRGDRGD 139 Query: 82 LNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNV 141 G +P G G PPGP N Sbjct: 140 KGEKGAPGPRGRDGEPGTPGNPG----------PPGPPGPPGPPGLGG----------NF 179 Query: 142 QVNQKVGMFEAHIQAQSSAIQAPRSPR-----LGRARSPSPCPFRSSSQPPGRVLVQGAR 196 G E AQ +Q P P G A +P P F+ + PG V G Sbjct: 180 AAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPM 239 Query: 197 S---------------EERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPL---- 237 E + GE+ P G G P L + +G P L Sbjct: 240 GPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAK 299 Query: 238 -----PGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPS 292 PG +GS + S +G+P P + PG P Sbjct: 300 GEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPV 359 Query: 293 LGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQP--------PEALVE 344 G A TG P+ P G P + + Sbjct: 360 GPAGGPGFPGAPGAKGEAGPTGARGPE--GAQGPRGEPGTPGSPGPAGASGNPGTDGIPG 417 Query: 345 RQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPG-SGEP-------EVGKRPEET 396 +G + AP GPR PPG G P G G +GEP E G + E Sbjct: 418 AKGSAGAPGIAGAPGFPGPRG--PPGPQG-ATGPLGPKGQTGEPGIAGFKGEQGPKGEPG 474 Query: 397 TVSVQSAESSDSLSWSR----LPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGL 452 Q A R P + +GP R GAP G + D + G G Sbjct: 475 PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGER-GAP-GNRGFPGQDGLAGPKGAPGE 532 Query: 453 LGGSPSAQPGTGN------VEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGD 497 G S A P N E G+P R L P + P PG+ Sbjct: 533 RGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGE 583 >gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo sapiens] Length = 1418 Score = 56.2 bits (134), Expect = 1e-07 Identities = 103/419 (24%), Positives = 138/419 (32%), Gaps = 59/419 (14%) Query: 17 ANEMKSGGGPGPSGSETPPPP------------RRAVLSPGSVFSPGRGASFLFPPAESL 64 A + G PGP G P P R A PG+ PG A + PP + Sbjct: 785 AGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG-AAGRVGPPGSNG 843 Query: 65 SPEEPRSPG-GWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPG 123 +P P PG + G + SG + + P+ +G+ +G PPG Sbjct: 844 NPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPG 903 Query: 124 PEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSS 183 P+ + I VG+ + + P S G+ +P R Sbjct: 904 PQGLAGQRGI-------------VGLPGQRGERGFPGLPGP-SGEPGKQGAPGASGDRGP 949 Query: 184 SQPPGRVLVQGARSEERRTKSWGEQCP---ETSGTDSGRKGGPSLCSSQVKKGMPPLPGR 240 P G + G E R S G P + + G +G + G P PG Sbjct: 950 PGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGP 1009 Query: 241 AAPTGSE-------AQGPSAFVRMEKGIPASPR-CGSPTAMEIDKRGSPTPGTRSC---- 288 A PTG + AQGP M PA R P DK + PG R Sbjct: 1010 AGPTGKQGDRGEAGAQGP-----MGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHR 1064 Query: 289 -LAPSLGLFGASLTMATEVAARVTS-TGPHRPQDLALTEPSGR--ARELEDLQPPEALVE 344 GL G + A+ +GP P PSG+ A + P Sbjct: 1065 GFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPP--GPVGPSGKDGANGIPGPIGPPGPRG 1122 Query: 345 RQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSA 403 R G ET PA G P PPG G G G G E G P + + Q+A Sbjct: 1123 RSG-----ETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRADQAA 1176 Score = 43.9 bits (102), Expect = 7e-04 Identities = 135/570 (23%), Positives = 177/570 (31%), Gaps = 132/570 (23%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFP--------------PAESLSPEEP 69 G PG +G PP P+ A PG+ PG +P ES SP E Sbjct: 189 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 248 Query: 70 RSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSP-------- 121 SPG G R L G + P+ A RG+ Q AG P Sbjct: 249 GSPGPM--GPRGLPGERGR---------TGPAGAAGARGNDGQPGPAGPPGPVGPAGGPG 297 Query: 122 -PGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCP- 179 PG AK + + + A P + + A+ + P Sbjct: 298 FPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG 357 Query: 180 ------FRSSSQPPGRVLVQGARSEERRTKS------WGEQCPETSGTDSGRKGGPSLCS 227 F PPG G + +T GEQ P+ +G +G P Sbjct: 358 IAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAG 417 Query: 228 SQVKKGMPPLPGRAAPTG--SEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGT 285 + K+G PG P G E P +G P P +G+P Sbjct: 418 EEGKRGARGEPGGVGPIGPPGERGAPG-----NRGFPGQDGLAGP-------KGAPGERG 465 Query: 286 RSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVER 345 S LA G G P RP + L G D P Sbjct: 466 PSGLAGPKGANG----------------DPGRPGEPGLPGARGLTGRPGDAGP------- 502 Query: 346 QGQFLGSETSPAPERGGPRDGEPPGKMGKGYLP--CGMPG----SGEP-EVGKRPEETTV 398 QG+ +G +P E G P PPG G P G PG +GEP + G++ Sbjct: 503 QGK-VGPSGAPG-EDGRP---GPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 557 Query: 399 SVQSAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQL----SDRVEGGSP------ 448 ++ D + + P A E GAP G L EGG P Sbjct: 558 GLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVP 617 Query: 449 ----TLGLLG-----------GSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQC 493 GL+G GSP AQ G+ R L P D K P Sbjct: 618 GEAGAPGLVGPRGERGFPGERGSPGAQ--------GLQGPRGLPGTPGTDGPKGASGPAG 669 Query: 494 PPGDRVGVQPGNSRVWQGTMEKAGLAWTRG 523 PPG + P + G AG+A +G Sbjct: 670 PPGAQ---GPPGLQGMPGERGAAGIAGPKG 696 Score = 43.1 bits (100), Expect = 0.001 Identities = 137/530 (25%), Positives = 175/530 (33%), Gaps = 109/530 (20%) Query: 17 ANEMKSGGGPGPSGSE---TPPPPRRAVLSPGSVFSPGRGAS--FLFPPAESLSPEEPRS 71 A E G PGPSG + PP P PG PG + + P E P E S Sbjct: 581 AGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS 640 Query: 72 PGG-WRSGRRRLNSSSGSGSGSSGSSVSSPSWA------------------GRLRGDRQQ 112 PG G R L + G+ S + P A +GDR Sbjct: 641 PGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGD 700 Query: 113 VVAAGTLSPPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRA 172 V G PG ++ R L N + G A S+ + R G Sbjct: 701 VGEKGPEGAPG-KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGER-GET 758 Query: 173 RSPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKK 232 P P F + PPG GA+ E+ ++G+KG Q Sbjct: 759 GPPGPAGF---AGPPGADGQPGAKGEQ---------------GEAGQKGDAGAPGPQGPS 800 Query: 233 GMPPLPGRAAPTGSE----AQGPSAFVRMEKGIP-ASPRCGSPTAMEIDKRGSPTPGTRS 287 G P G TG + AQGP G P A+ R G P + + PG Sbjct: 801 GAPGPQGPTGVTGPKGARGAQGPPG----ATGFPGAAGRVGPPGS-------NGNPGPPG 849 Query: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347 PS G G AR S P R + L P+G P E Sbjct: 850 PPGPS-GKDGPK-------GARGDSGPPGRAGEPGLQGPAG--------PPGEKGEPGDD 893 Query: 348 QFLGSETSPAPERGGPRDG--EPPGKMGKGYLPCGMPG-SGEPEVGKRPEETTVSVQSAE 404 G+E P P+ + G PG+ G+ P G+PG SGEP GK+ A Sbjct: 894 GPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFP-GLPGPSGEP--GKQ------GAPGAS 944 Query: 405 SSDSLSWSRLPRALASVGPEEARSGAPVG-------GGRWQLSDRVEGGSPTLGLLG--- 454 P L E R G+P G DR E G+ +G G Sbjct: 945 GDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGA--VGAPGAPG 1002 Query: 455 --GSPSAQPGTGNV----EAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDR 498 GSP TG EAG G M P A+ ++ PQ P GD+ Sbjct: 1003 PPGSPGPAGPTGKQGDRGEAG-AQGPMGPSGPA--GARGIQGPQGPRGDK 1049 Score = 42.4 bits (98), Expect = 0.002 Identities = 137/553 (24%), Positives = 182/553 (32%), Gaps = 95/553 (17%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 G PGP+G + P P G+ PG G + PP E +P PG + L Sbjct: 402 GEPGPAGPQGAPGPAGEEGKRGARGEPG-GVGPIGPPGERGAPGNRGFPG-----QDGLA 455 Query: 84 SSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQV 143 G+ S ++ P A GD G PG A R L + Sbjct: 456 GPKGAPGERGPSGLAGPKGAN---GD------PGRPGEPGLPGA----RGLTGRPGDAGP 502 Query: 144 NQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQP--------PGRVLVQGA 195 KVG A + P+ R P P ++ +P PG ++G Sbjct: 503 QGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGL 562 Query: 196 RSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTG-----SEAQG 250 ++ T + G P + G +G P Q G P PG G EA Sbjct: 563 PGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGA 622 Query: 251 PSAF-VRMEKGIPASPRCGSPTAMEID-KRGSP-TPGTRSCLAPSLGLFGASLTMATEVA 307 P R E+G P GSP A + RG P TPGT G GAS A Sbjct: 623 PGLVGPRGERGFPGER--GSPGAQGLQGPRGLPGTPGTD-------GPKGAS-----GPA 668 Query: 308 ARVTSTGPHRPQDL-------ALTEPSGRARELEDLQPPEALVERQGQFL-GSETSPAPE 359 + GP Q + + P G ++ + P A + G+ L G P P Sbjct: 669 GPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPA 728 Query: 360 RGGPRDGE--PPGKMGKGYL--------------PCGMPG----SGEPEV-GKRPEETTV 398 GE PPG G P G G G+P G++ E Sbjct: 729 GANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK 788 Query: 399 SVQSAESSDSLSWSRLPRALASV-GPEEAR--SGAPVGGGRWQLSDRV-----EGGSPTL 450 A S + P+ V GP+ AR G P G + RV G Sbjct: 789 GDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPP 848 Query: 451 GLLGGSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPGNSRVWQ 510 G G S P ++G P GR EP L+ P PPG++ + Sbjct: 849 GPPGPSGKDGPKGARGDSG-PPGRAGEP--------GLQGPAGPPGEKGEPGDDGPSGAE 899 Query: 511 GTMEKAGLAWTRG 523 G GLA RG Sbjct: 900 GPPGPQGLAGQRG 912 Score = 40.0 bits (92), Expect = 0.010 Identities = 123/516 (23%), Positives = 154/516 (29%), Gaps = 92/516 (17%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPG-RGASFLFPPAESLSPEEPRSPGG--WRSGRR 80 G GP G+ P P A PG PG RGA+ + P + P G + G R Sbjct: 657 GTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR 716 Query: 81 RLNSSSG----SGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQR 136 L G +G+ V P AG G R G PPGP Sbjct: 717 GLTGPIGPPGPAGANGEKGEVGPPGPAGSA-GARGAPGERGETGPPGPAG------FAGP 769 Query: 137 ELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPR-----LGRARSPSPCPFRSSSQPPGRVL 191 + Q K EA + + A P+ P G P R + PPG Sbjct: 770 PGADGQPGAKGEQGEAGQKGDAGA-PGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATG 828 Query: 192 VQGARSEERRTKSWGEQCPE----TSGTDS-----------GRKGGPSLCSSQVKKGMPP 236 GA S G P SG D GR G P L G Sbjct: 829 FPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG 888 Query: 237 LPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLF 296 PG P+G+E + ++GI P + +RG P S G Sbjct: 889 EPGDDGPSGAEGPPGPQGLAGQRGIVGLPG-------QRGERGFPGLPGPSGEPGKQGAP 941 Query: 297 GASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSP 356 GAS GP P LT P+G G E SP Sbjct: 942 GASGDRG--------PPGPVGPP--GLTGPAGEP--------------------GREGSP 971 Query: 357 APERGGPRDGEPPGKMGKGYL----------PCGMPGSGEPEVGKRPEETTVSVQSAESS 406 + RDG K +G P G PG P GK+ + Q Sbjct: 972 GADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGP-TGKQGDRGEAGAQGPMGP 1030 Query: 407 DSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNV 466 + +R GP+ R G + + G L L G P G Sbjct: 1031 SGPAGAR-----GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGAS 1085 Query: 467 EAGIPSGRMLEPLPCWDAAKD----LKEPQCPPGDR 498 PSG P P + KD + P PPG R Sbjct: 1086 GPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPR 1121 Score = 34.7 bits (78), Expect = 0.43 Identities = 115/527 (21%), Positives = 148/527 (28%), Gaps = 98/527 (18%) Query: 26 PGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLNSS 85 PGP G + P + ++ P PP P+ P G R R Sbjct: 31 PGPKGQKGEPGDIKDIVGPKG------------PPG----PQGPAGEQGPRGDRGDKGEK 74 Query: 86 SGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQVNQ 145 G +P G G PPGP N Sbjct: 75 GAPGPRGRDGEPGTPGNPG----------PPGPPGPPGPPGLGG----------NFAAQM 114 Query: 146 KVGMFEAHIQAQSSAIQAPRSPR-----LGRARSPSPCPFRSSSQPPGRVLVQGARS--- 197 G E AQ +Q P P G A +P P F+ + PG V G Sbjct: 115 AGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRG 174 Query: 198 ------------EERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPL-------- 237 E + GE+ P G G P L + +G P L Sbjct: 175 PPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAG 234 Query: 238 -PGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLF 296 PG +GS + S +G+P P + PG P Sbjct: 235 APGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAG 294 Query: 297 GASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQP--------PEALVERQGQ 348 G A TG P+ P G P + + +G Sbjct: 295 GPGFPGAPGAKGEAGPTGARGPE--GAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGS 352 Query: 349 FLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPG-SGEP-------EVGKRPEETTVSV 400 + AP GPR PPG G P G G +GEP E G + E Sbjct: 353 AGAPGIAGAPGFPGPRG--PPGPQG-ATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGP 409 Query: 401 QSAESSDSLSWSR----LPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGS 456 Q A R P + +GP R GAP G + D + G G G S Sbjct: 410 QGAPGPAGEEGKRGARGEPGGVGPIGPPGER-GAP-GNRGFPGQDGLAGPKGAPGERGPS 467 Query: 457 PSAQPGTGN------VEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGD 497 A P N E G+P R L P + P PG+ Sbjct: 468 GLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGE 514 >gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] Length = 841 Score = 52.0 bits (123), Expect = 3e-06 Identities = 111/448 (24%), Positives = 154/448 (34%), Gaps = 103/448 (22%) Query: 5 CYALNSLVIMNSANEMKSGGGPGPSGSETPPP-PRRAVLSPGSVFSPGRGASFLFPPAES 63 C+++ S+ + SGG S + PP PRR + S+ PG GA PP++ Sbjct: 85 CHSVGSMDSVGGGPGGASGGLTEDSSTRRPPAKPRRHPSTKLSMVGPGSGAET--PPSKK 142 Query: 64 LSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPG 123 ++P +P G S R+ P R + Q V+ PPG Sbjct: 143 AGSQKP-TPEGRESSRK------------------VPPQKPRRSPNTQLSVSFDESCPPG 183 Query: 124 PEEAKRKLRILQRELQNVQV--NQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFR 181 P L LQR + +V + VG E + + R G + P Sbjct: 184 PSPRGGNLP-LQRLTRGSRVAGDPDVGAQEEPVYIEMVGDVFRGGGRSGGGLAGPPLGGG 242 Query: 182 SSSQPPGRVLVQGARSEERRTKSWGEQC----PETSGTDSGRKGGPSLCSSQVKKGMPPL 237 + P G A S+ +++ E+ PE +G GR GP PPL Sbjct: 243 GPTPPAG------ADSDSEESEAIYEEMKYPLPEEAG--EGRANGP-----------PPL 283 Query: 238 PGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPT----------------------AMEI 275 + P A P A R +P S R G+PT A Sbjct: 284 TATSPPQQPHALPPHAHRRPASALP-SRRDGTPTKTTPCEIPPPFPNLLQHRPPLLAFPQ 342 Query: 276 DKRGSPTPGTRSCLAPSL--GLFGASLTMATEVAARVTSTGPHRPQ----DLALTEPSGR 329 K S TPG P L A T A +V AR T P P +L L PSGR Sbjct: 343 AKSASRTPGDGVSRLPVLCHSKEPAGSTPAPQVPARERETPPPPPPPPAANLLLLGPSGR 402 Query: 330 ARELEDLQPPEALVERQG--QFLGSETSPAPERGGPRDGEP-PGKMGKG----------- 375 AR PP+ + +G + S + P+ G P P + G Sbjct: 403 ARSHSTPLPPQGSGQPRGERELPNSHSMICPKAAGAPAAPPAPAALLPGPPKDKAVSYTM 462 Query: 376 -----------YLPCGMP-GSGEPEVGK 391 LP G P G+GEP+ K Sbjct: 463 VYSAVKVTTHSVLPAGPPLGAGEPKTEK 490 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 50.4 bits (119), Expect = 8e-06 Identities = 106/429 (24%), Positives = 154/429 (35%), Gaps = 54/429 (12%) Query: 26 PGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLNSS 85 P P G PPP+ A +P + +G L P+ +P P + G S Sbjct: 1157 PSPKGGLATPPPKGAPTTPAATPPSPKGG--LATPSPKGAPTTPAATPPSPKGGLATPSP 1214 Query: 86 SGS--------GSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRE 137 G+ S G + SP A G +PP P+ A Sbjct: 1215 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPP-PKGAPTPPAATPPS 1273 Query: 138 LQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSP---SPCPFR----SSSQPPGRV 190 L+ H A + A+ P SP+ G A SP +P P S PG Sbjct: 1274 LKGGLAT------PPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTP 1327 Query: 191 LVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQG 250 +GA + T + P T KGGP+ SS K+G P P A P S G Sbjct: 1328 PPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS--KEG--PTPPAATP--SHKGG 1381 Query: 251 PSAFVRMEKGIPASPR-CGSPTAMEI----DKRGSPTPGTRSCLA-PSLG-LFGASLTMA 303 P+ K PA P G PT+ + K+ TP TR A PS G L ++T Sbjct: 1382 PAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPV 1441 Query: 304 TEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPERGGP 363 + A TS P+ T S L + PP + + + +SP Sbjct: 1442 SLKKAPATSA----PKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSP------K 1491 Query: 364 RDGEPPGKMGKGYLPCGMPGS-----GEPEVGKRPEETTVSVQSAESSDSLS--WSRLPR 416 + P MG LP +P S P + P T ++ S ++ +L+ + +P Sbjct: 1492 KAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPP 1551 Query: 417 ALASVGPEE 425 A+ P++ Sbjct: 1552 AMTVPSPKK 1560 Score = 43.1 bits (100), Expect = 0.001 Identities = 109/501 (21%), Positives = 155/501 (30%), Gaps = 105/501 (20%) Query: 15 NSANEMKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSP-------- 66 NS + S P + S TPP P+ A +P +V +P PP E+ +P Sbjct: 839 NSLSFQGSKDSPATTHSPTPPSPKGAP-TPSAV-TPLSPKGVTLPPKETPTPSVVNLPFP 896 Query: 67 -EEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPE 125 E P +P ++ + SSS + ++ + P+ + +G A GP Sbjct: 897 KEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPA-SPSPKGAPTPPAATPPSPKGGPA 955 Query: 126 EAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRAR-SPSPCPFRSSS 184 K A + P SP+ G A SP P ++ Sbjct: 956 TPSPKW------------------------APTPPAATPPSPKGGPATPSPKGAPTPPAA 991 Query: 185 QPPGRVLVQGARSEERRTKSWGEQCPETSG-------TDSGRKGGPSLCSSQVKKGMPPL 237 PP + G P G T KG P+ PP Sbjct: 992 TPP--------------SPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPA 1037 Query: 238 PGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFG 297 +P GS A P + KG P +P P+ K G TP + P Sbjct: 1038 ATPPSPKGSPAATP-----LPKGAPTTPAATLPSP----KGGPATPSLKGAPTPP----- 1083 Query: 298 ASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPA 357 + T + T + P A T PS + PP G+ T+PA Sbjct: 1084 -AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT---PPHK---------GAPTTPA 1130 Query: 358 PERGGPRDG--EPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLP 415 P+ G PP K G P P S + + P + + +A Sbjct: 1131 ATPPSPKGGLATPPPK-GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG----- 1184 Query: 416 RALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRM 475 LA+ P+ GAP + SP GL SP P T P G + Sbjct: 1185 -GLATPSPK----GAPT-------TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGL 1232 Query: 476 LEPLPCWDAAKDLKEPQCPPG 496 P P P P G Sbjct: 1233 ATPSPKGAPTTPAATPPSPKG 1253 Score = 42.0 bits (97), Expect = 0.003 Identities = 102/484 (21%), Positives = 158/484 (32%), Gaps = 98/484 (20%) Query: 26 PGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLNSS 85 P P G PP+ A P + +G+ PP + +P P + + Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354 Query: 86 SGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQVNQ 145 S G ++ SS P+ + ++PP P+ Sbjct: 1355 SSKGGPTTPSSKEGPTPPAATPSHK----GGPAMTPPSPK-------------------- 1390 Query: 146 KVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEERRTKSW 205 + AI +P+ G SP+ P P V +GA T S Sbjct: 1391 -----------RGPAIPSPK----GDPTSPAVIPLSPKKAPATPVTREGA-----ATPSK 1430 Query: 206 GEQCP--------ETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQGPS--AFV 255 G+ P + + S KGGP+ SS KG P LP P+ E P A Sbjct: 1431 GDLTPPAVTPVSLKKAPATSAPKGGPATPSS---KGDPTLPAVTPPSPKEPPAPKQVATS 1487 Query: 256 RMEKGIPASPR-CGSPTAMEI----DKRGSPTPGTR----------------SCLAPSLG 294 K PA+P G+PT + K TP +R + LAP Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEA 1547 Query: 295 LFGASLTMAT-----------EVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEAL- 342 L ++T+ + E A +S P + + G E L PP Sbjct: 1548 LIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTS 1607 Query: 343 -VERQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQ 401 ++ + T P+PE+G P G P P S + + P T + Sbjct: 1608 PSPKEAPTPPAVTPPSPEKG----PATPAPKGTPTSPPVTPSSLK-DSPTSPASVTCKMG 1662 Query: 402 SA--ESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSA 459 + ++S L + P AL V A P+ + + + S T + PSA Sbjct: 1663 ATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSA 1722 Query: 460 QPGT 463 + G+ Sbjct: 1723 KNGS 1726 Score = 39.7 bits (91), Expect = 0.013 Identities = 96/465 (20%), Positives = 143/465 (30%), Gaps = 57/465 (12%) Query: 59 PPAESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSS------PSWAGRLRGDRQQ 112 P S+SP+ R P ++ ++ + G+ S VS P + +G + Sbjct: 796 PLGVSVSPQTKRPP------TKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDS 849 Query: 113 VVAAGTLSPPGPEEAKRKLRILQRELQNVQVNQKV----GMFEAHIQAQSSAIQAPRSPR 168 + +PP P+ A + + V + K + + A AP+ Sbjct: 850 PATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAP 909 Query: 169 LGRARSPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSS 228 S SP R++ P G + + S + G P + T KGGP+ S Sbjct: 910 ALSMTSSSPKKARATPAPKG---IPASPSPK------GAPTPPAA-TPPSPKGGPATPSP 959 Query: 229 Q----VKKGMPPLP--GRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPT 282 + PP P G A P+ A P A P SP+ G T +G+PT Sbjct: 960 KWAPTPPAATPPSPKGGPATPSPKGAPTPPA------ATPPSPKGGPATP---SPKGAPT 1010 Query: 283 PGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEAL 342 P + +P T P + A P G P Sbjct: 1011 PPAVTPPSPKGSPAATPFPKGASTPPAATPPSP-KGSPAATPLPKGAPTTPAATLPSPKG 1069 Query: 343 VERQGQFLGSETSPAPERGGPRDGEP-PGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQ 401 G+ T PA P+ G P G P P S + + P + + Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTP 1129 Query: 402 SAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTL----------G 451 +A P + A +P GG L+ G+PT G Sbjct: 1130 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGG----LATPPPKGAPTTPAATPPSPKGG 1185 Query: 452 LLGGSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPG 496 L SP P T P G + P P P P G Sbjct: 1186 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230 >gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] Length = 1464 Score = 49.3 bits (116), Expect = 2e-05 Identities = 122/504 (24%), Positives = 158/504 (31%), Gaps = 91/504 (18%) Query: 19 EMKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEE-----PRSPG 73 E + G PGP G P+ A SPG G + PP + +P + P P Sbjct: 732 ERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGP-IGPPGPAGAPGDKGESGPSGPA 790 Query: 74 GWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGR--LRGDRQQVVAAGTLSPPGPEEAKRKL 131 G R G P G+ +G+ A G PPGP Sbjct: 791 GPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP------- 843 Query: 132 RILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVL 191 + P P +G +P R S+ PPG Sbjct: 844 ---------------------------AGPAGPPGP-IGNVGAPGAKGARGSAGPPGATG 875 Query: 192 VQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQGP 251 GA G P +G++GG + + G PG P G GP Sbjct: 876 FPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK---GPRGETGPAGRPGEVGPPG--PPGP 930 Query: 252 SAFVRMEKGIPASPRCGSPTAMEIDKRGSP-TPGTRSCLAPSLGLFGASLTMATEVAARV 310 + EKG SP P G+P TPG + +A G+ G + + R Sbjct: 931 AG----EKG---SPGADGPA-------GAPGTPGPQG-IAGQRGVVG----LPGQRGERG 971 Query: 311 TSTGPHRPQDLALTEPSGRARELEDLQP--PEALVERQGQFLGSETSPAPERGGPRDGEP 368 P + PSG + E P P L G+ G E +P E RDG P Sbjct: 972 FPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE-SGREGAPGAEGSPGRDGSP 1030 Query: 369 PGKMGKGYL-PCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALASVGPEEAR 427 K +G P G PG+ P V A S + VGP AR Sbjct: 1031 GAKGDRGETGPAGPPGAPGAPGAPGP------VGPAGKSGDRGETGPAGPAGPVGPVGAR 1084 Query: 428 SGAPVGGGRWQLSDRVEGGSPTL-------GLLG--GSPSAQPGTGNVEAGIPSGRMLEP 478 A G R + E G + GL G G P + G A P+G P Sbjct: 1085 GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP 1144 Query: 479 ----LPCWDAAKDLKEPQCPPGDR 498 P D L P PPG R Sbjct: 1145 GSAGAPGKDGLNGLPGPIGPPGPR 1168 Score = 44.3 bits (103), Expect = 5e-04 Identities = 128/530 (24%), Positives = 166/530 (31%), Gaps = 108/530 (20%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPG----RGASFLFPPAESLSPEEPRSPGGWRSGR 79 G PG G PP P+ A PG+ PG RG S L P P+ G Sbjct: 236 GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGEN 295 Query: 80 RRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQ 139 G +P AG RG+ AAG P GP Sbjct: 296 GAPGQMGPRGLPGERGRPGAPGPAGA-RGNDGATGAAGPPGPTGPAGPPG---------- 344 Query: 140 NVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEE 199 F + A+ A P+ PR S P R PPG G Sbjct: 345 ----------FPGAVGAKGEA--GPQGPR----GSEGPQGVRGEPGPPGPAGAAGPAGNP 388 Query: 200 RRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEK 259 G + G G P + G P PG P+G + G + Sbjct: 389 GADGQPGAK---------GANGAPGIA------GAPGFPGARGPSGPQGPGGPPGPKGNS 433 Query: 260 GIPASPRCGSPT-----------------AMEIDKRGS-PTPGTRSCLAP--------SL 293 G P +P T A E KRG+ PG P S Sbjct: 434 GEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSR 493 Query: 294 GLFGASLTMATE-VAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGS 352 G GA + A S GP P+ P R P EA + GS Sbjct: 494 GFPGADGVAGPKGPAGERGSPGPAGPKG----SPGEAGR------PGEAGLPGAKGLTGS 543 Query: 353 ETSPAPE-RGGP-----RDGE-----PPGKMGKGYLPCGMPG----SGEP-EVGKRPEET 396 SP P+ + GP +DG PPG G+ + G PG +GEP + G+R Sbjct: 544 PGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGV-MGFPGPKGAAGEPGKAGERGVPG 602 Query: 397 TVSVQSAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGS 456 D + ++ P A E G P G +Q + G + G G Sbjct: 603 PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQG-PAGSPGFQ---GLPGPAGPPG-EAGK 657 Query: 457 PSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDR-VGVQPGN 505 P Q G++ A PSG E + + ++ P P G R PGN Sbjct: 658 PGEQGVPGDLGAPGPSGARGE--RGFPGERGVQGPPGPAGPRGANGAPGN 705 Score = 42.0 bits (97), Expect = 0.003 Identities = 76/288 (26%), Positives = 91/288 (31%), Gaps = 50/288 (17%) Query: 16 SANEMKSGGGPGPSGSETPPPP------RRAVLSPGSVFSPG----RG--ASFLFPPAES 63 S + + G PGP G + PP P R A PG PG RG S FP A+ Sbjct: 441 SKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADG 500 Query: 64 LSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPG 123 ++ P+ P G R G P G L G G PPG Sbjct: 501 VA--GPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKG-LTGSPGSPGPDGKTGPPG 557 Query: 124 PEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSS 183 P + G A QA P+ G A P R Sbjct: 558 PAGQDGR-------------PGPPGPPGARGQAGVMGFPGPK----GAAGEPGKAGERGV 600 Query: 184 SQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAP 243 PPG V G E G Q P +G +G S G LPG A P Sbjct: 601 PGPPGAVGPAGKDGEA------GAQGPPGPAGPAGERGEQGPAGS---PGFQGLPGPAGP 651 Query: 244 TGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAP 291 G EA P E+G+P P+ +RG PG R P Sbjct: 652 PG-EAGKPG-----EQGVPGDLGAPGPSGAR-GERG--FPGERGVQGP 690 Score = 41.2 bits (95), Expect = 0.005 Identities = 66/284 (23%), Positives = 90/284 (31%), Gaps = 27/284 (9%) Query: 17 ANEMKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWR 76 A E S G GP+G+ P P+ G V PG+ FP S E + Sbjct: 931 AGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGA 990 Query: 77 SGRRRLNSSSG----------SGSGSSGSSVSSPSWAGR--LRGDRQQVVAAGTLSPPGP 124 SG R G SG + + SP G +GDR + AG PG Sbjct: 991 SGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGA 1050 Query: 125 EEAKRKLRILQRELQNVQVNQ-----KVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCP 179 A + + + VG A A P+ PR + + Sbjct: 1051 PGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPA------GPQGPRGDKGETGE--- 1101 Query: 180 FRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPG 239 + G G + S GEQ P + +G +G P + K G+ LPG Sbjct: 1102 -QGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPG 1160 Query: 240 RAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTP 283 P G + A G P P P + D P P Sbjct: 1161 PIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFLPQP 1204 Score = 40.8 bits (94), Expect = 0.006 Identities = 124/503 (24%), Positives = 154/503 (30%), Gaps = 87/503 (17%) Query: 22 SGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPE----EPRSPGGWRS 77 + G PGP+G PP AV + G G P S P+ EP PG + Sbjct: 330 AAGPPGPTGPAGPPGFPGAVGAKGEAGPQG--------PRGSEGPQGVRGEPGPPGPAGA 381 Query: 78 GRRRLNSSSGSGSGSSGSSVSSPSWAGR--LRGDRQQVVAAGTLSPPGPEEAKRKLRILQ 135 N + G+ G++ +P AG G R G PPGP+ Sbjct: 382 AGPAGNPGADGQPGAKGAN-GAPGIAGAPGFPGARGPSGPQGPGGPPGPK---------- 430 Query: 136 RELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPR-LGRARSPSPCPFRSSSQPPGRVLVQG 194 S AP S G P P + P G +G Sbjct: 431 --------------------GNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRG 470 Query: 195 ARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGS--EAQGP- 251 AR E T G G G + + G PG A P GS EA P Sbjct: 471 ARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPG 530 Query: 252 SAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASLTMATEVAARVT 311 A + KG+ SP P K G P P + G G A A + Sbjct: 531 EAGLPGAKGLTGSPGSPGPDG----KTGPPGPAGQDGRPGPPGPPG-----ARGQAGVMG 581 Query: 312 STGPHRPQDLALTEPSGRARELEDLQPPEAL------VERQGQFLGSETSPAPERGGPRD 365 GP A EP G+A E PP A+ E Q PA ERG Sbjct: 582 FPGPKG----AAGEP-GKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGP 636 Query: 366 GEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSR-LPRALASVGPE 424 PG G P G PG E GK E+ A R P GP Sbjct: 637 AGSPGFQGLPG-PAGPPG----EAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPP 691 Query: 425 EARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQ--PGTGNVEAGIP---------SG 473 G + + G+P G+P Q PG AG+P Sbjct: 692 GPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGA-AGLPGPKGDRGDAGP 750 Query: 474 RMLEPLPCWDAAKDLKEPQCPPG 496 + + P D + L P PPG Sbjct: 751 KGADGSPGKDGVRGLTGPIGPPG 773 >gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] Length = 2944 Score = 49.3 bits (116), Expect = 2e-05 Identities = 100/356 (28%), Positives = 127/356 (35%), Gaps = 73/356 (20%) Query: 191 LVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQG 250 L Q + + + R + CP+ + G G L G P LPGR G + Sbjct: 1233 LCQASFTTQPRPEPCPVYCPKGQKGEPGEMG---LRGQVGPPGDPGLPGRTGAPGPQGPP 1289 Query: 251 PSAFVRMEKGIP-ASPRCGSPTAMEIDKRGSP-TPGTRSCLAPSLGLFGASLTMATEVAA 308 SA + E+G P A R GSP + G+P TPG L S GL G Sbjct: 1290 GSATAKGERGFPGADGRPGSP-----GRAGNPGTPGAPG-LKGSPGLPGP--------RG 1335 Query: 309 RVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPER-GGPRDGE 367 GP P+ EP GQ +G E P R G P Sbjct: 1336 DPGERGPRGPKG----EPGA-----------------PGQVIGGEGPGLPGRKGDPGPSG 1374 Query: 368 PPGKMG-------KGYLPCGMPGSG-EPEVGKRPEETTVSVQSAESSDSLSWSRLPRALA 419 PPG G +G P G+PG+ + + G R E E + LP Sbjct: 1375 PPGPRGPLGDPGPRG--PPGLPGTAMKGDKGDRGERGPPG--PGEGGIAPGEPGLPGLPG 1430 Query: 420 SVGPEEARSGAPVG--GGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLE 477 S GP+ PVG G + + D E G+P L GSP Q G A P G Sbjct: 1431 SPGPQ-----GPVGPPGKKGEKGDS-EDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGF 1484 Query: 478 PLPCWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTMEKAGLAWTRG----TGVQSE 529 P P +A + K + PPG P SR G + G G TG Q E Sbjct: 1485 PGPLGEAGE--KGERGPPG------PAGSRGLPGVAGRPGAKGPEGPPGPTGRQGE 1532 Score = 43.1 bits (100), Expect = 0.001 Identities = 103/412 (25%), Positives = 138/412 (33%), Gaps = 66/412 (16%) Query: 187 PGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLC---SSQVKKGMPPLPGRAAP 243 PG+ +G R GE+ + + GR G P + + G P PGR Sbjct: 1651 PGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVD 1710 Query: 244 TGSEA-----------QGPSAFVRMEKGIPASPRCGSPTAMEIDK-RGSP----TPGTRS 287 TG A +GP R KG P P G+P I+ RG P PG R Sbjct: 1711 TGPGAREKGEPGDRGQEGP----RGPKGDPGLP--GAPGERGIEGFRGPPGPQGDPGVRG 1764 Query: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347 L + + + + GP + P+G A + D R Sbjct: 1765 PAGEKGDRGPPGLDGRSGLDGKPGAAGP--------SGPNGAAGKAGDPGRDGLPGLRGE 1816 Query: 348 QFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSD 407 Q L + P G P + PG GK P G PG E G++ E+ E D Sbjct: 1817 QGLPGPSGPPGLPGKPGEDGKPGLNGKNGEP-GDPG----EDGRKGEKGDSGASGREGRD 1871 Query: 408 SLSWSR-LPRALASVGPE----------EARSGAPVG----GGRWQLSDRVEGGSPTLGL 452 R P L GP + G P G G R + + E G P Sbjct: 1872 GPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERG 1931 Query: 453 LGGSPSAQPGTGNV--EAGIPSGRMLEPLPCWDAAKDLKEP-----QCPPGDRVGVQPGN 505 L G P + P + AGI + + E + WD + P + P GD P Sbjct: 1932 LRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPG 1991 Query: 506 SRVWQGTMEKAGLAWTRG-TGVQS-EGTWESQRQDSDALPSPELLPQDPDKP 555 G + GL RG G Q G +R P P L +P KP Sbjct: 1992 KEGPIGFPGERGLKGDRGDPGPQGPPGLALGER----GPPGPSGLAGEPGKP 2039 Score = 42.4 bits (98), Expect = 0.002 Identities = 115/479 (24%), Positives = 155/479 (32%), Gaps = 126/479 (26%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 G PGPSG PP PR + PG PG PG G + Sbjct: 1368 GDPGPSG---PPGPRGPLGDPGPRGPPGL-------------------PGTAMKGDKGDR 1405 Query: 84 SSSGS-GSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQ 142 G G G G + P G Q G + PPG + K Sbjct: 1406 GERGPPGPGEGGIAPGEPGLPGLPGSPGPQ----GPVGPPGKKGEKG------------- 1448 Query: 143 VNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEERRT 202 S AP P G+ SP + PPG + +G R Sbjct: 1449 ---------------DSEDGAPGLP--GQPGSPGE---QGPRGPPGAIGPKGDR------ 1482 Query: 203 KSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIP 262 G P + G +G P S +G+P + GR G E + EKG P Sbjct: 1483 ---GFPGPLGEAGEKGERGPPGPAGS---RGLPGVAGRPGAKGPEGPPGPTGRQGEKGEP 1536 Query: 263 ASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLA 322 P G P + G G + + P+ G GA+ G P L Sbjct: 1537 GRP--GDPAVVGPAVAG--PKGEKGDVGPA-GPRGATGVQ-----------GERGPPGLV 1580 Query: 323 LTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMP 382 L G + D + P L R G ++ P E+G P PPG +G P Sbjct: 1581 LPGDPGPKGDPGD-RGPIGLTGRAGP--PGDSGPPGEKGDPGRPGPPGPVG--------P 1629 Query: 383 GSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDR 442 + EVG++ +E L E GAP G R + ++ Sbjct: 1630 RGRDGEVGEKGDEGPPG---------------DPGLPGKAGERGLRGAP--GVRGPVGEK 1672 Query: 443 VEGGSPTLGLLGGSP-SAQPGTGNVEAGIPS--GRMLEPLPCWDAAKDLKEPQCPPGDR 498 + G P GSP S+ P E G P GR+++ P A++ E PGDR Sbjct: 1673 GDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGP---GAREKGE----PGDR 1724 Score = 42.0 bits (97), Expect = 0.003 Identities = 124/523 (23%), Positives = 166/523 (31%), Gaps = 92/523 (17%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 G G G + PP PG+ PG PP +S +EP G L Sbjct: 2067 GERGEQGRDGPPG------LPGTPGPPG-------PPGPKVSVDEPGPGLSGEQGPPGLK 2113 Query: 84 SSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQV 143 + G + ++GDR + G PG L E Sbjct: 2114 GAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPG----------LPGERGMAGP 2163 Query: 144 NQKVGMFEAHIQAQSSAIQAPRSP--RLGRARSPSPCPFRSSSQPPGRVLVQGARSEERR 201 K G +Q PR P +G P P + P G G + E Sbjct: 2164 EGKPG------------LQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGE 2211 Query: 202 TKSWGEQCPETSGTDS-----------GRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQG 250 T G +G G +G P L + G P PGR +G + Sbjct: 2212 TGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGD- 2270 Query: 251 PSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAP-SLGLFGASLTMATEVAAR 309 R G+P SP P + + + PG P + G GA +A ++ Sbjct: 2271 -----RGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGE 2325 Query: 310 VTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPE--RGGPRDGE 367 + G D L P G E P E G + +P P+ +G P G Sbjct: 2326 PGAKG-----DRGLPGPRGEKGEAGRAGEPGDPGED-----GQKGAPGPKGFKGDPGVGV 2375 Query: 368 P--PGKMG----KGYLPCGMPG-SGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALAS 420 P PG G KG L G+PG G P V P +T + + S R LA Sbjct: 2376 PGSPGPPGPPGVKGDL--GLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGE-----RGLAG 2428 Query: 421 VGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLEPLP 480 E G P+G S G S G G PG E G P R + P Sbjct: 2429 PPGREGIPG-PLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRG-ERGEPGIRGEDGRP 2486 Query: 481 CWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTMEKAGLAWTRG 523 + + L PPG R R +G + AGL +G Sbjct: 2487 GQEGPRGLTG---PPGSR------GERGEKGDVGSAGLKGDKG 2520 Score = 39.7 bits (91), Expect = 0.013 Identities = 96/397 (24%), Positives = 136/397 (34%), Gaps = 70/397 (17%) Query: 24 GGPGPSGSE--TPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRR- 80 G PGPSG PP R + PG + PG S + PP S + PG G R Sbjct: 2416 GQPGPSGERGLAGPPGREGI--PGPLGPPGPPGS-VGPPGASGLKGDKGDPGVGLPGPRG 2472 Query: 81 -----RLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAG----------TLSPPGPE 125 + G ++ P + RG++ V +AG L PPGP Sbjct: 2473 ERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPR 2532 Query: 126 EAK-----RKLRILQREL----QNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPS 176 AK R R L + N K E + S+ + R LG P Sbjct: 2533 GAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKG-SAGLPGLRG-LLGPQGQPG 2590 Query: 177 PCPFRSSSQPPGRVLVQGARSE--------------ERRTK-SWGEQCPETSGTDSGRKG 221 PG+ V G R E ER K + G + ++G G Sbjct: 2591 AAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPG 2650 Query: 222 GPSLCSSQVKKGMPPLPGRAAPTGSEAQ-GPSAFVRMEKGIPASPRCGSPTAMEIDKRGS 280 P L + + G P +PG++ G E GP ++G P P + +K Sbjct: 2651 RPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKG----DRGFDGQP---GPKGDQGEKGER 2703 Query: 281 PTPGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPE 340 TPG PS G G++ S GP P+ L + ++ E P E Sbjct: 2704 GTPGIGGFPGPS-GNDGSA-----GPPGPPGSVGPRGPEGL-------QGQKGERGPPGE 2750 Query: 341 ALVERQGQFLGSETSPAPERGGPRDGEPPGKMGKGYL 377 +V G + E+G P P G+ G+ L Sbjct: 2751 RVVGAPG--VPGAPGERGEQGRPGPAGPRGEKGEAAL 2785 Score = 37.7 bits (86), Expect = 0.051 Identities = 122/519 (23%), Positives = 162/519 (31%), Gaps = 108/519 (20%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 G PG G + PP PG V PG+G P PGG +G + Sbjct: 1878 GAPGILGPQGPPG------LPGPVGPPGQGF--------------PGVPGG--TGPKGDR 1915 Query: 84 SSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQV 143 +GS G G L G+R G PG +L E ++ Sbjct: 1916 GETGS-KGEQG-----------LPGER------GLRGEPGSVPNVDRLL----ETAGIKA 1953 Query: 144 NQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEERRTK 203 + + E ++ S + P R + S PPG+ G E Sbjct: 1954 SALREIVETWDESSGSFLPVPERRRGPKGDS-------GEQGPPGKEGPIGFPGERGLKG 2006 Query: 204 SWGEQCPE-TSGTDSGRKG--GPS-LCSSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEK 259 G+ P+ G G +G GPS L K G+P LPGRA G + R EK Sbjct: 2007 DRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEK 2066 Query: 260 ------------GIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASLTMAT--- 304 G+P +P P ++ P PG P GL GA + Sbjct: 2067 GERGEQGRDGPPGLPGTPGPPGPPGPKVSV-DEPGPGLSGEQGPP-GLKGAKGEPGSNGD 2124 Query: 305 -----------------EVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347 E R P P + + P G+ PP Sbjct: 2125 QGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGP------ 2178 Query: 348 QFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPG-SGEPEVGKRPEETTVSVQSAESS 406 +G P P G P P G G L G PG +G P G V + Sbjct: 2179 --VGGHGDPGPP-GAPGLAGPAGPQGPSGLK-GEPGETGPPGRGLTGPTGAVGLPGPPGP 2234 Query: 407 DSLSWSRLPRALASVGPEEARSGAP-VGGGRWQLSDRVEGGSP-TLGLLG-----GSPSA 459 L + L E + GAP G + DR G P + GL G G P Sbjct: 2235 SGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGP 2294 Query: 460 QPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDR 498 G G+P + + P A + EP GDR Sbjct: 2295 TGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGA-KGDR 2332 >gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] Length = 1466 Score = 48.9 bits (115), Expect = 2e-05 Identities = 114/486 (23%), Positives = 155/486 (31%), Gaps = 59/486 (12%) Query: 20 MKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGG----- 74 M + G PGP+G+ P R PG + G P E P PG Sbjct: 410 MGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPG----PRGERGEAGIPGVPGAKGEDG 465 Query: 75 --WRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRK-- 130 G N G+ P+ + G++ G P GP A + Sbjct: 466 KDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPG 525 Query: 131 ---------LRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFR 181 +R + + K G + ++ P PR P P Sbjct: 526 RDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKG 585 Query: 182 SSSQP--------PGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKG 233 + P PG QG + T G P G D G G P +G Sbjct: 586 NDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPG------PQG 639 Query: 234 MPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSL 293 + LPG P G + + + G P +P G A +RG P LA + Sbjct: 640 LQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPG-GKGDAGAPGERGPPG------LAGAP 692 Query: 294 GLFGASLTMATEVAARVTSTGPHRPQDLALTEP-SGRARELEDLQPPEALVERQGQFLGS 352 GL G + E + GP P A T G E L P ++ G+ G Sbjct: 693 GLRGGAGPPGPE--GGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDK-GEPGGP 749 Query: 353 ETSPAPERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWS 412 P + GPR P G +G P G PG + G+ + S Sbjct: 750 GADGVPGKDGPRG--PTGPIGPPG-PAGQPG----DKGEGGAPGLPGIAGPRGSPGERGE 802 Query: 413 RLPRALASVGPEEARSGAPVG-GGRWQLSDRVEGGSP-TLGLLGGS-PSAQPGTGNV--E 467 P A ++G P G G R ++ EGG P G GGS P+ PG V E Sbjct: 803 TGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGE 862 Query: 468 AGIPSG 473 G P G Sbjct: 863 RGSPGG 868 Score = 45.1 bits (105), Expect = 3e-04 Identities = 141/553 (25%), Positives = 191/553 (34%), Gaps = 102/553 (18%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPG----RGASFL-FPPAESLSPEEPRSPGGWRSG 78 G PGP G P R PG+ + G RG+ PP + P SPG Sbjct: 294 GAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGA---- 349 Query: 79 RRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQREL 138 + + + GS + P G AG PPGP Sbjct: 350 KGEVGPAGSPGSNGAPGQRGEPGPQGH----------AGAQGPPGPPGI----------- 388 Query: 139 QNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSE 198 N K M A I P +P L AR P P P ++ P ++G E Sbjct: 389 -NGSPGGKGEMGPAGI---------PGAPGLMGARGP-PGPAGANGAPG----LRGGAGE 433 Query: 199 ERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPG----------RAAPTGSEA 248 + + GE P ++G G P K G P PG R AP Sbjct: 434 PGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGP 493 Query: 249 QGPSAFVRMEKGIPASPRCGSP-------TAMEIDKRGSP-TPGTRSCLAPSLGLFGA-- 298 GP+ + EKG PA R G+P A E + G P PG R + S G G+ Sbjct: 494 AGPNG-IPGEKG-PAGER-GAPGPAGPRGAAGEPGRDGVPGGPGMRG-MPGSPGGPGSDG 549 Query: 299 --SLTMATEVAARVTSTGPHRPQD----LALTEPSGR----ARELEDLQP----PEALVE 344 + + R GP P+ + P G + E P P+ Sbjct: 550 KPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPG 609 Query: 345 RQGQFLGSETSPAPERGGPRDGE--PPGKMGKGYLP--CGMPG-SGEP-EVGKRPEETTV 398 + G+ G + P P G G+ PPG G LP G PG +G+P E G + + Sbjct: 610 KNGE-TGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAP 668 Query: 399 SVQSAESSDSLSWSRLPRALASVGPEEARSGA-PVG--GGRWQLSDRVEGGSPTLGLLGG 455 + R P LA G R GA P G GG+ G+ L G Sbjct: 669 GAPGGKGDAGAPGERGPPGLA--GAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQG 726 Query: 456 SPSAQPGTGNV----EAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPGNSRVWQG 511 P + G G+ + G P G + +P D + P PPG QPG+ + G Sbjct: 727 MPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGP--AGQPGD-KGEGG 783 Query: 512 TMEKAGLAWTRGT 524 G+A RG+ Sbjct: 784 APGLPGIAGPRGS 796 Score = 40.4 bits (93), Expect = 0.008 Identities = 71/256 (27%), Positives = 86/256 (33%), Gaps = 61/256 (23%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESL-----SPEEPRSPGGWRSG 78 G PG SG PP P+ GS PG FP A L S P PG S Sbjct: 843 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAG---FPGARGLPGPPGSNGNPGPPGPSGSP 899 Query: 79 RRRLNSSSGSGSGSSGS-SVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRE 137 + +G+ GS VS P +GD Q G+ GP A L I Sbjct: 900 GKDGPPGPAGNTGAPGSPGVSGP------KGDAGQPGEKGSPGAQGPPGAPGPLGI---- 949 Query: 138 LQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARS 197 G+ A A + PR SP P + S PG + G R Sbjct: 950 ---------AGITGARGLAGPPGMPGPRG-------SPGPQGVKGESGKPGANGLSGERG 993 Query: 198 EERRTKSWGEQ-CPETSGT--DSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQGPSAF 254 G Q P +GT + GR G P G LPGR G + Sbjct: 994 PP------GPQGLPGLAGTAGEPGRDGNP---------GSDGLPGRDGSPGGKGD----- 1033 Query: 255 VRMEKGIPASPRCGSP 270 R E G P +P G+P Sbjct: 1034 -RGENGSPGAP--GAP 1046 Score = 38.9 bits (89), Expect = 0.023 Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 6/101 (5%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 G G SG PP P+ G+ PGR + P P SPGG G R N Sbjct: 984 GANGLSGERGPPGPQGLPGLAGTAGEPGRDGN----PGSDGLPGRDGSPGG--KGDRGEN 1037 Query: 84 SSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGP 124 S G+ P GDR + AG PGP Sbjct: 1038 GSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGP 1078 Score = 35.4 bits (80), Expect = 0.25 Identities = 134/550 (24%), Positives = 165/550 (30%), Gaps = 121/550 (22%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAE--SLSPEEPRSPGGWRSGRRR 81 G PGP+G PP P PGS SPG + PP E P P P G Sbjct: 171 GYPGPAGPPGPPGPPGTSGHPGSPGSPG----YQGPPGEPGQAGPSGPPGPPG------- 219 Query: 82 LNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNV 141 + SG P G RG G PG K R + Sbjct: 220 --AIGPSGPAGKDGESGRPGRPGE-RGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKG 276 Query: 142 QVNQKVGMFEAHIQAQSSAIQAPRSPR-----LGRARSPSPCPFRSSS------------ 184 + E + ++ A P PR GR P R + Sbjct: 277 ETGAPGLKGENGLPGENGA-PGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPP 335 Query: 185 QPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPG-RAAP 243 PPG G+ + G P ++G G++G P +G P PG +P Sbjct: 336 GPPGTAGFPGSPGAKGEVGPAGS--PGSNGA-PGQRGEPGPQGHAGAQGPPGPPGINGSP 392 Query: 244 TGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASLTMA 303 G GP+ GIP +P + RG P P + AP GL G + Sbjct: 393 GGKGEMGPA-------GIPGAPGL-------MGARGPPGPAGANG-AP--GLRGGAGEPG 435 Query: 304 TEVAARVTSTGPHRPQDLALTEPSGRARELEDLQP--------PEALVERQGQ-FLG--- 351 A R + P + + +D P P A ER F G Sbjct: 436 KNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAG 495 Query: 352 -----SETSPAPERGGPRDGEPPGKMGK--------GYLPCGMPGS--GEPEVGKRPEET 396 E PA ERG P P G G+ G GMPGS G GK Sbjct: 496 PNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPG 555 Query: 397 TVSVQSAESSDSLSWSR-LPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGG 455 + S R P + GP + GAP G E G P G Sbjct: 556 SQGESGRPGPPGPSGPRGQPGVMGFPGP-KGNDGAPGKNG--------ERGGPG----GP 602 Query: 456 SPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTMEK 515 P PG N E G PQ PPG PG + G Sbjct: 603 GPQGPPGK-NGETG---------------------PQGPPGP---TGPGGDKGDTGPPGP 637 Query: 516 AGLAWTRGTG 525 GL GTG Sbjct: 638 QGLQGLPGTG 647 >gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 814 Score = 48.9 bits (115), Expect = 2e-05 Identities = 137/571 (23%), Positives = 185/571 (32%), Gaps = 100/571 (17%) Query: 26 PGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEP---RSP--GGWRSGRR 80 P P TPP P S P A PP +SP P RSP G + G+ Sbjct: 111 PTPKPIVTPPGPAAGESSAMEGMFPVHWAGRGSPPPALISPASPATQRSPGEGAQQPGKC 170 Query: 81 RLNSSSG-SGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLS------PP-------GPEE 126 + SSG S G++ S+ + + AG+ Q V +G S PP PEE Sbjct: 171 LVCPSSGNSERGTNTSAELALALAGKREMQGCQRVCSGDRSVRRRAHPPVHAPARSHPEE 230 Query: 127 AKR---------KLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSP 177 A+ LR+ R + + + H A P G R+ P Sbjct: 231 ARALALPAPTRVHLRLAARCVGRRRRERSDPPGSYHDPALGLRTPGPILEGRG-PRAAGP 289 Query: 178 CPFRSSS---QPPGRVLVQGARSEERRTKSWGEQCPETSGTD----SGRKGGPSLCSSQV 230 CP +++ G V G +RR + G+ S R PS+C Sbjct: 290 CPANTAAVDKTQGGWRAVSGRAEAQRRAADHHSRLRTALGSGLRVCSSRPAAPSVCP--- 346 Query: 231 KKGMPPLPGRA-APTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCL 289 +G PP PG + G+ A R PA R A +RG R+ Sbjct: 347 VRGPPPRPGTVRSQLGARANEGGGAPRP----PAGARVFGVWARGRLRRGCHKCADRAPR 402 Query: 290 APSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARE-----LEDLQPPEALVE 344 AP A T P P+ P+ R L+ L P + Sbjct: 403 APKAAAKAAPAKRTARRRXXXXDTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSR 462 Query: 345 RQGQFLGSETSP---APERGGP------RDGEPP-----------GKMGKGYLPCGMPGS 384 R+ L +P AP P G PP G G G P + Sbjct: 463 RRRCVLLGPVAPAACAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNA 522 Query: 385 GEP-EVGKRPEETTVSVQ--------SAESSDSL------SWSRLPRALASVGPEEARSG 429 G+P + G+ T SA+S D + P A+ G EEAR G Sbjct: 523 GDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGG 582 Query: 430 APVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLEPL---PCWDAAK 486 GGG +G + T A PG EA P R P+ P AA Sbjct: 583 ---GGGLGARGSGCQGAAET--------DASPGATVDEAAAPGPRENSPVAPGPPGGAAA 631 Query: 487 DLKEPQCPPGDRVGVQPGNSRVWQGTMEKAG 517 P G +P R G+ K+G Sbjct: 632 PGGAGTTPQGTATAAKPKRKRT--GSDSKSG 660 >gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo sapiens] Length = 528 Score = 47.8 bits (112), Expect = 5e-05 Identities = 59/195 (30%), Positives = 73/195 (37%), Gaps = 30/195 (15%) Query: 174 SPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSG----RKGGPSLCSSQ 229 SP+ CP RS +L ARS RR + G PE S SG G P + Sbjct: 189 SPASCPSRSCPSAAVFILAVAARSCSRRRRV-GTSGPEASTLSSGLLTCSAGEPPTTGGK 247 Query: 230 VKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGI--PASPRCGSPTAMEIDKRGSPTPGTRS 287 + G L AP + P +R G P SP G D RG+PTPG Sbjct: 248 L-TGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGP------DARGAPTPGR-- 298 Query: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347 G + AT + GP RPQ L + S R R + P A+V R Sbjct: 299 ------ARGGGASWSATPTT--IPGPGPPRPQLLVIPRTS-RCRLV-----PAAVVGRSS 344 Query: 348 QFLGSETSPAPERGG 362 + PA RGG Sbjct: 345 SVTIDHSRPASSRGG 359 >gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo sapiens] Length = 528 Score = 47.8 bits (112), Expect = 5e-05 Identities = 59/195 (30%), Positives = 73/195 (37%), Gaps = 30/195 (15%) Query: 174 SPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSG----RKGGPSLCSSQ 229 SP+ CP RS +L ARS RR + G PE S SG G P + Sbjct: 189 SPASCPSRSCPSAAVFILAVAARSCSRRRRV-GTSGPEASTLSSGLLTCSAGEPPTTGGK 247 Query: 230 VKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGI--PASPRCGSPTAMEIDKRGSPTPGTRS 287 + G L AP + P +R G P SP G D RG+PTPG Sbjct: 248 L-TGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGP------DARGAPTPGR-- 298 Query: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347 G + AT + GP RPQ L + S R R + P A+V R Sbjct: 299 ------ARGGGASWSATPTT--IPGPGPPRPQLLVIPRTS-RCRLV-----PAAVVGRSS 344 Query: 348 QFLGSETSPAPERGG 362 + PA RGG Sbjct: 345 SVTIDHSRPASSRGG 359 >gi|239508959 PREDICTED: hypothetical protein [Homo sapiens] Length = 528 Score = 47.8 bits (112), Expect = 5e-05 Identities = 59/195 (30%), Positives = 73/195 (37%), Gaps = 30/195 (15%) Query: 174 SPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSG----RKGGPSLCSSQ 229 SP+ CP RS +L ARS RR + G PE S SG G P + Sbjct: 189 SPASCPSRSCPSAAVFILAVAARSCSRRRRV-GTSGPEASTLSSGLLTCSAGEPPTTGGK 247 Query: 230 VKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGI--PASPRCGSPTAMEIDKRGSPTPGTRS 287 + G L AP + P +R G P SP G D RG+PTPG Sbjct: 248 L-TGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGP------DARGAPTPGR-- 298 Query: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347 G + AT + GP RPQ L + S R R + P A+V R Sbjct: 299 ------ARGGGASWSATPTT--IPGPGPPRPQLLVIPRTS-RCRLV-----PAAVVGRSS 344 Query: 348 QFLGSETSPAPERGG 362 + PA RGG Sbjct: 345 SVTIDHSRPASSRGG 359 >gi|91208420 bassoon protein [Homo sapiens] Length = 3926 Score = 47.4 bits (111), Expect = 6e-05 Identities = 78/355 (21%), Positives = 121/355 (34%), Gaps = 64/355 (18%) Query: 59 PPAESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGT 118 PP E L P + PG S + + G SG T Sbjct: 3623 PPEEGLWPHDEGGPGRHASAKEHRHGDHGRHSGRH------------------------T 3658 Query: 119 LSPPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPC 178 PG AK R L G EA +Q S+ AP P+ G+ PS Sbjct: 3659 GEEPGRRAAKPHARDL-------------GRHEARPHSQPSS--APAMPKKGQPGYPSSA 3703 Query: 179 PFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLP 238 + SQP R + ++ G+ G +L S + P L Sbjct: 3704 EY---SQP------------SRASSAYHHASDSKKGSRQAHSGPAALQSKAEPQAQPQLQ 3748 Query: 239 GR-AAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFG 297 GR AAP ++Q PS+ + IP+ P + + P ++ L Sbjct: 3749 GRQAAPGPQQSQSPSS-----RQIPSGAASRQPQTQQQQQGLGLQPPQQALTQARLQQQS 3803 Query: 298 ASLTMATEVAARVTSTGPH-RPQDLALTEPSGRAR-ELEDLQPPEALVERQGQFLGSETS 355 T + AA + P P +P+G R E + A +QG+ ++ + Sbjct: 3804 QPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGSKGTAKAPQQGRAPQAQPA 3863 Query: 356 PAPERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLS 410 P P G + G PG G P G PG+ V + + Q+ + ++++S Sbjct: 3864 PGPGPAGVKAGARPG--GTPGAPAGQPGADGESVFSKILPGGAAEQAGKLTEAVS 3916 Score = 35.8 bits (81), Expect = 0.19 Identities = 58/260 (22%), Positives = 89/260 (34%), Gaps = 29/260 (11%) Query: 20 MKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAE-----SLSPEEP----R 70 MK GGP G T P A +S + S + P + ++P Sbjct: 1301 MKQNGGPLTPG--TSPTQLAAPVSFSTPTSSDSSGGRVIPDVRVTQHFAKETQDPLKLHS 1358 Query: 71 SPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRK 130 SP S + + G G+ ++ +P AG RG AG+ P P Sbjct: 1359 SPASPSSASKEIGMPFSQGPGTPATTAVAPCPAGLPRGYMTPASPAGSERSPSPSSTAHS 1418 Query: 131 LRILQRELQNVQVNQKVGMFEAHIQAQS-SAIQAPRSPRLGRARSPSPC---PFRSSSQP 186 + + + + A +A + P S G +P P + +SS P Sbjct: 1419 YGHSPTTANYGSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQPSRAYSYFASSSP 1478 Query: 187 PGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGS 246 P + + E T S G+ P + S + P+ S MP PG P+ Sbjct: 1479 P----LSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASD-----MPRSPGAPTPSPM 1529 Query: 247 EAQGPSAFVRMEKGIPASPR 266 AQG R P++PR Sbjct: 1530 VAQGTQTPHR-----PSTPR 1544 Score = 33.5 bits (75), Expect = 0.96 Identities = 52/223 (23%), Positives = 78/223 (34%), Gaps = 22/223 (9%) Query: 163 APRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGG 222 APRS + SP+ P S ++ P G +ER G Q G+ Sbjct: 233 APRSKSQQQLHSPALSPAHSPAKQP-----LGKPDQERSRGPGGPQ----PGSRQAETAR 283 Query: 223 PSLCSSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPT 282 + + PP GR +P + PS + P + + +A + T Sbjct: 284 ATSVPGPAQAAAPPEVGRVSPQPPQPTKPST----AEPRPPAGEAPAKSATAVPAGLGAT 339 Query: 283 PGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEAL 342 T+ L L GASL A+ + S P G + + + +A Sbjct: 340 EQTQEGLTGKLFGLGASLLTQ---ASTLMSVQPEADTQGQPAPSKGTPKIVFN----DAS 392 Query: 343 VERQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPGSG 385 E + LGS P P G EP +MG G P +P +G Sbjct: 393 KEAGPKPLGSGPGPGPAPGAKT--EPGARMGPGSGPGALPKTG 433 >gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] Length = 1604 Score = 45.4 bits (106), Expect = 2e-04 Identities = 73/272 (26%), Positives = 94/272 (34%), Gaps = 70/272 (25%) Query: 161 IQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRK 220 +Q P P+ + + CP G V R + K GEQ PE G G+ Sbjct: 710 VQGPAGPKGEKGDGCTACPSLQ-----GTVTDMAGRPGQPGPK--GEQGPEGVGRP-GKP 761 Query: 221 GGPSLCSSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRC-GSPTAMEIDKRG 279 G P L Q G+ + G P G QGP E G P P G P RG Sbjct: 762 GQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQG----EPGAPGLPGIQGLP-----GPRG 812 Query: 280 SPTPGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRAREL------ 333 P P S G+ GA TGP P +++ P GR + Sbjct: 813 PPGPTGEKGAQGSPGVKGA--------------TGPVGPPGASVSGPPGRDGQQGQTGLR 858 Query: 334 ----------EDLQPPEALVERQGQ------------FLGSETSPAPERGGPRDGEPPGK 371 E +P E QG ++GS P P+ G P PPG Sbjct: 859 GTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQ-GPPGIPGPPGP 917 Query: 372 MGKGYLPCGMPGS----GEP----EVGKRPEE 395 G L G+PG+ G+P E+G P E Sbjct: 918 PGVPGLQ-GVPGNNGLPGQPGLTAELGSLPIE 948 Score = 35.0 bits (79), Expect = 0.33 Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 9/105 (8%) Query: 170 GRARSPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQ 229 G P P PPG +G R + + G+Q G +G P Sbjct: 1114 GEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQ---------GFQGQPGFPGPP 1164 Query: 230 VKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAME 274 G P G P G +A+ S +R G+P SP P ++ Sbjct: 1165 GPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQ 1209 Score = 32.7 bits (73), Expect = 1.6 Identities = 124/541 (22%), Positives = 166/541 (30%), Gaps = 100/541 (18%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPG-------RGASFLF-------PPAESLSPEEP 69 G PG GS PP P PG+V SPG RG + L PP + P Sbjct: 1036 GPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGAT 1095 Query: 70 RSPG--GWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRL--------------RGDRQQV 113 PG G + R S+ G S P G +GD+ Sbjct: 1096 GPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQ 1155 Query: 114 VAAGTLSPPGPEEAKRKLRI-----LQRELQNVQVNQKVGMFEAHIQAQSSAIQAP---- 164 G PPGP K+ Q E + + G+ + IQ P Sbjct: 1156 GQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLD 1215 Query: 165 ----RSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRK 220 + + G P P PPG G G+ P S G + Sbjct: 1216 GLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAE 1275 Query: 221 GGPSLCSSQVKKGMPPLPGRAAPTGSEAQ-GPSAFVRM----------EKGIPASPRCGS 269 G P Q G P PG P G Q GP+ + E+G+ P Sbjct: 1276 GEPGAMGPQ---GRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPG 1332 Query: 270 PTAMEIDKRGSPTPGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQ-DLALTEPSG 328 P G P P + G G + GP P+ D G Sbjct: 1333 PP-------GHPGPPGEPGTDGAAGKEGP--------PGKQGFYGPPGPKGDPGAAGQKG 1377 Query: 329 RARELEDLQPPEALVERQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPGS---- 384 +A E P + PA ERG P PG G LP G+PGS Sbjct: 1378 QAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHP---GAPGPSGSPGLP-GVPGSMGDM 1433 Query: 385 -GEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALASV----GP--EEARSGAPVGGGRW 437 E+ + + + + + S + P +A+ GP ++ G P G Sbjct: 1434 VNYDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSP 1493 Query: 438 QLSDRVEGGSPTLGLLG--GSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPP 495 L ++ G GL G G P + G++ GI L P PQ PP Sbjct: 1494 GLPGQI-GREGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPP---------GPQGPP 1543 Query: 496 G 496 G Sbjct: 1544 G 1544 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 45.4 bits (106), Expect = 2e-04 Identities = 108/443 (24%), Positives = 145/443 (32%), Gaps = 68/443 (15%) Query: 28 PSGSETPPPPRRAVLSPGSV---------FSPGRGASFLFPPAESLSPEEPRSPGGWRSG 78 PS TPPP R +P SPGR + + + E+ SP Sbjct: 401 PSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKV---TKHKGTEKRESPSPAPKP 457 Query: 79 RRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQREL 138 R+ S S G ++ S + R QQ + S +E ++ + Sbjct: 458 RKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVK---- 513 Query: 139 QNVQVNQKVGMFEAHIQAQSSAI-----QAPRSPRLGRARSPSPCPFR----SSSQPPGR 189 N +VG H ++S++ Q SPR R RSPSP P R S PP R Sbjct: 514 -----NGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPR 568 Query: 190 VLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQ 249 RRT + + S R P S +++ P P T S Sbjct: 569 ---------RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 619 Query: 250 GPSAFVRMEKGIPASPRCG-SPTAMEIDKRGSPTPGTRSCLAPSLGLFGASLTMATEVAA 308 P R P R SP + R SP RS S G+S + +T A Sbjct: 620 PPKR--RASPSPPPKRRVSHSPPPKQ---RSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 674 Query: 309 RVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPA--PERGGPRDG 366 H P P RA + PP SP+ P R R Sbjct: 675 SPQPNKRHSP------SPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTP 728 Query: 367 EP--------PGKMGKGYLPCGMPGSGEPE-VGKRPEETTVSVQSAESSDSLSWS-RLPR 416 EP P + SG PE K+P VQS S S +WS +P Sbjct: 729 EPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQS--QSPSTNWSPAVPV 786 Query: 417 ALA---SVGPEEARSGAPVGGGR 436 A + P R+ GGG+ Sbjct: 787 KKAKSPTPSPSPPRNSDQEGGGK 809 Score = 32.7 bits (73), Expect = 1.6 Identities = 66/299 (22%), Positives = 110/299 (36%), Gaps = 39/299 (13%) Query: 122 PGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSP---- 177 P PE+ +K + ++ + K + +++S + PR R+RS SP Sbjct: 259 PSPEKNSKKEKEKEKTRPRSRSRSKS---RSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP 315 Query: 178 CPFRSSSQ----PPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKG 233 P R S PP R+ RR++S + +S + SG S S+ Sbjct: 316 SPRRRPSPRRRTPPRRM---PPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPK 372 Query: 234 MPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTP-----GTRSC 288 PP + P + PSA + P+ P P R SPTP +S Sbjct: 373 KPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKT-----RHSPTPQQSNRTRKSR 427 Query: 289 LAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALT---EPSGRARELEDLQPPEALVER 345 ++ S G +T R + + +P+ + L+ E G D R Sbjct: 428 VSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRR 487 Query: 346 QGQFLGSETSPA-------PERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETT 397 Q Q S++ + P+R ++GE + + + P S P KR +ET+ Sbjct: 488 QNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRR--RRHSP---SRSASPSPRKRQKETS 541 >gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] Length = 1388 Score = 45.1 bits (105), Expect = 3e-04 Identities = 67/290 (23%), Positives = 99/290 (34%), Gaps = 37/290 (12%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 G PG G PP + PG + PG PP P P PG Sbjct: 694 GDPGNRGLPGPPGKKGQAGPPGVMGPPG-------PPG----PPGPPGPGCTMGLGFEDT 742 Query: 84 SSSGSGSGSSGSSVSSPSWAGRLRGDR--------QQVVAAGTLSPPGPEEAKRKLRILQ 135 SGS + +S P+ A L+G++ + + A + PPGP +++L Sbjct: 743 EGSGSTQLLNEPKLSRPTAAIGLKGEKGDRGPKGERGMDGASIVGPPGPRGPPGHIKVLS 802 Query: 136 RELQNV--------QVNQKVGMFEAHIQAQSSAIQAPRSPR--LGRARSPSPCPFRSSSQ 185 L N+ + + VG PR P+ G P + Sbjct: 803 NSLINITHGFMNFSDIPELVGPPGPDGLPGLPGFPGPRGPKGDTGLPGFPGLKGEQGEKG 862 Query: 186 PPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTG 245 PG +L + E K GE + G KG P + + G+P PGR G Sbjct: 863 EPGAILTEDIPLERLMGKK-GEPGMHGAPGPMGPKGPP---GHKGEFGLPGRPGRPGLNG 918 Query: 246 SEAQ--GPSAFVRMEKGIPASPRCGSPTAMEIDKRGS--PTPGTRSCLAP 291 + P ++ G+P P P I+ +G+ P P C P Sbjct: 919 LKGTKGDPGVIMQGPPGLPGPPGPPGPPGAVINIKGAIFPIPVRPHCKMP 968 >gi|223633935 hypothetical protein LOC254427 [Homo sapiens] Length = 435 Score = 44.7 bits (104), Expect = 4e-04 Identities = 63/238 (26%), Positives = 91/238 (38%), Gaps = 24/238 (10%) Query: 28 PSGSETPPPPRRAVLSPG----------SVFSP---GRGASFLFPPAESLSPEEPRSPGG 74 P TP PPRR + +P SV +P + S E+LSP P G Sbjct: 162 PPLPSTPDPPRRELRAPSPPVEHPRLLRSVPTPLVMAQKISERMAGNEALSPTSPFREG- 220 Query: 75 WRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRIL 134 R G R ++ G SG G S P+ R +V G P ++ + + Sbjct: 221 -RPGEWRTPAARGPRSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAVSVQ 279 Query: 135 QRELQNV-QVNQKVGMFEAHIQAQSSAIQAPRSP-RLGRARS-PSPC-PFRSSSQPP-GR 189 +R Q + ++ G F A A A SP R+ R R P P R+ Q P G Sbjct: 280 ERRAQVLATIHGHAGAFPAAGDAGEGAPGGGSSPERVARGRGLPGPAESLRAGGQAPRGP 339 Query: 190 VLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSE 247 L G S KS +G + GP+L S++ ++ PG P G++ Sbjct: 340 ALANGFPSAHEALKS-APSSFAPAGKSLCFRPGPALPSTRARQS---FPGPRQPNGAQ 393 >gi|156071470 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 [Homo sapiens] Length = 889 Score = 44.3 bits (103), Expect = 5e-04 Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 16/133 (12%) Query: 166 SPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEER--RTKSWGEQCPETSGTDSGRKGGP 223 SPRL R P P P +S PP GA + R RT +G G + GP Sbjct: 754 SPRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYG-------GLPAAPLAGP 806 Query: 224 SLCSSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEI-----DKR 278 +L + ++ + PL A GP+A R ++PR G A D+R Sbjct: 807 ALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASS--STPRLGPTPAARAAAPSPDRR 864 Query: 279 GSPTPGTRSCLAP 291 S +PG L P Sbjct: 865 DSASPGAAGGLDP 877 Score = 34.7 bits (78), Expect = 0.43 Identities = 37/120 (30%), Positives = 43/120 (35%), Gaps = 20/120 (16%) Query: 23 GGGPGPSGSETP-----------PPPRRAVLSPGSVFSPGRG-ASFLFPPAESLSPEEPR 70 GG PG S TP PP ++ P PG G A PP P E Sbjct: 7 GGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAA 66 Query: 71 SPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRL-RGDRQQVVAAGTLSPPGPEEAKR 129 GG R R +SS G +S + S G RG+ Q SP GPE R Sbjct: 67 DEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQ-------CSPAGPEGPAR 119 >gi|158854042 hypothetical protein LOC222183 [Homo sapiens] Length = 653 Score = 44.3 bits (103), Expect = 5e-04 Identities = 101/405 (24%), Positives = 131/405 (32%), Gaps = 56/405 (13%) Query: 44 PGSVFSPGRGASFLFPPAESLSP---EEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSP 100 P S + RG + S SP ++ + GG R R++ S GSS Sbjct: 144 PASCYRGHRGYRTKHWSSSSASPPPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKK 203 Query: 101 SWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSA 160 + R DR ++RK R R + + + H ++ Sbjct: 204 KSVKKHRRDRSD------------SGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRR 251 Query: 161 IQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEERRT---KSWGEQCPETSGTDS 217 S G + SPS S S+ P R L R E R+T +S G + P SG Sbjct: 252 SHRHSS---GSSHSPSLSSHYSDSRSPSR-LSPKHRDEGRKTGSQRSSGSRSPSPSGGSG 307 Query: 218 G----RKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAM 273 R GG S Q PG A + PS VR +K A+P +P A Sbjct: 308 WGSPQRNGG----SGQRSGAHGGRPGSAHSPPDKPSSPSPRVR-DKAAAAAP---TPPA- 358 Query: 274 EIDKRGSPTPGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRAREL 333 RG +P RS APS G A R R + + P R R Sbjct: 359 ----RGKESPSPRS--APSSQ--GRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRR 410 Query: 334 EDLQPPEALVERQGQFLGSETS--------PAPERGGPRDGEPPGKMGKGYLPCGMPGSG 385 PP + S S P PE G R GK K P P S Sbjct: 411 PRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPAST 470 Query: 386 EPEVGKR-----PEETTVSVQSAESSDSLSWSRLPRALASVGPEE 425 P G PE + S S S SR P S E+ Sbjct: 471 SPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEK 515 Score = 33.1 bits (74), Expect = 1.3 Identities = 27/78 (34%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Query: 24 GGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLN 83 GG G E PP R A SP SPG P +S S P W S R Sbjct: 452 GGHGKRAKERPPRARPASTSP----SPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSK 507 Query: 84 SSSGSGSGSSGSSVSSPS 101 S S S S SPS Sbjct: 508 SRSRSAEKRPHSPSRSPS 525 >gi|22726201 inositol polyphosphate multikinase [Homo sapiens] Length = 416 Score = 43.9 bits (102), Expect = 7e-04 Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 43/200 (21%) Query: 699 CLDRLMVDVLRPFVPAYHG---DVVKDGERYNQMDDLLADFDSPCVMDCKMGIRTYLEEE 755 C D ++++ LR ++P Y+G + Y +++D+ F+ PC+MD K+G ++Y Sbjct: 98 CFDGVLLE-LRKYLPKYYGIWSPPTAPNDLYLKLEDVTHKFNKPCIMDVKIGQKSY---- 152 Query: 756 LTKARKKPSLRKDMYQKMIEVDPEAPTEEEKAQRAVTKPRYMQWRETISSTATLGFRIEG 815 DP A EK Q+ V+K M+ LG R+ Sbjct: 153 ---------------------DPFA--SSEKIQQQVSKYPLME----EIGFLVLGMRVYH 185 Query: 816 IKKED-GTVNRDFKKTKTREQVTEAFREFTKGNHNILIAYRDRLKA-IRTTLEVSPFFKC 873 + + T N+ + ++ T+E + + F HN +D + A I+ ++ +F+ Sbjct: 186 VHSDSYETENQHYGRSLTKETIKDGVSRFF---HNGYCLRKDAVAASIQKIEKILQWFEN 242 Query: 874 HEVI---GSSLLFIHDKKEQ 890 + + SSLLF+++ Q Sbjct: 243 QKQLNFYASSLLFVYEGSSQ 262 >gi|112821681 G protein-regulated inducer of neurite outgrowth 1 [Homo sapiens] Length = 1008 Score = 43.9 bits (102), Expect = 7e-04 Identities = 96/394 (24%), Positives = 147/394 (37%), Gaps = 69/394 (17%) Query: 10 SLVIMNSANEMKSGGGPGPSG--SETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPE 67 S V A+ SG SG +ET P + +PG GA L E+ Sbjct: 615 SPVTTTKADPRASGKAQPQSGGKAETKLPGQEGAAAPGEA-----GAVCL--KKETPQAS 667 Query: 68 EPRSPGGWRSGRRRLNSSSGSGSGSS-GSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEE 126 E PG S R+ +SG G S G + S+PS + V +L P Sbjct: 668 EKVDPG---SCRKAEPLASGKGEPVSLGKADSAPS--RKTESPSLGKVVPLSLEKTKPSS 722 Query: 127 AKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGR------ARSPSPCPF 180 + R+L ++ L + + + E ++ ++ + + + LG+ SPCP Sbjct: 723 SSRQLD--RKALGSARSPEGARGSEGRVEPKAEPVSSTEASSLGQKDLEAAGAERSPCP- 779 Query: 181 RSSSQPPGRVLVQGARSEERRTK--SWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLP 238 +++ PPG R+ + TK SW P D+G + G C S M P Sbjct: 780 EAAAPPPG------PRTRDNFTKAPSWEASAPPPPREDAGTQAGAQACVSVAVSPMSPQD 833 Query: 239 GRAAPTGSEAQGPSAFVRMEKGIPASPRCGSP-----TAMEIDKRGSPT------PGTRS 287 G G SAF A+PR SP +++ + T P T Sbjct: 834 G---------AGGSAF-----SFQAAPRAPSPPSRRDAGLQVSLGAAETRSVATGPMTPQ 879 Query: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRP-QDLALTEPS------GRARELEDL-QPP 339 AP + + +AA V P P +D++ E G A E+E L Sbjct: 880 AAAPP-AFPEVRVRPGSALAAAVAPPEPAEPVRDVSWDEKGMTWEVYGAAMEVEVLGMAI 938 Query: 340 EALVERQGQFLGSETSPAPERGGPRDGEPPGKMG 373 + +ERQ + G + +PAP P PG+ G Sbjct: 939 QKHLERQIEEHGRQGAPAPP---PAARAGPGRSG 969 >gi|18079216 CASK interacting protein 1 [Homo sapiens] Length = 1431 Score = 43.1 bits (100), Expect = 0.001 Identities = 106/406 (26%), Positives = 144/406 (35%), Gaps = 77/406 (18%) Query: 19 EMKSGGGPGPSGSETP---PPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGW 75 E+ S GG G + P P PR A SP PGR A+ L S+ +E PGG Sbjct: 1009 ELSSIGGGGRAARRPPEGHPTPRPA--SP----EPGRVATVL----ASVKHKEAIGPGGE 1058 Query: 76 RSGRRRLNSSSGSG------SGSSGSSVSSP---SWAGRLRGDRQQVVAAGTLSPP-GPE 125 RRR S +G G S+ P GR R AG PP Sbjct: 1059 VVNRRRTLSGPVTGLLATARRGPGESADPGPFVEDGTGRQRPRGPSKGEAGVEGPPLAKV 1118 Query: 126 EAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQ 185 EA L+ R QN Q N K I +S ++ R P+ + R P P Sbjct: 1119 EASATLKRRIRAKQNQQENVK------FILTESDTVK--RRPK-AKEREAGPEP-----P 1164 Query: 186 PPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTG 245 PP V G + RR S PE + P+ + +PPLP P Sbjct: 1165 PPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAH-----LPPLP----PPE 1215 Query: 246 SEAQGPSAFVRMEKGIPASPRCGSPTAMEIDK-RGSPTPGTRSCLAPSLGLFGASLTMAT 304 EA+ P+ P SP+ + K +GSPTP ++ P G + A Sbjct: 1216 GEARKPAK-------PPVSPK--PVLTQPVPKLQGSPTPTSKKVPLPGPG--SPEVKRAH 1264 Query: 305 EVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPERGGPR 364 V+ P P T P +P +A+ G +P+P R P Sbjct: 1265 GTPPPVSPKPPPPP-----TAP----------KPVKAVAGLPSGSAGPSPAPSPARQPPA 1309 Query: 365 D-GEPPG-KMGKGYLPCGMPGSGEP--EVGKRPEETTVSVQSAESS 406 +PPG G P P G P V +P + +A ++ Sbjct: 1310 ALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAA 1355 >gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo sapiens] Length = 321 Score = 43.1 bits (100), Expect = 0.001 Identities = 49/168 (29%), Positives = 67/168 (39%), Gaps = 18/168 (10%) Query: 344 ERQGQFLGSETSPAPERGG--PRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQ 401 + +GQ L S +PE G R G+P + + L PGSGE V + ++TV Sbjct: 138 QARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLT---PGSGEFGVRSQSCDSTVP-- 192 Query: 402 SAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTL-----GLLGGS 456 ES + W++ + GP A G GRW + G+ T L + Sbjct: 193 --ESLERALWAQSSQLAG--GPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAA 248 Query: 457 PSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPG 504 S P G E P R L P P A + P+CPPG PG Sbjct: 249 LSCGPSWG--EDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPG 294 >gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo sapiens] Length = 321 Score = 43.1 bits (100), Expect = 0.001 Identities = 49/168 (29%), Positives = 67/168 (39%), Gaps = 18/168 (10%) Query: 344 ERQGQFLGSETSPAPERGG--PRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQ 401 + +GQ L S +PE G R G+P + + L PGSGE V + ++TV Sbjct: 138 QARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLT---PGSGEFGVRSQSCDSTVP-- 192 Query: 402 SAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTL-----GLLGGS 456 ES + W++ + GP A G GRW + G+ T L + Sbjct: 193 --ESLERALWAQSSQLAG--GPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAA 248 Query: 457 PSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPG 504 S P G E P R L P P A + P+CPPG PG Sbjct: 249 LSCGPSWG--EDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPG 294 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 43.1 bits (100), Expect = 0.001 Identities = 133/620 (21%), Positives = 202/620 (32%), Gaps = 89/620 (14%) Query: 63 SLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPP 122 S SP+ P GW R + S SP+ GR R + G Sbjct: 534 SRSPQRP----GWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRS--RTPARRGRSRSR 587 Query: 123 GPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRS 182 P + + R R + + G + A+ + R R+RSP+ RS Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647 Query: 183 SSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGR-------------KGGPSLCSSQ 229 S+ P R +R+ RR +S SG R + G S S Sbjct: 648 RSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSL 707 Query: 230 VKKGM--PPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKR--------- 278 V++G P R +GS ++ R K + R S ++ E+ K Sbjct: 708 VRRGRSHSRTPQRRGRSGSSSE------RKNKSRTSQRRSRSNSSPEMKKSRISSRRSRS 761 Query: 279 -GSPTPGTRSCLAPSLGLFGAS--LTMATEVAARVTSTGPHRPQDLALTEPSGRARELED 335 SP +S L+ L G+S ++ R + +G +P+ + T P R Sbjct: 762 LSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPP--RRSRSSS 819 Query: 336 LQPPEALVERQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGMPGSGEPE----VGK 391 PP+ + + S +SP P+ + G PP + G P S P+ Sbjct: 820 SPPPKQKSKTPSRQSHSSSSPHPK---VKSGTPP-RQGSITSPQANEQSVTPQRRSCFES 875 Query: 392 RPEETTVSVQSAESSDSLSWSRLPRALASVGPEE--ARSGAPVGGGRWQLSDRVEGGSPT 449 P+ S S S S S PR +S P + +RS +P + +S R Sbjct: 876 SPDPELKS--RTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQR----- 928 Query: 450 LGLLGGSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPGNSRVW 509 S S+ P V + R PC +++ P G +++V Sbjct: 929 ----SHSGSSSPSPSRVTSRTTPRRSRSVSPC----SNVESRLLPRYSHSGSSSPDTKVK 980 Query: 510 QGTMEKAGLAWTRGTGVQSEGTWESQRQDSDALPSPELLPQDPDKPFLRKACSPSNIPAV 569 T + Q P P++ Q P P L + SP P Sbjct: 981 PETPPR-------------------QSHSGSISPYPKVKAQTPPGPSLSGSKSP--CPQE 1019 Query: 570 IITDMGTQE-DGALEETQGSPRGNLPLRK-LSSSSASSTGFSSSYEDSEEDISSDPERTL 627 D Q G+L G P SS G S + D D SS R Sbjct: 1020 KSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQS 1079 Query: 628 DPNSAFLHTLDQQKPRVSKS 647 S L + Q P+ +S Sbjct: 1080 HSESPSLQSKSQTSPKGGRS 1099 Score = 40.4 bits (93), Expect = 0.008 Identities = 68/277 (24%), Positives = 98/277 (35%), Gaps = 58/277 (20%) Query: 46 SVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGR 105 SV +PG S + P S ++P + + + R +SSS S S SS SS SS S + Sbjct: 2495 SVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS 2554 Query: 106 LRGDRQQVVAAGTL-------------------------SPPGPEEAKRKLRILQRELQN 140 G +L PP P AKRK R + Sbjct: 2555 SSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614 Query: 141 VQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPC---------PFRSSSQPPGRVL 191 + + + SS+ + S + SPSP P PPG Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG--- 2671 Query: 192 VQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMP-PLPGRAAPTGSEAQG 250 ERR++S + P S DS SL S V++ P P P S ++ Sbjct: 2672 -------ERRSRS--PRKPIDSLRDS-----RSLSYSPVERRRPSPQPSPRDQQSSSSER 2717 Query: 251 PSAFVRMEKGIPASP----RCGSPTAMEIDKRGSPTP 283 S R ++G SP R +P+ + R S +P Sbjct: 2718 GSR--RGQRGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752 Score = 39.3 bits (90), Expect = 0.018 Identities = 74/285 (25%), Positives = 101/285 (35%), Gaps = 55/285 (19%) Query: 182 SSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRA 241 SS P V G S + + + P T R+ S S ++K G+P P R Sbjct: 1383 SSELSPDAVEKAGMSSNQSISSPVLDAVPRTPS----RERSSSASSPEMKDGLPRTPSRR 1438 Query: 242 APTGSE------AQGPS--AFVRMEKGIPASPRCGSPTAMEIDKRGSP-----TPGTRS- 287 + +GS + PS + G+ PR S E D P TP RS Sbjct: 1439 SRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSR 1498 Query: 288 ----------CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQ 337 CL P G+ ++ + AR L SG ++EL D++ Sbjct: 1499 SPSSPELNNKCLTPQRERSGSESSVDQKTVART---------PLGQRSRSGSSQEL-DVK 1548 Query: 338 PPEALVERQGQFLGSETSP-------APERGGPRDGEPPGKMGKGYLPCGMPGSG-EPEV 389 P + ER S++SP P R R G P K L SG PEV Sbjct: 1549 PSASPQERS----ESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEV 1604 Query: 390 GKRPEETTVSVQSAESSDSLSWSRLPRALASVGPEEARSGAPVGG 434 +P QS S + PRAL P +RSG+ G Sbjct: 1605 KDKP-RAAPRAQSGSDSSPEPKAPAPRAL----PRRSRSGSSSKG 1644 Score = 37.0 bits (84), Expect = 0.087 Identities = 75/301 (24%), Positives = 113/301 (37%), Gaps = 48/301 (15%) Query: 21 KSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPE--EPRSPGGWRSG 78 +SG P P R S V R A P A+S S EP++P Sbjct: 1578 RSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAA----PRAQSGSDSSPEPKAPAPRALP 1633 Query: 79 RRRLNSSSGSGSG----SSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRIL 134 RR + SS G G S S+ SSP + R R+ G+ S P P+ R Sbjct: 1634 RRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR-----GSRSSPEPKTKSRTPPRR 1688 Query: 135 QRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSP---SPCPF---------RS 182 + + ++ +K + A SS R+P R RSP SP P RS Sbjct: 1689 RSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHR-RSPSVSSPEPAEKSRSSRRRRS 1747 Query: 183 SSQPPGRVL-------------VQGARSEERRTKSWGEQCPETSGT--DSGRKGGPSLCS 227 +S P + +Q +RS RR K+ + + SG+ + R+ S Sbjct: 1748 ASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSR 1807 Query: 228 SQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDK-RGSPTPGTR 286 S+V + G + + + + R +G +P PT+ + + R SP P R Sbjct: 1808 SRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTP----PTSRKRSRSRTSPAPWKR 1863 Query: 287 S 287 S Sbjct: 1864 S 1864 Score = 34.7 bits (78), Expect = 0.43 Identities = 158/690 (22%), Positives = 225/690 (32%), Gaps = 126/690 (18%) Query: 29 SGSETPPPPRRAVLSPGSVF--SPGRGASFLFPPAESLSPEEPRSPGGWRSGRRR---LN 83 S S TPP RR S + R S L S S PR+ G RS R + Sbjct: 2018 SRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRS-RTPRTARGKRSLTRSPPAIR 2076 Query: 84 SSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGT----------LSP--------PGPE 125 S SGS S S ++P G R VA + +SP PG Sbjct: 2077 RRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGML 2136 Query: 126 EAKRKLRILQRELQN------------VQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRAR 173 E R LQ + +Q+ + E H AQS A + LG AR Sbjct: 2137 EPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENH--AQSRIALALTAISLGTAR 2194 Query: 174 SPSPCPFRS----SSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQ 229 P SQ P V + R+ + + P S +L S++ Sbjct: 2195 PPPSMSAAGLAARMSQVPAPVPLMSLRTAP--AANLASRIPAASAA------AMNLASAR 2246 Query: 230 VKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIP-----------ASPRCGSPTAMEIDKR 278 P +P A ++++ P+A M P A PR +PTA ++ Sbjct: 2247 T----PAIP--TAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPR--TPTAPAVNLA 2298 Query: 279 GSPTPGTRSCLA------PSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARE 332 G+ TP + L+ P S + + A GP A +G +R Sbjct: 2299 GARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAG-SRT 2357 Query: 333 LEDLQPPEALVERQGQFLGSE--TSP-----APERGGPRDGEPPGKMGKGYLPCGMPGSG 385 L P R L TSP A ER R P + P P Sbjct: 2358 AAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQS 2417 Query: 386 EPEVGKRPEETTVSVQSAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEG 445 + P S+ + S S LP A ++ RS P SD+ Sbjct: 2418 RMTSERAPSP------SSRMGQAPSQSLLPPA-----QDQPRSPVPSA-----FSDQSRC 2461 Query: 446 GSPTLGLLGGSPSAQPG---TGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQ 502 + GS S G T AG +G + P P + D+ EP G + Q Sbjct: 2462 LIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHS-DVGEPPASTGAQ---Q 2517 Query: 503 PGNSRVWQGTMEKAGLAWTRGTGVQSEGTWESQRQDSDALPSPE-----LLPQDPDKPFL 557 P Q E+ + + + S + S S + S LP P+ L Sbjct: 2518 PSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVA-L 2576 Query: 558 RKACSPSNIPAVIITDMGTQEDGALEETQGSPRGNLPL-RKLSSSSASSTGFSSSYEDSE 616 ++ SP+ P + + G P P RK SSS+SS+ SSS S Sbjct: 2577 KRVPSPTPAPKEAVRE-------------GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSS 2623 Query: 617 EDISSDPERTLDPNSAFLHTLDQQKPRVSK 646 SS + +S+ + P +K Sbjct: 2624 SSSSSSSSSSSSSSSSSSSSSSSSSPSPAK 2653 Score = 34.3 bits (77), Expect = 0.56 Identities = 147/686 (21%), Positives = 232/686 (33%), Gaps = 124/686 (18%) Query: 29 SGSETPP-------PPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRR 81 SGS +P PPR++ GS+ SP PP SLS + P +S Sbjct: 970 SGSSSPDTKVKPETPPRQS--HSGSI-SPYPKVKAQTPPGPSLSGSKSPCPQE-KSKDSL 1025 Query: 82 LNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQRELQNV 141 + S GS S +G S+P Q+ SP + + + Sbjct: 1026 VQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDH-----------RSDTSSP 1074 Query: 142 QVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQP---------PGRVLV 192 +V Q +H ++ S ++ SP+ GR+RS SP +S P +L Sbjct: 1075 EVRQ------SHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLK 1128 Query: 193 QGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAPTGSEAQGPS 252 G E+ R +S P + S+ K +PP A + S Sbjct: 1129 SGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFS 1188 Query: 253 AFV---RMEKGI--------PASPRCGSPTAMEIDKRGSPTPGT------RSCLAPSLGL 295 F R E + P R G+ ++ E ++ S P + + S Sbjct: 1189 PFPVQDRPESSLVFKDTLRTPPRERSGAGSSPETKEQNSALPTSSQDEELMEVVEKSEEP 1248 Query: 296 FGASLT-MATEVAARVTSTGPHRPQ-------DLALTEPSGRARELEDLQPPEALVERQG 347 G L+ +++E+ TS P+ L L + +A LE ++ P G Sbjct: 1249 AGQILSHLSSELKEMSTSNFESSPEVEERPAVSLTLDQSQSQA-SLEAVEVPSMASSWGG 1307 Query: 348 QFLGSE-----TSPAPER--GGP---RDGEPPG-KMGKGYLPCGMPGSGEPEVGKRPEET 396 E SP E G P R+ P G +M G+ P + + + Sbjct: 1308 PHFSPEHKELSNSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVKEDLNGPFLNQLETDP 1367 Query: 397 TVSV--QSAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLG 454 ++ + QS SS S P A+ G +S SP L + Sbjct: 1368 SLDMKEQSTRSSGHSSSELSPDAVEKAG----------------MSSNQSISSPVLDAVP 1411 Query: 455 GSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTME 514 +PS + + S M + LP + + R G PG R GT Sbjct: 1412 RTPSRER-----SSSASSPEMKDGLPRTPSRR----------SRSGSSPG-LRDGSGTPS 1455 Query: 515 KAGLAWTRGTGVQSEGTWESQRQDSDALPSPELLPQDPDKPFLRKACSPSNIPAVIITDM 574 + L+ + T R + D+ P P+ LPQ P +P R SP + Sbjct: 1456 RHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTP-RPRSRSPSSPELNNKCLTPQ- 1513 Query: 575 GTQEDGALEETQGSPRGNLPLRKLSSSSASS----TGFSSSYEDSEEDISSDP------- 623 + G+ PL + S S +S +S E SE D S D Sbjct: 1514 -RERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTP 1572 Query: 624 --ERTLDPNSAFLHTLDQQKPRVSKS 647 +R+ +S + + + PR S+S Sbjct: 1573 LRQRSRSGSSPEVDSKSRLSPRRSRS 1598 Score = 33.5 bits (75), Expect = 0.96 Identities = 72/338 (21%), Positives = 113/338 (33%), Gaps = 46/338 (13%) Query: 163 APRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSEER---------RTKSWGEQCPETS 213 AP R+ R+PSP Q P + L+ A+ + R +++ Q + Sbjct: 2413 APSQSRMTSERAPSPSS--RMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVA 2470 Query: 214 GTDSGRKGGPSLCSSQV--KKGMPPLPGRAAP--------TGSEAQGPSAFVRMEKGIPA 263 G+ S G + +S GM +P P + AQ PSA ++ PA Sbjct: 2471 GSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQ---PA 2527 Query: 264 SPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLF----GASLTMATEVAA-RVTSTGPHRP 318 R S ++ S + + S + S G+SL + EVA RV S P Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPK 2587 Query: 319 QDLALTEP-------------SGRARELEDLQPPEALVERQGQFLGSETSPAPERGGPRD 365 + + P S + + S +S + Sbjct: 2588 EAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2647 Query: 366 GEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRALAS--VGP 423 P K G LP P +R + S S SLS+S + R S P Sbjct: 2648 SPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSP 2707 Query: 424 EEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQP 461 + +S + G R R + SP+ +PS +P Sbjct: 2708 RDQQSSSSERGSR--RGQRGDSRSPSHKRRRETPSPRP 2743 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 42.4 bits (98), Expect = 0.002 Identities = 53/227 (23%), Positives = 74/227 (32%), Gaps = 12/227 (5%) Query: 23 GGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGGWRSGRRRL 82 G P +GS P P PG G +F +S +P+ P + G Sbjct: 2502 GSYPPAAGSSEPKAPWPKATDGDLAQEPGPGLTF----EDSGNPKSPDKAQAEQDGAEES 2557 Query: 83 NSSSGSGSGSSGSSVSSPS----WAGRLRGDRQQVVAAGTLSPPGPEEAKRKLRILQREL 138 SSS S SGSS SS SS S G GD+ GT + R Sbjct: 2558 ESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSS 2617 Query: 139 QNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVLVQGARSE 198 + + + + SS+ + S + S S SSS E Sbjct: 2618 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SSSTTDE 2675 Query: 199 ERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPL--PGRAAP 243 + S E P + S + P+ + Q K P PG+ P Sbjct: 2676 DSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTP 2722 Score = 38.5 bits (88), Expect = 0.030 Identities = 85/460 (18%), Positives = 147/460 (31%), Gaps = 69/460 (15%) Query: 184 SQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRAAP 243 ++P +LV A+ R+T + T G+ GG + K GR Sbjct: 2289 AEPSPALLVPSAKRRSRKT---------SKDTGEGKDGGTAGSEEPGAKAR----GRGRK 2335 Query: 244 TGSEAQGPSAFVRMEKG-----IPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGA 298 ++A+G A +E+G +P++P P++ K+ P P + AP Sbjct: 2336 PSAKAKGDRA-ATLEEGNPTDEVPSTPLALEPSSTPGSKKSPPEPVDKRAKAPK------ 2388 Query: 299 SLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAP 358 A S P EP P L+ + + A Sbjct: 2389 -----ARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPLITMPATRPKPKKARAA 2443 Query: 359 ERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRAL 418 E G + PG+ + + G P+ K E + E + W P++L Sbjct: 2444 EESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLR----EDPGAGGWQE-PKSL 2498 Query: 419 ASVGPEEARSGAPVGGGRWQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLEP 478 S+G +G+ W + T G L P PG ++G P Sbjct: 2499 LSLGSYPPAAGSSEPKAPWPKA--------TDGDLAQEPG--PGLTFEDSGNP------- 2541 Query: 479 LPCWDAAKDLKEPQCPPGDRVGVQPGNSRVWQGTMEKAGLAWTRGTGVQSEGTWESQRQD 538 K P ++ G + S + + + + +G ++EG E + Sbjct: 2542 ----------KSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNG 2591 Query: 539 SDAL-------PSPELLPQDPDKPFLRKACSPSNIPAVIITDMGTQEDGALEETQGSPRG 591 + P + S S+ + + + + + S Sbjct: 2592 DGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2651 Query: 592 NLPLRKLSSSSASSTGFSSSYEDSEEDISSDPERTLDPNS 631 + SSSS+SS+ SSS D + SSD E P + Sbjct: 2652 SSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTA 2691 Score = 33.5 bits (75), Expect = 0.96 Identities = 66/323 (20%), Positives = 103/323 (31%), Gaps = 56/323 (17%) Query: 62 ESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSP 121 E+L E GGW+ + L S GS ++GSS W GD Q Sbjct: 2479 EALLLREDPGAGGWQEPKSLL--SLGSYPPAAGSSEPKAPWPKATDGDLAQ--------E 2528 Query: 122 PGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFR 181 PGP + + S P+SP +A Sbjct: 2529 PGPG----------------------------LTFEDSG--NPKSPDKAQAEQDGAEESE 2558 Query: 182 SSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGRA 241 SSS G+ S + S G ET G + G K G C + + A Sbjct: 2559 SSSSSS-----SGSSSSSSSSSSSGS---ETEGEEEGDKNGDGGCGTGGRNCSAASSRAA 2610 Query: 242 APTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASLT 301 +P S + S+ +S S ++ S + + S + S +S + Sbjct: 2611 SPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2670 Query: 302 MATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPERG 361 T+ + +S P A PS +A P ++ G+ S SP + Sbjct: 2671 STTDEDSSCSSDDEAAPAPTA--GPSAQA------ALPTKATKQAGKARPSAHSPGKKTP 2722 Query: 362 GPRDGEPPGKMGKGYLPCGMPGS 384 P+ PP + + P G+ Sbjct: 2723 APQPQAPPPQPTQPLQPKAQAGA 2745 Score = 31.6 bits (70), Expect = 3.7 Identities = 27/87 (31%), Positives = 32/87 (36%) Query: 15 NSANEMKSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPGG 74 +S+ S SGSET G + GR S A S + S Sbjct: 2563 SSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSS 2622 Query: 75 WRSGRRRLNSSSGSGSGSSGSSVSSPS 101 S +SSS S S SS SS SS S Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSSSSS 2649 >gi|148806908 fibronectin type III domain containing 1 [Homo sapiens] Length = 1894 Score = 42.4 bits (98), Expect = 0.002 Identities = 74/296 (25%), Positives = 103/296 (34%), Gaps = 47/296 (15%) Query: 26 PGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEP--------RSPGGWR- 76 P + P PRR +PGR PP + S P RSP R Sbjct: 982 PAARSQQHPSVPRR--------MTPGRAPQQQPPPPVATSQHHPGPQSRDAGRSPSQPRL 1033 Query: 77 ----SGRRRLNSSSGSGSGSSGSSVSSPSWA------------GRLRGDRQQVVAAGTLS 120 +GR R S S S S + SS G D +V A + Sbjct: 1034 SLTQAGRPRPTSQGRSHSSSDPYTASSRGMLPTALQNQDEDAQGSYDDDSTEVEAQDVRA 1093 Query: 121 PPGPEEAKRKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPF 180 P AK L + Q V+ G H + A R R G +S + P Sbjct: 1094 PAHAARAKEAAASLPKH-QQVESPTGAGAGGDHRSQRGHAASPARPSRPGGPQSRARVPS 1152 Query: 181 RSS---SQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSGRKGGPSLCSSQVKKGMPPL 237 R++ S+PP + + S+ +++ S + E +G G G L SS V P Sbjct: 1153 RAAPGKSEPPSK---RPLSSKSQQSVSAEDDEEEDAGFFKG--GKEDLLSSSV----PKW 1203 Query: 238 PGRAAPTGS-EAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPS 292 P + P G +A G A E I +PR GS ++ P R+ PS Sbjct: 1204 PSSSTPRGGKDADGSLAKEEREPAIALAPRGGSLAPVKRPLPPPPGSSPRASHVPS 1259 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 42.4 bits (98), Expect = 0.002 Identities = 90/398 (22%), Positives = 120/398 (30%), Gaps = 59/398 (14%) Query: 21 KSGGGPGPSGSETPPPPRRAVLSPGSVFSPGRGASFLFPPAESLSPEEPRSPG------- 73 K G P P G PPP+ G PG+ PP P+ P PG Sbjct: 46 KPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--PPPQGGNKPQGPPPPGKPQGPPP 103 Query: 74 -GWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGTLSPPG-PEEAKRKL 131 G +S R S G G + P G Q G P G P K + Sbjct: 104 QGDKS--RSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 161 Query: 132 RILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSPRLGRARSPSPCPFRSSSQPPGRVL 191 Q + ++ G + + Q P P G+ + P P PP Sbjct: 162 PPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGPPPQGGNKPQGPPPPGK 220 Query: 192 VQGA------RSEERRTKSWGEQCPETSGTDS--------GRKGGPSLCSSQVKKGMPPL 237 QG +S+ R+ Q P G + G+ GP +G PP Sbjct: 221 PQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP- 279 Query: 238 PGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFG 297 PG+ P G QG S R + P P+ P + P PG P G Sbjct: 280 PGK--PQGPPPQGGSK-SRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG--- 333 Query: 298 ASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQGQFLGSETSPA 357 GP P P G ++ PP G P Sbjct: 334 ------------NKPQGPPPPGKPQGPPPQGGSKSRSARSPP-----------GKPQGPP 370 Query: 358 PERGGPRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEE 395 + G G PP G P P +G+P+ RP + Sbjct: 371 QQEGNNPQGPPPPAGGNPQQP-QAPPAGQPQGPPRPPQ 407 Score = 39.7 bits (91), Expect = 0.013 Identities = 73/315 (23%), Positives = 99/315 (31%), Gaps = 28/315 (8%) Query: 206 GEQCPETSGTDSGRKGGPSLCSSQVKKGMPPLPGR----AAPTGSEAQGPSAFVRMEKGI 261 G P+ + G+ GP +G PP PG+ G++ QGP + + Sbjct: 43 GGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 102 Query: 262 PASPRCGSPTAMEIDKRGSPTPGTRSCLAPSLGLFGASLTMATEVAARVTSTGPHRPQDL 321 P + SP + +G P G P GP P Sbjct: 103 PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPP---PPGKPQGPPPQGGNKPQGPPPPGKP 159 Query: 322 ALTEPSGRARELEDLQPPEALVERQGQFLGSETSPAPERGGPRDGEPPGKMGKGYLPCGM 381 P G + PP Q P P G P+ P G G P G Sbjct: 160 QGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG----GNKPQGP 215 Query: 382 PGSGEPEVGKRPEETTVSVQSAESSDSLSWSRLPRA-----LASVGPEEARSGAPVGGGR 436 P G+P+ G P+ S QSA S P+ P + + P GG + Sbjct: 216 PPPGKPQ-GPPPQGDNKS-QSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 273 Query: 437 WQLSDRVEGGSPTLGLLGGSPSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPG 496 Q G P G G P Q G+ + + P G+ P P + P PPG Sbjct: 274 PQ-------GPPPPGKPQG-PPPQGGSKSRSSRSPPGKPQGPPP--QGGNQPQGPPPPPG 323 Query: 497 DRVGVQPGNSRVWQG 511 G P QG Sbjct: 324 KPQGPPPQGGNKPQG 338 Score = 32.3 bits (72), Expect = 2.1 Identities = 66/269 (24%), Positives = 84/269 (31%), Gaps = 44/269 (16%) Query: 344 ERQGQFLGSETSPAPERGGPRDGEPPGKMGKGY--------------LPCGMPGSGEPEV 389 E + AP +GG + PP GK P G P P+ Sbjct: 26 EESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 85 Query: 390 GKRPEETTVSVQSAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPT 449 G +P+ + SR PR+ P G P GG ++ +G P Sbjct: 86 GNKPQGPPPPGKPQGPPPQGDKSRSPRS-----PPGKPQGPPPQGG-----NQPQGPPPP 135 Query: 450 LGLLGGSPSAQPGTGNVEAG-IPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPGNSRV 508 G G P P GN G P G+ P P D + + PPG G P Sbjct: 136 PGKPQGPP---PQGGNKPQGPPPPGKPQGPPPQGD--NKSRSSRSPPGKPQGPPPQGGNQ 190 Query: 509 WQGTMEKAGLAWTRGTGVQSEGTWESQRQDSDALPSPELLPQDPDKPFLRK---ACSPSN 565 QG G + G +G + Q P P PQ P K A SP Sbjct: 191 PQGPPPPPG----KPQGPPPQGGNKPQG------PPPPGKPQGPPPQGDNKSQSARSPPG 240 Query: 566 IPAVIITDMGTQEDGALEETQGSPRGNLP 594 P G Q G G P+G P Sbjct: 241 KPQGPPPQGGNQPQGP-PPPPGKPQGPPP 268 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.131 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,414,945 Number of Sequences: 37866 Number of extensions: 2856768 Number of successful extensions: 15674 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 731 Number of HSP's that attempted gapping in prelim test: 12380 Number of HSP's gapped (non-prelim): 3454 length of query: 946 length of database: 18,247,518 effective HSP length: 112 effective length of query: 834 effective length of database: 14,006,526 effective search space: 11681442684 effective search space used: 11681442684 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.