Search of human proteins with 194239678

Search of human proteins with 194239678

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194239678 tubulin tyrosine ligase-like family, member 10
isoform 2 [Homo sapiens]
         (404 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194239678 tubulin tyrosine ligase-like family, member 10 isof...   842   0.0  
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof...   819   0.0  
gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo ...    81   1e-15
gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo ...    78   1e-14
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ...    75   1e-13
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo...    66   5e-11
gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo...    66   5e-11
gi|195963418 tubulin tyrosine ligase-like family, member 6 isofo...    64   2e-10
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo...    63   4e-10
gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo...    63   5e-10
gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo ...    54   3e-07
gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo ...    51   2e-06
gi|24308516 tubulin tyrosine ligase [Homo sapiens]                     49   8e-06
gi|212720861 tubulin tyrosine ligase-like family, member 11 a [H...    47   4e-05
gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Ho...    47   4e-05
gi|12707580 paired-like homeobox 2b [Homo sapiens]                     33   0.60 
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                33   0.60 
gi|239753606 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239748180 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239742074 PREDICTED: hypothetical protein XP_002342429 [Homo ...    32   1.3  
gi|119508426 alpha 3 type IX collagen [Homo sapiens]                   32   1.3  
gi|17402888 neuronal pentraxin receptor [Homo sapiens]                 31   2.3  
gi|121114296 caudal type homeobox 1 [Homo sapiens]                     31   2.3  
gi|91208420 bassoon protein [Homo sapiens]                             30   3.0  
gi|194097332 ephrin receptor EphB6 precursor [Homo sapiens]            30   3.0  
gi|5803066 leukocyte immunoglobulin-like receptor, subfamily A (...    30   3.0  
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      30   3.9  
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    30   3.9  
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    30   3.9  
gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo ...    30   5.1  

>gi|194239678 tubulin tyrosine ligase-like family, member 10 isoform
           2 [Homo sapiens]
          Length = 404

 Score =  842 bits (2176), Expect = 0.0
 Identities = 404/404 (100%), Positives = 404/404 (100%)

Query: 1   MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGP 60
           MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGP
Sbjct: 1   MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGP 60

Query: 61  SAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLK 120
           SAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLK
Sbjct: 61  SAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLK 120

Query: 121 WCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGVQARL 180
           WCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGVQARL
Sbjct: 121 WCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGVQARL 180

Query: 181 EKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKHEREAFFTLFDETQIWICK 240
           EKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKHEREAFFTLFDETQIWICK
Sbjct: 181 EKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKHEREAFFTLFDETQIWICK 240

Query: 241 PTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDG 300
           PTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDG
Sbjct: 241 PTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDG 300

Query: 301 RKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLK 360
           RKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLK
Sbjct: 301 RKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLK 360

Query: 361 EHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKVRPLCPPVWE 404
           EHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKVRPLCPPVWE
Sbjct: 361 EHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKVRPLCPPVWE 404


>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
           1 [Homo sapiens]
          Length = 673

 Score =  819 bits (2116), Expect = 0.0
 Identities = 395/396 (99%), Positives = 395/396 (99%)

Query: 1   MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGP 60
           MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGP
Sbjct: 74  MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGP 133

Query: 61  SAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLK 120
           SAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLK
Sbjct: 134 SAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLK 193

Query: 121 WCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGVQARL 180
           WCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGVQARL
Sbjct: 194 WCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGVQARL 253

Query: 181 EKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKHEREAFFTLFDETQIWICK 240
           EKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKHEREAFFTLFDETQIWICK
Sbjct: 254 EKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKHEREAFFTLFDETQIWICK 313

Query: 241 PTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDG 300
           PTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDG
Sbjct: 314 PTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDG 373

Query: 301 RKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLK 360
           RKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLK
Sbjct: 374 RKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLK 433

Query: 361 EHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKVR 396
           EHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLK R
Sbjct: 434 EHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKKR 469


>gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo
           sapiens]
          Length = 423

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 58/300 (19%)

Query: 95  TIISSYCKSKGWQRIHDSRRDDYTLKWCEVKSRDSYGSFREG-----EQLLYQLPNNKLL 149
           +++ +  + +GW ++ ++  +D+   W  V++  +  S   G     +Q++   PN+  L
Sbjct: 14  SVLINNFEKRGWVQVTEN--EDWNFYWMSVQTIRNVFSVEAGYRLSDDQIVNHFPNHYEL 71

Query: 150 TTKIGLLSTLRGRARAMSKASKVPGGVQARLEKDAAAPALEDLPWTSPGYLRPQRVLRME 209
           T K  ++  ++   + + K            EKD     L         YL         
Sbjct: 72  TRKDLMVKNIKRYRKELEKEGS------PLAEKDENGKYL---------YL--------- 107

Query: 210 EFFPETYRLDLKHEREAFFTLFDE------TQIWICKPTASNQGKGIFLLRNQEEVA--A 261
           +F P TY L       A + LF E      +  WI KP    QGKGIFL+    ++   +
Sbjct: 108 DFVPVTYMLP------ADYNLFVEEFRKSPSSTWIMKPCGKAQGKGIFLINKLSQIKKWS 161

Query: 262 LQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIF- 320
             +KT S               +A V+  YI NPLL+ GRKFD+R Y+L++   P   + 
Sbjct: 162 RDSKTSSFVSQS--------NKEAYVISLYINNPLLIGGRKFDLRLYVLVSTYRPLRCYM 213

Query: 321 FGHGYARLTLSLYDPHSSDLGG---HLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYISDT 377
           +  G+ R     Y P +S+L     HLTN  +QK    Y  +     W++ +L  Y+  T
Sbjct: 214 YKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKHGEDYNHI-HGGKWTVSNLRLYLEST 272


>gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo
           sapiens]
          Length = 439

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 31/172 (18%)

Query: 210 EFFPETYRLDLKHEREAFFTLFDETQ--IWICKPTASNQGKGIFLLRNQEEVAALQAKTR 267
           +FFP+T+ +  ++    F   F +     WI KP A +QGKGIFL R  +++   +  TR
Sbjct: 137 DFFPKTFEMPCEYH--LFVEEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTR 194

Query: 268 SMEDD----PIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGH 323
           S +D     P+ +          V QRYI+NP L+ GRKFD+R Y+L+       + +  
Sbjct: 195 SSDDQKDDIPVENY---------VAQRYIENPYLIGGRKFDLRVYVLVMSVFAECLLWS- 244

Query: 324 GYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYIS 375
           G+ R  +            HLTN  +QK SP Y   K+   W+++   +Y++
Sbjct: 245 GHRRQDV------------HLTNVAVQKTSPDYH-PKKGCKWTLQRFRQYLA 283


>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
           sapiens]
          Length = 1281

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 31/148 (20%)

Query: 237 WICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPL 296
           WI KP AS++G+G++L+ N  ++        S+E++ +             V RYI NPL
Sbjct: 177 WIVKPVASSRGRGVYLINNPNQI--------SLEENIL-------------VSRYINNPL 215

Query: 297 LVDGRKFDVRSYLLIACTTPYMIF-FGHGYARLTLSLYDPHSSDLGG---HLTNQFMQKK 352
           L+D  KFDVR Y+L+    P +I+ +  G AR     YD  + ++     HLTN  + KK
Sbjct: 216 LIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKK 275

Query: 353 SPLYMLLKEHTV------WSMEHLNRYI 374
           S  Y+   +  V      WSM  + RY+
Sbjct: 276 SGDYVSCDDPEVEDYGNKWSMSAMLRYL 303


>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
           sapiens]
          Length = 1199

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 41/196 (20%)

Query: 211 FFPETYRL--DLKHEREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRS 268
           FFP+++ L  D K  R+A+ +     Q WI KP AS +G GI ++    ++         
Sbjct: 692 FFPQSFILPQDAKLLRKAWES--SSRQKWIVKPPASARGIGIQVIHKWSQL--------- 740

Query: 269 MEDDPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIF-FGHGYAR 327
                     P R P   +VQRY+  P L+ G KFD+R Y+ +    P  I+ F  G  R
Sbjct: 741 ----------PKRRPL--LVQRYLHKPYLISGSKFDLRIYVYVTSYDPLRIYLFSDGLVR 788

Query: 328 LTLSLYDPHSSDLGG---HLTNQFMQKKSPLY------MLLKEHTVWSMEHLNRYISDTF 378
                Y P    LG    HLTN  + KK+  Y      M  + H  W+++ L  Y+S   
Sbjct: 789 FASCKYSPSMKSLGNKFMHLTNYSVNKKNAEYQANADEMACQGHK-WALKALWNYLSQ-- 845

Query: 379 WKARGLAKDWVFTTLK 394
              +G+  D ++  +K
Sbjct: 846 ---KGVNSDAIWEKIK 858


>gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo
           sapiens]
          Length = 459

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 35/172 (20%)

Query: 212 FPETYRLDLKHEREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMED 271
           FP T+ L   +     +    + + +ICKP +  QG+GIF+ RN  E+            
Sbjct: 174 FPRTWCLPADYGDFQSYGRQRKARTYICKPDSGCQGRGIFITRNPREIK----------- 222

Query: 272 DPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIF-FGHGYARLTL 330
            P  H          + Q+YI  PLL+DG KFD+R Y+LI    P  IF +  G AR   
Sbjct: 223 -PGEHM---------ICQQYISKPLLIDGFKFDMRVYVLITSCDPLRIFTYEEGLARFAT 272

Query: 331 SLY-DPHSSDLGG---HLTNQFMQKKSPLYM---------LLKEHTVWSMEH 369
           + Y +P  ++L     HLTN  + K +  ++          L    +W  EH
Sbjct: 273 TPYMEPSHNNLDNVCMHLTNYAINKHNENFVRDGAVGSKRKLSTLNIWLQEH 324


>gi|195963418 tubulin tyrosine ligase-like family, member 6 isoform
           1 [Homo sapiens]
          Length = 891

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 26/148 (17%)

Query: 211 FFPETYRLDLKHEREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSME 270
           FFP T+ L         ++   + + +ICKP +  QGKGIF+ R  +E+           
Sbjct: 194 FFPRTWCLPADWGDLQTYSRSRKNKTYICKPDSGCQGKGIFITRTVKEI----------- 242

Query: 271 DDPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIF-FGHGYARLT 329
                     +  +  + Q YI  P ++DG KFD+R Y+L+    P  IF +  G AR  
Sbjct: 243 ----------KPGEDMICQLYISKPFIIDGFKFDLRIYVLVTSCDPLRIFVYNEGLARFA 292

Query: 330 LSLYD----PHSSDLGGHLTNQFMQKKS 353
            + Y      +  D+  HLTN  + K S
Sbjct: 293 TTSYSRPCTDNLDDICMHLTNYSINKHS 320


>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
           sapiens]
          Length = 834

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 26/151 (17%)

Query: 236 IWICKPTASNQGKG----IFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRY 291
           IWI KP A ++G+G    I  +   EE+  L A      D P+     +      VVQ+Y
Sbjct: 330 IWIIKPAAKSRGRGESPDIVCMDRVEEILELAAA-----DHPLSRDNKW------VVQKY 378

Query: 292 IQNPLLVDGRKFDVRSYLLIACTTPYMI-FFGHGYARLTLSLYDPHSSDLGGHLTNQFMQ 350
           I+ PLL+   KFD+R + L+    P  I F+   Y R +   +     D   HL N  +Q
Sbjct: 379 IETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNAVQ 438

Query: 351 K-------KSPLYMLLKEHTVWSMEHLNRYI 374
           K       +SP   LL  H +W+      Y+
Sbjct: 439 KYLKNDVGRSP---LLPAHNMWTSTRFQEYL 466


>gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo
           sapiens]
          Length = 772

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 16/149 (10%)

Query: 233 ETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYI 292
           +  IWI KP A ++G+GI  + + EE+  L      +  +P+  K         VVQ+YI
Sbjct: 276 DRNIWIVKPGAKSRGRGIMCMDHLEEMLKL------VNGNPVVMKDG-----KWVVQKYI 324

Query: 293 QNPLLVDGRKFDVRSYLLIACTTPYMI-FFGHGYARLTLSLYDPHSSDLGGHLTNQFMQK 351
           + PLL+ G KFD+R + L+    P  + F+   Y R +   +   + D   HL N  +QK
Sbjct: 325 ERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQK 384

Query: 352 ----KSPLYMLLKEHTVWSMEHLNRYISD 376
                   + LL    +WS +    ++ +
Sbjct: 385 HLENSCHRHPLLPPDNMWSSQRFQAHLQE 413


>gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo
           sapiens]
          Length = 592

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 75/357 (21%), Positives = 126/357 (35%), Gaps = 90/357 (25%)

Query: 60  PSAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRI--HDSRRDDY 117
           PS ALL+ L+    + +P                  ++ S    +GW +    +   +D+
Sbjct: 79  PSGALLKPLVFRVDETTP-----------------AVVQSVLLERGWNKFDKQEQNAEDW 121

Query: 118 TLKWCEVKSR-DSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGV 176
            L W     R   + S +  +QL +  P    LT K  L   L+   R    +       
Sbjct: 122 NLYWRTSSFRMTEHNSVKPWQQLNHH-PGTTKLTRKDCLAKHLKHMRRMYGTS------- 173

Query: 177 QARLEKDAAAPALEDLPWTSPGYLRPQRVLR-MEEFFPETYRLDLKHEREAFFTLFDETQ 235
                        + +P T   ++ P    + + E+F E   L  KH             
Sbjct: 174 -----------LYQFIPLT---FVMPNDYTKFVAEYFQERQMLGTKHS------------ 207

Query: 236 IWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNP 295
            WICKP   ++G+GI +  + ++                     F      +VQ+YI NP
Sbjct: 208 YWICKPAELSRGRGILIFSDFKD---------------------FIFDDMYIVQKYISNP 246

Query: 296 LLVDGRKFDVRSYLLIACTTPYMIF-FGHGYARLTLSLYD-PHSSDLGGHLTNQFMQKKS 353
           LL+   K D+R Y+ +    P  I+ +  G  R     +D  +  +   HLTN  + K  
Sbjct: 247 LLIGRYKCDLRIYVCVTGFKPLTIYVYQEGLVRFATEKFDLSNLQNNYAHLTNSSINKSG 306

Query: 354 PLYMLLKE----HTVWSMEHLNRYISD------TFWKARGLAKDWVFTTLKVRPLCP 400
             Y  +KE       W++     Y+          WK   + +  + T L + P  P
Sbjct: 307 ASYEKIKEVIGHGCKWTLSRFFSYLRSWDVDDLLLWKK--IHRMVILTILAIAPSVP 361


>gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo
           sapiens]
          Length = 887

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 34/143 (23%)

Query: 214 ETYRLDLKHEREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDP 273
           + Y  +LK +R+         + +I KP     G GI L+RN +++ +            
Sbjct: 142 QNYVKELKKKRKQ--------KTFIVKPANGAMGHGISLIRNGDKLPS------------ 181

Query: 274 IHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGH-GYARLTLSL 332
                        +VQ YI+ P L++G KFD+R Y+L+    P  IF  H G  R+    
Sbjct: 182 ---------QDHLIVQEYIEKPFLMEGYKFDLRIYILVTSCDPLKIFLYHDGLVRMGTEK 232

Query: 333 YDP----HSSDLGGHLTNQFMQK 351
           Y P    + + L  HLTN  + K
Sbjct: 233 YIPPNESNLTQLYMHLTNYSVNK 255


>gi|24308516 tubulin tyrosine ligase [Homo sapiens]
          Length = 377

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 29/164 (17%)

Query: 223 EREAFFTLFD------ETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHH 276
           ERE F   ++      E  +WI K +A  +G+GI +     E+            D I +
Sbjct: 127 EREFFLASYNRKKEDGEGNVWIAKSSAGAKGEGILISSEASELL-----------DFIDN 175

Query: 277 KTPFRGPQARVVQRYIQNPLLVD--GRKFDVRSYLLIACTTPYMIF-FGHGYARLTLSLY 333
           +      Q  V+Q+Y+++PLL++   RKFD+RS++L+     Y I+ +  G  R     Y
Sbjct: 176 Q-----GQVHVIQKYLEHPLLLEPGHRKFDIRSWVLV--DHQYNIYLYREGVLRTASEPY 228

Query: 334 D-PHSSDLGGHLTNQFMQKK-SPLYMLLKEHTVWSMEHLNRYIS 375
              +  D   HLTN  +QK+ S  Y   +E      +  N+Y++
Sbjct: 229 HVDNFQDKTCHLTNHCIQKEYSKNYGKYEEGNEMFFKEFNQYLT 272


>gi|212720861 tubulin tyrosine ligase-like family, member 11 a [Homo
           sapiens]
          Length = 800

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 34/160 (21%)

Query: 205 VLRMEEFFPETYRLD-----LKHEREAFFT----LFDETQIW----ICKPTASNQGKGIF 251
           V  M+  FPE Y        L  E + F      + D+   W    I KP    QG GI+
Sbjct: 291 VRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIY 350

Query: 252 LLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLI 311
           L+++  ++        +++  P             VVQ YI  PLL+D  KFD+R Y+L+
Sbjct: 351 LIKDPSDIRL----AGTLQSRPA------------VVQEYICKPLLIDKLKFDIRLYVLL 394

Query: 312 ACTTPYMIFFG-HGYARLTLSLY-DPHSSDLGG---HLTN 346
               P  I+    G +R     Y +P   +L     HLTN
Sbjct: 395 KSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTN 434


>gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Homo
           sapiens]
          Length = 538

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 34/160 (21%)

Query: 205 VLRMEEFFPETYRLD-----LKHEREAFFT----LFDETQIW----ICKPTASNQGKGIF 251
           V  M+  FPE Y        L  E + F      + D+   W    I KP    QG GI+
Sbjct: 291 VRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIY 350

Query: 252 LLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLI 311
           L+++  ++        +++  P             VVQ YI  PLL+D  KFD+R Y+L+
Sbjct: 351 LIKDPSDIRL----AGTLQSRPA------------VVQEYICKPLLIDKLKFDIRLYVLL 394

Query: 312 ACTTPYMIFFG-HGYARLTLSLY-DPHSSDLGG---HLTN 346
               P  I+    G +R     Y +P   +L     HLTN
Sbjct: 395 KSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTN 434


>gi|12707580 paired-like homeobox 2b [Homo sapiens]
          Length = 314

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 22  GHCGPDLEGAERASATPGP---PGLLNSHRPADSDDTNAAGPSAALLEGLLLGGGKPSPH 78
           G  GP   GA  A+   GP   PG   +   A +    AA  +AA   GL   GG     
Sbjct: 214 GGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQGW 273

Query: 79  STRPGPFFYIGGSNG---ATIISSYCKSKG 105
           +  PGP   I  S G   A+++SS  +  G
Sbjct: 274 APGPGPITSIPDSLGGPFASVLSSLQRPNG 303


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 8   GLRCQPSQPDHDADGHCG----------PDLEGAERASATPGPPGLLN-SHRPADSDDTN 56
           GL+ +P  P    +G  G          P + G+   +  PGPPG       P   D+T 
Sbjct: 481 GLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETG 540

Query: 57  AAG---PSAALLEGLLLG-GGKP 75
            AG   P+   +EG +LG GGKP
Sbjct: 541 IAGLHLPNGG-VEGAVLGKGGKP 562



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 10/90 (11%)

Query: 2   GSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLN----SHRPADSDDTNA 57
           G   ++GLR  P  P     G  G  + G   A   PGPPG          P    D   
Sbjct: 147 GIRGDQGLRGPPGPPG--LPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGL 204

Query: 58  AGPSAALLEGLLLG---GGKPSPHSTRPGP 84
            G +     GL      GG P P    PGP
Sbjct: 205 KGDNGVGQPGLPGAPGQGGAPGPPGL-PGP 233


>gi|239753606 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 177

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 2   GSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPS 61
           GS+  +  R +P+QPDH  +G  GP     E  +AT   PG       ADS   + A   
Sbjct: 82  GSALGQIRRSEPAQPDHAREG--GPSSNRREHGTATRPLPG------DADSASFHWAVNR 133

Query: 62  AALLEGLLLGGGKPSPHS-TRPGP 84
            +L+  +   GG  + H+ +R GP
Sbjct: 134 KSLISSIF--GGMATRHAGSRRGP 155


>gi|239748180 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 177

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 2   GSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPS 61
           GS+  +  R +P+QPDH  +G  GP     E  +AT   PG       ADS   + A   
Sbjct: 82  GSALGQIRRSEPAQPDHAREG--GPSSNRREHGTATRPLPG------DADSASFHWAVNR 133

Query: 62  AALLEGLLLGGGKPSPHS-TRPGP 84
            +L+  +   GG  + H+ +R GP
Sbjct: 134 KSLISSIF--GGMATRHAGSRRGP 155


>gi|239742074 PREDICTED: hypothetical protein XP_002342429 [Homo
           sapiens]
          Length = 177

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 2   GSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPS 61
           GS+  +  R +P+QPDH  +G  GP     E  +AT   PG       ADS   + A   
Sbjct: 82  GSALGQIRRSEPAQPDHAREG--GPSSNRREHGTATRPLPG------DADSASFHWAVNR 133

Query: 62  AALLEGLLLGGGKPSPHS-TRPGP 84
            +L+  +   GG  + H+ +R GP
Sbjct: 134 KSLISSIF--GGMATRHAGSRRGP 155


>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
          Length = 684

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 30/88 (34%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 2   GSSQEEGLRCQPSQPDHDA----DGHCGPDLEGAERAS-ATPGPPGLLNSHRPADSDDTN 56
           G   E GL   P  P  D     DG  GP     ER S   PGPPGL     P    +  
Sbjct: 71  GKPGEAGL---PGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAG 127

Query: 57  AAGPSAALLEGLLLGGGKPSPHSTRPGP 84
            +GP   +    L G   PS     PGP
Sbjct: 128 VSGPPGGI---GLRGPPGPSGLPGLPGP 152


>gi|17402888 neuronal pentraxin receptor [Homo sapiens]
          Length = 500

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 10/63 (15%)

Query: 18  HDADGHCGPD-LEGAERASATPGPPGLLNSH---------RPADSDDTNAAGPSAALLEG 67
           H A G  GP  L GA  ASA P PPG L S           P+ +   +AAG +    E 
Sbjct: 63  HGAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGAAPGEREE 122

Query: 68  LLL 70
           LLL
Sbjct: 123 LLL 125


>gi|121114296 caudal type homeobox 1 [Homo sapiens]
          Length = 265

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 26  PDLEGAERASATPGPPGLLNSHRPADSDDTNAA---GPSAALLEGLLLGGGKPSPHSTRP 82
           PD          P PP    +  PA  DD  AA   GP+A       L  G P   S  P
Sbjct: 43  PDFSSYSHVEPAPAPPTAWGAPFPAPKDDWAAAYGPGPAAPAASPASLAFGPPPDFSPVP 102

Query: 83  GP 84
            P
Sbjct: 103 AP 104


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 9/51 (17%)

Query: 7    EGLRCQPSQPDHDADGHCGPDLEGAERAS--------ATPGPPGLLNSHRP 49
            E L CQ ++PD  A G  GP L G    S         TPGP G     +P
Sbjct: 2714 ESLACQ-TEPDGQAQGVAGPQLVGPTAISPYLPGIQIVTPGPLGRFEKKKP 2763


>gi|194097332 ephrin receptor EphB6 precursor [Homo sapiens]
          Length = 1021

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 8   GLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPSAALLEG 67
           G RCQP       D  C     G  ++SA   P     S  PA S   N A P    LEG
Sbjct: 298 GCRCQPGYQPARGDKACQACPRGLYKSSAGNAP----CSPCPARSHAPNPAAPVCPCLEG 353

Query: 68  LLLGGGKPSPHSTRPGP 84
                  P P +   GP
Sbjct: 354 FYRASSDP-PEAPCTGP 369


>gi|5803066 leukocyte immunoglobulin-like receptor, subfamily A
           (with TM domain), member 1 [Homo sapiens]
          Length = 489

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 29/138 (21%)

Query: 11  CQPSQPDHDADGHCGPDLEGAERASATPGP--PGLLNSHR--PADSDDTNAAGPSAALLE 66
           C+  + +H    +  P   G  RA  + GP  P    S+R    DS+  +     + LLE
Sbjct: 157 CKEGEDEHPQCLNSQPRTHGWSRAIFSVGPVSPSRRWSYRCYAYDSNSPHVWSLPSDLLE 216

Query: 67  GLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLKWCEVKS 126
            L+LG  K    S +PGP    G                         +  TL+     S
Sbjct: 217 LLVLGVSKKPSLSVQPGPIVAPG-------------------------ESLTLQCVSDVS 251

Query: 127 RDSYGSFREGEQLLYQLP 144
            D +  ++EGE+   QLP
Sbjct: 252 YDRFVLYKEGERDFLQLP 269


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 9/86 (10%)

Query: 14  SQPDHDADGHCG-PDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPSAALLEGLLLGG 72
           S   + A G  G P  +G   A   PGPPG+  S  P    +   AG   A   GL+   
Sbjct: 358 SPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGS--PGGKGEMGPAGIPGA--PGLMGAR 413

Query: 73  GKPSPHSTRPGPFFYIG----GSNGA 94
           G P P      P    G    G NGA
Sbjct: 414 GPPGPAGANGAPGLRGGAGEPGKNGA 439


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 12/88 (13%)

Query: 2   GSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPS 61
           G +Q +G   +P +P+       GP  +G  ++   P  PG      P   + +    P 
Sbjct: 106 GGNQSQGPPPRPGKPE-------GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 158

Query: 62  AALLEGLLLGGGK----PSPHSTRP-GP 84
               EG    GG     P PH  +P GP
Sbjct: 159 PGKPEGPPPQGGNQSQGPPPHPGKPEGP 186



 Score = 30.0 bits (66), Expect = 3.9
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 2   GSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPS 61
           G +Q +G    P +P+       GP  +G  ++   P  PG      P   + +    P 
Sbjct: 169 GGNQSQGPPPHPGKPE-------GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 221

Query: 62  AALLEGLLLGGGK----PSPHSTRP-GP 84
               EG    GG     P PH  +P GP
Sbjct: 222 PGKPEGPPSQGGNKPQGPPPHPGKPQGP 249


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 16   PDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPSAALLEGLLLGGGKP 75
            P H    H  P       A   P PP +     P D     A GP  +L  G   GG  P
Sbjct: 1000 PPHHHHHHAPPPQPHHHHAHP-PHPPEMETGGSPDDPPPRLALGPQPSL-RGWRGGGPSP 1057

Query: 76   SPHSTRPGPFFYIGGSNGAT 95
            +P +  P      GG  G++
Sbjct: 1058 TPGAPSPSHHGSAGGGGGSS 1077


>gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo
            sapiens]
          Length = 1723

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 20   ADGHCGPDLEGAERASATPGPPGLLNSHRPADS-DDTNAAGPSAALLEGLLLGGGKPS 76
            A G  G DL GA    +  GPP   +S     + +D +  G  A LL G LLGGG  S
Sbjct: 1669 AGGSSGADLAGA----SLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS 1722


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,264,535
Number of Sequences: 37866
Number of extensions: 928091
Number of successful extensions: 2968
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 2899
Number of HSP's gapped (non-prelim): 106
length of query: 404
length of database: 18,247,518
effective HSP length: 105
effective length of query: 299
effective length of database: 14,271,588
effective search space: 4267204812
effective search space used: 4267204812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.