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Search of human proteins with 194248060
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194248060 outer dense fiber of sperm tails 1 [Homo sapiens]
(250 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194248060 outer dense fiber of sperm tails 1 [Homo sapiens] 555 e-158
gi|14917115 keratin 31 [Homo sapiens] 46 3e-05
gi|94538345 keratin 35 [Homo sapiens] 45 8e-05
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 44 1e-04
gi|4504517 heat shock protein beta-1 [Homo sapiens] 44 2e-04
gi|32483397 dopamine receptor D4 [Homo sapiens] 42 5e-04
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 41 9e-04
gi|148277620 type I hair keratin KA35 [Homo sapiens] 41 0.001
gi|116488398 keratin 32 [Homo sapiens] 41 0.001
gi|239753818 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239748381 PREDICTED: hypothetical protein XP_002346646 [Homo ... 40 0.001
gi|239742309 PREDICTED: hypothetical protein XP_002342482 [Homo ... 40 0.001
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 40 0.002
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 40 0.002
gi|60099478 keratin associated protein 5-6 [Homo sapiens] 40 0.002
gi|15431318 keratin 38 [Homo sapiens] 39 0.003
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 38 0.007
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 37 0.012
gi|7657146 heat shock 22kDa protein 8 [Homo sapiens] 36 0.028
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 36 0.036
gi|83582817 small proline-rich protein 2E [Homo sapiens] 36 0.036
gi|239755972 PREDICTED: similar to prostate collagen triple heli... 35 0.047
gi|239750495 PREDICTED: similar to prostate collagen triple heli... 35 0.047
gi|239744792 PREDICTED: hypothetical protein XP_002343272 [Homo ... 35 0.047
gi|209447093 prostate collagen triple helix isoform 2 [Homo sapi... 35 0.047
gi|62234340 prostate collagen triple helix isoform 1 [Homo sapiens] 35 0.047
gi|5174693 small proline-rich protein 2A [Homo sapiens] 35 0.047
gi|62955831 small proline-rich protein 2B [Homo sapiens] 35 0.061
gi|10337581 type I hair keratin 3B [Homo sapiens] 34 0.10
gi|5031905 MyoD family inhibitor [Homo sapiens] 34 0.14
>gi|194248060 outer dense fiber of sperm tails 1 [Homo sapiens]
Length = 250
Score = 555 bits (1429), Expect = e-158
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 1 MAALSCLLDSVRRDIKKVDRELRQLRCIDEFSTRCLCDLYMHPYCCCDLHPYPYCLCYSK 60
MAALSCLLDSVRRDIKKVDRELRQLRCIDEFSTRCLCDLYMHPYCCCDLHPYPYCLCYSK
Sbjct: 1 MAALSCLLDSVRRDIKKVDRELRQLRCIDEFSTRCLCDLYMHPYCCCDLHPYPYCLCYSK 60
Query: 61 RSRSCGLCDLYPCCLCDYKLYCLRPSLRSLERKAIRAIEDEKRELAKLRRTTNRILASSC 120
RSRSCGLCDLYPCCLCDYKLYCLRPSLRSLERKAIRAIEDEKRELAKLRRTTNRILASSC
Sbjct: 61 RSRSCGLCDLYPCCLCDYKLYCLRPSLRSLERKAIRAIEDEKRELAKLRRTTNRILASSC 120
Query: 121 CSSNILGSVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPPC 180
CSSNILGSVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPPC
Sbjct: 121 CSSNILGSVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPPC 180
Query: 181 VDEKDVTYSYGLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
VDEKDVTYSYGLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG
Sbjct: 181 VDEKDVTYSYGLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
Query: 241 SRFSCRKMIL 250
SRFSCRKMIL
Sbjct: 241 SRFSCRKMIL 250
>gi|14917115 keratin 31 [Homo sapiens]
Length = 416
Score = 46.2 bits (108), Expect = 3e-05
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 195 CVKIESPCYP---CTSPCSPC--SPCSPCNPCSPCNPCSPYDPCNPC 236
C +PC C+ P PC +PC+ C P +PC PC+P C PC
Sbjct: 365 CNLPSNPCATTNACSKPIGPCLSNPCTSCVPPAPCTPCAPRPRCGPC 411
Score = 40.8 bits (94), Expect = 0.001
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 194 SCVKIESPCY--PCTSPCSPCSPCSPCNPCSPCNPCSPY 230
+C K PC PCTS C P +PC+PC P C PC+ +
Sbjct: 377 ACSKPIGPCLSNPCTS-CVPPAPCTPCAPRPRCGPCNSF 414
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 205 CTSPCSPCSPCSPCN-PCSPC--NPCSPYDPCNPCYPCGSRFSC 245
C P +PC+ + C+ P PC NPC+ P PC PC R C
Sbjct: 365 CNLPSNPCATTNACSKPIGPCLSNPCTSCVPPAPCTPCAPRPRC 408
Score = 40.4 bits (93), Expect = 0.001
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 201 PCYPC--TSPCS-PCSPC--SPCNPCSPCNPCSPYDPCNPCYPCGS 241
P PC T+ CS P PC +PC C P PC+P P C PC S
Sbjct: 368 PSNPCATTNACSKPIGPCLSNPCTSCVPPAPCTPCAPRPRCGPCNS 413
>gi|94538345 keratin 35 [Homo sapiens]
Length = 455
Score = 44.7 bits (104), Expect = 8e-05
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 201 PCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNP---CYPC-GSRF 243
PC PC SP C PC P + C P + C+P C PC G RF
Sbjct: 409 PCNPCAPDYSPSKSCLPCLPAASCGPSAARTNCSPRPICVPCPGGRF 455
Score = 32.3 bits (72), Expect = 0.40
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 211 PCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRFSC 245
PC+PC+P SP C P P C P +R +C
Sbjct: 409 PCNPCAP--DYSPSKSCLPCLPAASCGPSAARTNC 441
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 44.3 bits (103), Expect = 1e-04
Identities = 37/133 (27%), Positives = 42/133 (31%), Gaps = 14/133 (10%)
Query: 120 CCSSNILGSVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPP 179
CC + V C K G+ + + C GSK C
Sbjct: 33 CCCKPVCCCVPACSCSSCGSCGGSKGGRGSCGGSKGDCGSCGGSK-----GGCGSCGCSQ 87
Query: 180 CVDEKDVTYSYGLGSCVKIESPCYPCTSPCSPCSPCSPCNPC-------SPCNPCSPYDP 232
C K S G GS S C PC S S C PCS + C S C PC
Sbjct: 88 CSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQSS 147
Query: 233 CNPCYPCGSRFSC 245
C C PC C
Sbjct: 148 C--CKPCCCSSGC 158
Score = 32.3 bits (72), Expect = 0.40
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 200 SPCYPCTSPCSPC--SPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
S C C S C C S C P C P C P C+ C CG
Sbjct: 12 SGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCG 54
Score = 30.0 bits (66), Expect = 2.0
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 17/83 (20%)
Query: 172 CKEFSLPPCVDE----KDVTYSYGLGS----------CVKIESPCYPCTSPCSPCSPCSP 217
C+ PC + K + S G GS C S C PC S C
Sbjct: 105 CQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQ 164
Query: 218 CNPCSPCNPCSPYDPCNP-CYPC 239
+ C PC CS C P C C
Sbjct: 165 SSCCKPC--CSQSSCCVPICCQC 185
Score = 28.9 bits (63), Expect = 4.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 205 CTSPCSPC-SPCSPCNP--CSPCNPCSPYDPCNPCYPCGSRFSC 245
C S C C S C C C P C P C P C S SC
Sbjct: 10 CGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSC 53
>gi|4504517 heat shock protein beta-1 [Homo sapiens]
Length = 205
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 128 SVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNIC--KEFSLPPCVDEKD 185
S++V F PD++ V+ KDG V ++ + E R D ++ Y++ C ++++LPP VD
Sbjct: 98 SLDVNHFAPDELTVKTKDGVVEITGKHEERQD-----EHGYISRCFTRKYTLPPGVDPTQ 152
Query: 186 VTYSYGLGSCVKIESP 201
V+ S + +E+P
Sbjct: 153 VSSSLSPEGTLTVEAP 168
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 42.0 bits (97), Expect = 5e-04
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 199 ESPCYPCTSPCSPCSPCSPCNP-CSPCNPCSPYDPCNP-CYP 238
+ PC P +P +P P PC P C+P P P DPC P C P
Sbjct: 255 QDPCGPDCAPPAPGLPRGPCGPDCAPAAPSLPQDPCGPDCAP 296
Score = 38.9 bits (89), Expect = 0.004
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 201 PCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGS 241
P PC C+P +P P +PC P C+P P P PCGS
Sbjct: 270 PRGPCGPDCAPAAPSLPQDPCGP--DCAPPAPGLPPDPCGS 308
Score = 37.7 bits (86), Expect = 0.009
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 201 PCYPCTSPCSPCSPCSPCNPCSP-CNPCSPYDPCNPCYP 238
P PC C+P +P P PC P C P +P P +PC P
Sbjct: 254 PQDPCGPDCAPPAPGLPRGPCGPDCAPAAPSLPQDPCGP 292
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 41.2 bits (95), Expect = 9e-04
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 191 GLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPC 236
G GSC + C C CS C+ C PC S C C CNPC
Sbjct: 123 GCGSCGGSKGGCGSCG--CSQCNCCKPCCCSSGCGSCCQSSCCNPC 166
Score = 30.0 bits (66), Expect = 2.0
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Query: 191 GLGS-CVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
G GS C S C C S C C P C P C P C+ C CG
Sbjct: 23 GCGSGCGGYGSGCGGCGSSC-----CVPVCCCKPVCCCVPACSCSSCGSCG 68
Score = 29.6 bits (65), Expect = 2.6
Identities = 25/63 (39%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 189 SYGLGS-CVKIESPCYPCTSPC----SPCSPC-SPCNPCSPCNPCSPYDPCNPCYPCGSR 242
S G GS C S C C S C S C C S C C P C P C P C S
Sbjct: 7 SGGCGSGCGGCGSGCGGCGSGCGGYGSGCGGCGSSC--CVPVCCCKPVCCCVPACSCSSC 64
Query: 243 FSC 245
SC
Sbjct: 65 GSC 67
Score = 28.1 bits (61), Expect = 7.5
Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 21/75 (28%)
Query: 162 GSKKYSYMNICKEFSLPPCVDEKDVTYSYGLGSCVKIESPCYPCTSPCSPC-------SP 214
GS S N CK PC S G GSC + S C PC S C S
Sbjct: 135 GSCGCSQCNCCK-----PCC------CSSGCGSCCQ-SSCCNPCCCQSSCCVPVCCQSSC 182
Query: 215 CSPCNPCSPCNPCSP 229
C PC C + C P
Sbjct: 183 CKPC--CCQSSCCVP 195
>gi|148277620 type I hair keratin KA35 [Homo sapiens]
Length = 491
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 32/149 (21%)
Query: 120 CCSSNILG---SVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYM-NICKEF 175
CC I+ SVN E Q + R++D + C+ E E RY L ++ S + N+ +
Sbjct: 307 CCQKEIIELRRSVNTLEVEL-QAQHRMRDSQECILTETEARYTALLTQIQSLIDNLEAQL 365
Query: 176 SLPPCVDEK-----------------DVTYSYGLGSCVKIESPCYPCTSPCSPCSPCSPC 218
+ C E+ ++T L + PCYP + C P SP + C
Sbjct: 366 AEIRCALERQNQEYEILLDVKSRLECEITTYRSLLESSDGKRPCYPRATKCEP-SPWTSC 424
Query: 219 NP---------CSPCNPCSPYDPCNPCYP 238
C+ +PCS + C+ C P
Sbjct: 425 KSGAIESTAPACTSSSPCSLKEHCSACGP 453
Score = 27.7 bits (60), Expect = 9.8
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 205 CTSPCSPCSPCSPCNPCSPCNPCSPYDPCNP-------CYPCG 240
CT+ SP +PC C+ + + S + C+P C P G
Sbjct: 6 CTTTNSPSTPCQNCSRITNVSTISSNNGCHPGGLTVNNCQPAG 48
>gi|116488398 keratin 32 [Homo sapiens]
Length = 448
Score = 40.8 bits (94), Expect = 0.001
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 201 PCYPCTSP-CSPCSPCSPCNPCSPCNPCSPYDPCNPC 236
PC PC++P C+ C P SPC P + C P + PC+PC
Sbjct: 408 PCNPCSTPSCTTCVP-SPCVPRTVCVPRTVGMPCSPC 443
Score = 37.4 bits (85), Expect = 0.012
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 205 CTSPCSPCS--PCSPC--NPCSPCNPCSPYDPCNPCYPC 239
C PC+PCS C+ C +PC P C P PC PC
Sbjct: 405 CKLPCNPCSTPSCTTCVPSPCVPRTVCVPRTVGMPCSPC 443
>gi|239753818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYP 238
SP SPCSP SP P P P SP+ P P P
Sbjct: 20 SPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGP 51
Score = 39.3 bits (90), Expect = 0.003
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 200 SPCYPCT-----SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SPC P + P P SP SP P P P SP+ P +P P G
Sbjct: 23 SPCSPLSPFGPGGPIGPTSPFSPSGPMGPFFPVSPWSPFSPARPSG 68
Score = 38.1 bits (87), Expect = 0.007
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
+P SP SPCSP +P P P P P +P P G F
Sbjct: 17 TPGSPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGPFF 53
>gi|239748381 PREDICTED: hypothetical protein XP_002346646 [Homo
sapiens]
Length = 148
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYP 238
SP SPCSP SP P P P SP+ P P P
Sbjct: 20 SPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGP 51
Score = 39.3 bits (90), Expect = 0.003
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 200 SPCYPCT-----SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SPC P + P P SP SP P P P SP+ P +P P G
Sbjct: 23 SPCSPLSPFGPGGPIGPTSPFSPSGPMGPFFPVSPWSPFSPARPSG 68
Score = 38.1 bits (87), Expect = 0.007
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
+P SP SPCSP +P P P P P +P P G F
Sbjct: 17 TPGSPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGPFF 53
>gi|239742309 PREDICTED: hypothetical protein XP_002342482 [Homo
sapiens]
Length = 148
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYP 238
SP SPCSP SP P P P SP+ P P P
Sbjct: 20 SPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGP 51
Score = 39.3 bits (90), Expect = 0.003
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 200 SPCYPCT-----SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SPC P + P P SP SP P P P SP+ P +P P G
Sbjct: 23 SPCSPLSPFGPGGPIGPTSPFSPSGPMGPFFPVSPWSPFSPARPSG 68
Score = 38.1 bits (87), Expect = 0.007
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
+P SP SPCSP +P P P P P +P P G F
Sbjct: 17 TPGSPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGPFF 53
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 40.0 bits (92), Expect = 0.002
Identities = 44/143 (30%), Positives = 48/143 (33%), Gaps = 31/143 (21%)
Query: 120 CCSSNIL---GSVNVCGFEPDQVKVRVKDG-------KVCVSAERENRYDCLGS---KKY 166
CCSS+ GS VCGF G K C + C S
Sbjct: 96 CCSSSCGSCGGSKGVCGFRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPSC 155
Query: 167 SYMNICKEFSLPPCVDE----KDVTYSYGLGSCVKIESPCYPCTSPCSPCSPC------- 215
S + CK PC + K S G GS S C PC S S C PC
Sbjct: 156 SQSSCCK-----PCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCG 210
Query: 216 SPCNPCSPCNPCSPYDPCNPCYP 238
S C S C PCS C C P
Sbjct: 211 SSCCQSSCCKPCSSQSSC--CVP 231
Score = 37.4 bits (85), Expect = 0.012
Identities = 26/78 (33%), Positives = 26/78 (33%), Gaps = 13/78 (16%)
Query: 179 PCVDEKDVTYSYGLGSCVKIE----SPCYPCTSPCSPCSPC-------SPCNPCSPCNPC 227
PC S SC K S C PC S S C PC S C S C PC
Sbjct: 134 PCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPC 193
Query: 228 SPYDPCNPCYPCGSRFSC 245
C C PC C
Sbjct: 194 CSQSSC--CKPCCCSSGC 209
Score = 29.6 bits (65), Expect = 2.6
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 9/50 (18%)
Query: 200 SPCYPCTSPCSPCSP---------CSPCNPCSPCNPCSPYDPCNPCYPCG 240
S C C S C C C P C P C P C+ C CG
Sbjct: 12 SSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGSCG 61
Score = 28.5 bits (62), Expect = 5.8
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 19/69 (27%)
Query: 191 GLGSCVKIE-----SPCYP--CTSPCSPCSPCSP-----------CNPCSPCNPCSPYDP 232
G GSC + S C P C+S C C C C C+ CS Y P
Sbjct: 76 GCGSCGGSKGGCGSSCCVPVCCSSSCGSCGGSKGVCGFRGGSKGGCGSCG-CSQCSCYKP 134
Query: 233 CNPCYPCGS 241
C CGS
Sbjct: 135 CCCSSGCGS 143
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 40.0 bits (92), Expect = 0.002
Identities = 34/111 (30%), Positives = 36/111 (32%), Gaps = 19/111 (17%)
Query: 149 CVSAERENRYDCLGSKKYSYMNICKEFSLPPCVDEKDVTYSYGLGSCVKIESPCYPCTSP 208
C S + C GSK C C K S G GS S C P S
Sbjct: 54 CSSCGKRGCGSCGGSK-----GGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQ 108
Query: 209 CSPCSPC-------SPCNPCSPCNPCSPYDPCNP-------CYPCGSRFSC 245
CS C PC S C S C PC C C PC S+ C
Sbjct: 109 CSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRC 159
Score = 34.3 bits (77), Expect = 0.10
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 172 CKEFSLPPCVDEKDVTYSYGLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYD 231
CK + C K S G GS S C PC S S C + C PC CS
Sbjct: 102 CKPYC-SQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPC--CSQSR 158
Query: 232 PCNP-CYPC 239
C P CY C
Sbjct: 159 CCVPVCYQC 167
Score = 29.3 bits (64), Expect = 3.4
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 14/63 (22%)
Query: 194 SCVKIESPCYPCTSPCSPCSP--CSP---------CNPCSPCNPCSPYDPCNPCYPCGSR 242
SC +S C C S C C P C+P C P C+ C C C GS+
Sbjct: 13 SCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRG-CGSC--GGSK 69
Query: 243 FSC 245
C
Sbjct: 70 GGC 72
>gi|60099478 keratin associated protein 5-6 [Homo sapiens]
Length = 129
Score = 39.7 bits (91), Expect = 0.002
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 191 GLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRFSC 245
G GSC + C C CS CS C PC S C C C PC S+ SC
Sbjct: 69 GCGSCGGSKGGCGSCG--CSQCSCCKPCYCSSGCGSSCCQSSC--CKPCCSQASC 119
Score = 33.9 bits (76), Expect = 0.14
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 200 SPCYPCTSPCSPC--SPCSPCNPCSPCNPCSPYDPCNPCYPCGSRFSC 245
S C C S C C S C P C P C P C C CG C
Sbjct: 12 SGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCTSCGSCGGSKGC 59
Score = 28.1 bits (61), Expect = 7.5
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Query: 191 GLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
G G C S C P C P C P C+ C C C C CG
Sbjct: 20 GCGGCGS--SCCVPICC-CKPVCCCVPACSCTSCGSCGGSKGC--CGSCG 64
>gi|15431318 keratin 38 [Homo sapiens]
Length = 456
Score = 39.3 bits (90), Expect = 0.003
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Query: 76 CDYKLYCLRPSLRSLERKAIRAIEDEKRELAKLRRTTNRILASSCCSSNILGSVNVCGFE 135
C +L C + + L R + A+E E++ + T L +S C + + +
Sbjct: 309 CSEELQCCQSEILEL-RCTVNALEVERQA----QHTLKDCLQNSLCEAEDRFGTELAQMQ 363
Query: 136 PDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPPCVDEKDVTYSYGLGSC 195
V + ++ ER+N+ +Y + + ++ + TY L S
Sbjct: 364 SLISNVEEQLSEIRADLERQNQ-------EYQVL-----LDVKTRLENEIATYRNLLES- 410
Query: 196 VKIESPCYPC-TSPCSPCSPCSPCNPCSPCNPCSP 229
+ PC PC TSP +PC+P C PC C P
Sbjct: 411 EDCKLPCNPCSTSPSCVTAPCAPRPSCGPCTTCGP 445
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 38.1 bits (87), Expect = 0.007
Identities = 25/74 (33%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Query: 172 CKEFSLPPCVDEKDVTYSYGLGSCVKIESPCYPCTSPCSPCSPC-------SPCNPCSPC 224
C C K S G GS S C PC S C PC S C S C
Sbjct: 87 CGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQSSCC 146
Query: 225 NPCSPYDPCNPCYP 238
NPC C C P
Sbjct: 147 NPCCSQSSC--CVP 158
Score = 34.7 bits (78), Expect = 0.080
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 189 SYGLGS-CVKIESPCYPCTSPCSPC--SPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
S G GS C S C C S C C S C P C P C P C+ C CG
Sbjct: 7 SEGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCG 61
Score = 32.0 bits (71), Expect = 0.52
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 193 GSCVKIESPCYPCTSPCSPCSPCSP----CNPCSPCNPCSPYDPCNPCYPCGS 241
GSC + C C C C C C C+ CS Y PC CGS
Sbjct: 58 GSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCG-CSQCSCYKPCCCSSGCGS 109
Score = 31.2 bits (69), Expect = 0.89
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 200 SPCYPCTSPCSPC-SPCSPCNP--CSPCNPCSPYDPCNPCYPCGSRFSC 245
S C C S C C S C C C P C P C P C S SC
Sbjct: 12 SGCGGCGSGCGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSC 60
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 37.4 bits (85), Expect = 0.012
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 205 CTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRFSC 245
C S CS CS C PC S C C C PC S+ SC
Sbjct: 230 CGSSCSQCSCCKPCCCSSGCGSSCCQSSC--CKPCCSQSSC 268
Score = 34.3 bits (77), Expect = 0.10
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 9/53 (16%)
Query: 193 GSCVKIESPCYPCTSPCSPCSPC-------SPCNPCSPCNPCSPYDPCNPCYP 238
GSC + C S CS C PC S C S C PC C C P
Sbjct: 221 GSCAGSKGGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSC--CVP 271
Score = 27.7 bits (60), Expect = 9.8
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 11/62 (17%)
Query: 191 GLGSCVKIESPCYPCT-------SPCSPC--SPCSPCNPCSPCNPCSPYDPCNPCYP--C 239
G GSC + C C S C C S C P C P C P C+ C C
Sbjct: 98 GCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGC 157
Query: 240 GS 241
GS
Sbjct: 158 GS 159
>gi|7657146 heat shock 22kDa protein 8 [Homo sapiens]
Length = 196
Score = 36.2 bits (82), Expect = 0.028
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 129 VNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPPCVDEKDVTY 188
VNV F+P+++ V+ KDG V VS + E + G N K+ LP VD V
Sbjct: 100 VNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVS---KNFTKKIQLPAEVDPVTVFA 156
Query: 189 SYGLGSCVKIESPCYP 204
S + IE+P P
Sbjct: 157 SLSPEGLLIIEAPQVP 172
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 35.8 bits (81), Expect = 0.036
Identities = 28/88 (31%), Positives = 29/88 (32%), Gaps = 14/88 (15%)
Query: 172 CKEFSLPPCVDEKDVTYSYGLGSCVKIESPCYPCT------SPCSPCSPCSP-CNPCSPC 224
C C K S G GS S C PC S C S C P C S C
Sbjct: 191 CGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCC 250
Query: 225 NPCSPYDPCNP-------CYPCGSRFSC 245
PC C C PC S+ SC
Sbjct: 251 KPCCSSSGCGSSCCQSSCCNPCCSQSSC 278
Score = 33.9 bits (76), Expect = 0.14
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 191 GLGSCVKIESPCYPCTSPCSPC--SPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
G G C S C C S C C S C P C P C P C+ C CG
Sbjct: 27 GCGGC---GSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCG 75
Score = 32.7 bits (73), Expect = 0.30
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 191 GLGSCVKIESPCYPCTSPCSPC-SPCSPCNP--CSPCNPCSPYDPCNPCYPCGSRFSC 245
G G C S C C S C C S C C C P C P C P C S SC
Sbjct: 20 GCGGC---GSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSC 74
Score = 32.0 bits (71), Expect = 0.52
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 15/70 (21%)
Query: 191 GLGSCVKIE-SPCYPCT------SPCSPCSPCSPCNPCSPC-NPCSPYDPCNP------- 235
G GSC + S C PC S C S C PC S C + C C P
Sbjct: 190 GCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSC 249
Query: 236 CYPCGSRFSC 245
C PC S C
Sbjct: 250 CKPCCSSSGC 259
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 35.8 bits (81), Expect = 0.036
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 197 KIESPCYP--CTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYP 238
K PC P C PC P PC P C P P PC P
Sbjct: 22 KCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQKCPPVTPSPPCQP 65
Score = 32.7 bits (73), Expect = 0.30
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 197 KIESPCYP--CTSPCSPCSPCSPCNPCSPCNPCSPYDP 232
K PC P C PC P C P +P PC P P
Sbjct: 31 KCPEPCPPPKCPQPCPPQQCQQKCPPVTPSPPCQPKCP 68
Score = 28.5 bits (62), Expect = 5.8
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 6/47 (12%)
Query: 205 CTSPCSPCSPC------SPCNPCSPCNPCSPYDPCNPCYPCGSRFSC 245
C PC P C PC P PC P PC P + C
Sbjct: 8 CKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQKC 54
>gi|239755972 PREDICTED: similar to prostate collagen triple helix
[Homo sapiens]
Length = 116
Score = 35.4 bits (80), Expect = 0.047
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
SP P SP SP P P P SP+ P P P G F
Sbjct: 43 SPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGF 79
Score = 31.6 bits (70), Expect = 0.68
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSR 242
SP P P +P SP P P SP P P P P P G +
Sbjct: 52 SPFQPLI-PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 93
Score = 30.0 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Query: 208 PCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
P P SP P P P P P P P P G
Sbjct: 68 PVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
Score = 29.3 bits (64), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P SP P P P P P P P P P G
Sbjct: 64 SPWGP-VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
Score = 28.1 bits (61), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P P P P P P P P P G
Sbjct: 73 SPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
>gi|239750495 PREDICTED: similar to prostate collagen triple helix
[Homo sapiens]
Length = 116
Score = 35.4 bits (80), Expect = 0.047
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
SP P SP SP P P P SP+ P P P G F
Sbjct: 43 SPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGF 79
Score = 31.6 bits (70), Expect = 0.68
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSR 242
SP P P +P SP P P SP P P P P P G +
Sbjct: 52 SPFQPLI-PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 93
Score = 30.0 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Query: 208 PCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
P P SP P P P P P P P P G
Sbjct: 68 PVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
Score = 29.3 bits (64), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P SP P P P P P P P P P G
Sbjct: 64 SPWGP-VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
Score = 28.1 bits (61), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P P P P P P P P P G
Sbjct: 73 SPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
>gi|239744792 PREDICTED: hypothetical protein XP_002343272 [Homo
sapiens]
Length = 116
Score = 35.4 bits (80), Expect = 0.047
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
SP P SP SP P P P SP+ P P P G F
Sbjct: 43 SPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGF 79
Score = 31.6 bits (70), Expect = 0.68
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSR 242
SP P P +P SP P P SP P P P P P G +
Sbjct: 52 SPFQPLI-PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 93
Score = 30.0 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Query: 208 PCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
P P SP P P P P P P P P G
Sbjct: 68 PVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
Score = 29.3 bits (64), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P SP P P P P P P P P P G
Sbjct: 64 SPWGP-VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
Score = 28.1 bits (61), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P P P P P P P P P G
Sbjct: 73 SPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
>gi|209447093 prostate collagen triple helix isoform 2 [Homo
sapiens]
Length = 116
Score = 35.4 bits (80), Expect = 0.047
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
SP P SP SP P P P SP+ P P P G F
Sbjct: 43 SPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGF 79
Score = 31.6 bits (70), Expect = 0.68
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSR 242
SP P P +P SP P P SP P P P P P G +
Sbjct: 52 SPFQPLI-PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 93
Score = 30.0 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Query: 208 PCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
P P SP P P P P P P P P G
Sbjct: 68 PVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
Score = 29.3 bits (64), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P SP P P P P P P P P P G
Sbjct: 64 SPWGP-VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
Score = 28.1 bits (61), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P P P P P P P P P G
Sbjct: 73 SPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
>gi|62234340 prostate collagen triple helix isoform 1 [Homo sapiens]
Length = 107
Score = 35.4 bits (80), Expect = 0.047
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSRF 243
SP P SP SP P P P SP+ P P P G F
Sbjct: 34 SPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGF 70
Score = 31.6 bits (70), Expect = 0.68
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCGSR 242
SP P P +P SP P P SP P P P P P G +
Sbjct: 43 SPFQPLI-PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 84
Score = 30.0 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Query: 208 PCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
P P SP P P P P P P P P G
Sbjct: 59 PVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 91
Score = 29.3 bits (64), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 200 SPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P SP P P P P P P P P P G
Sbjct: 55 SPWGP-VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 94
Score = 28.1 bits (61), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Query: 207 SPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG 240
SP P P P P P P P P P P G
Sbjct: 64 SPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 97
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 35.4 bits (80), Expect = 0.047
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 14/59 (23%)
Query: 199 ESPCYP--------CTSPCSPCSPCSPCNPCSPCNPCSP------YDPCNPCYPCGSRF 243
+ PC P C PC P PC P PC P Y P P PC S++
Sbjct: 9 KQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQKYPPVTPSPPCQSKY 67
Score = 32.0 bits (71), Expect = 0.52
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 197 KIESPCYP--CTSPCSPCSPCSPCNPCSPCN----PCSPYDPCNPCYPCGSR 242
K PC P C PC P PC P C P +P PC YP S+
Sbjct: 22 KCPEPCPPPKCPEPCPPPKCPQPCPP-QQCQQKYPPVTPSPPCQSKYPPKSK 72
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 35.0 bits (79), Expect = 0.061
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 197 KIESPCYP--CTSPCSPCSPCSPCNPCSPCN----PCSPYDPCNPCYPCGSR 242
K PC P C PC P PC P C P +P PC P YP S+
Sbjct: 22 KCPEPCPPPKCPEPCPPPKCPQPCPP-QQCQQKYPPVTPSPPCQPKYPPKSK 72
Score = 33.5 bits (75), Expect = 0.18
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 14/59 (23%)
Query: 199 ESPCYP--------CTSPCSPCSPCSPCNPCSPCNPCSP------YDPCNPCYPCGSRF 243
+ PC P C PC P PC P PC P Y P P PC ++
Sbjct: 9 KQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQKYPPVTPSPPCQPKY 67
Score = 28.1 bits (61), Expect = 7.5
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 6/40 (15%)
Query: 205 CTSPCSPCSPC------SPCNPCSPCNPCSPYDPCNPCYP 238
C PC P C PC P PC P PC P
Sbjct: 8 CKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPP 47
>gi|10337581 type I hair keratin 3B [Homo sapiens]
Length = 404
Score = 34.3 bits (77), Expect = 0.10
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 205 CTSPCSPCSPCSPCN-PCSPC--NPCSPYDPCNPCYPCG 240
C P +PC+ + C P C NPC P C PC G
Sbjct: 365 CKLPSNPCATTNACEKPIGSCVTNPCGPRSRCGPCNTFG 403
>gi|5031905 MyoD family inhibitor [Homo sapiens]
Length = 246
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 199 ESPCYPCTSPCSPCSPCSPCN---PCSPCNPCSPYDPCNPCYPCGS 241
E C C C C + CN C+ C CS D C C CGS
Sbjct: 161 EDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCLCCCCCGS 206
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.140 0.492
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,091,917
Number of Sequences: 37866
Number of extensions: 552596
Number of successful extensions: 3805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 2944
Number of HSP's gapped (non-prelim): 544
length of query: 250
length of database: 18,247,518
effective HSP length: 100
effective length of query: 150
effective length of database: 14,460,918
effective search space: 2169137700
effective search space used: 2169137700
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.