Search of human proteins with 190885493

Search of human proteins with 190885493

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190885493 hypothetical protein LOC84984 [Homo sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190885493 hypothetical protein LOC84984 [Homo sapiens]             340   4e-94
gi|191252785 centrobin, centrosomal BRCA2 interacting protein is...    37   0.010
gi|80861396 centrobin, centrosomal BRCA2 interacting protein iso...    37   0.010
gi|102467242 inner centromere protein antigens 135/155kDa isofor...    37   0.010
gi|102467235 inner centromere protein antigens 135/155kDa isofor...    35   0.023
gi|7662414 inositol polyphosphate-5-phosphatase F [Homo sapiens]       33   0.11 
gi|14150064 polymerase (RNA) III (DNA directed) polypeptide G (3...    33   0.15 
gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]            30   0.74 
gi|127138957 zinc finger protein 537 [Homo sapiens]                    30   0.74 
gi|223633939 solute carrier family 39 (zinc transporter), member...    30   1.3  
gi|223633937 solute carrier family 39 (zinc transporter), member...    30   1.3  
gi|221316566 cysteine and histidine-rich domain-containing prote...    29   1.6  
gi|71143112 ring finger and WD repeat domain 3 [Homo sapiens]          29   1.6  
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa...    29   1.6  
gi|81295809 pericentrin [Homo sapiens]                                 29   2.1  
gi|27735047 DCN1, defective in cullin neddylation 1, domain cont...    29   2.1  
gi|40068497 FAST kinase domains 3 [Homo sapiens]                       29   2.1  
gi|133908641 myosin binding protein C, fast type [Homo sapiens]        28   2.8  
gi|50726968 microfibrillar-associated protein 1 [Homo sapiens]         28   2.8  
gi|29826335 eukaryotic translation initiation factor 2 beta [Hom...    28   2.8  
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]         28   2.8  
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]        28   2.8  
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]        28   2.8  
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s...    28   2.8  
gi|62899065 centrosomal protein 72 kDa [Homo sapiens]                  28   3.7  
gi|148596998 coiled-coil domain containing 122 [Homo sapiens]          28   3.7  
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]             28   4.8  
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]             28   4.8  
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa...    28   4.8  
gi|212286172 RNA polymerase I polypeptide B isoform 2 [Homo sapi...    28   4.8  

>gi|190885493 hypothetical protein LOC84984 [Homo sapiens]
          Length = 167

 Score =  340 bits (871), Expect = 4e-94
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MYMGMMCTAKKCGIRFQPPAIILIYESEIKGKIRQRIMPVRNFSKFSDCTRAAEQLKNNP 60
           MYMGMMCTAKKCGIRFQPPAIILIYESEIKGKIRQRIMPVRNFSKFSDCTRAAEQLKNNP
Sbjct: 1   MYMGMMCTAKKCGIRFQPPAIILIYESEIKGKIRQRIMPVRNFSKFSDCTRAAEQLKNNP 60

Query: 61  RHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKR 120
           RHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKR
Sbjct: 61  RHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKR 120

Query: 121 KSIMDELFEKNQKKKDDPNFVYDIEVEFPQDDQLQSCGWDTESADEF 167
           KSIMDELFEKNQKKKDDPNFVYDIEVEFPQDDQLQSCGWDTESADEF
Sbjct: 121 KSIMDELFEKNQKKKDDPNFVYDIEVEFPQDDQLQSCGWDTESADEF 167


>gi|191252785 centrobin, centrosomal BRCA2 interacting protein
           isoform alpha [Homo sapiens]
          Length = 903

 Score = 36.6 bits (83), Expect = 0.010
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 53  AEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKL 112
           AE L ++      L QVS     +L++ LR  LS Q+ A    Q+   +T  P E L+  
Sbjct: 14  AEDLLSDSSEPPGLNQVSSEVTSQLYASLR--LSRQAEATARAQLYLPSTSPPHEGLDGF 71

Query: 113 DDKELAKRKSIMDELFEKNQKKKDDPNFVYDIE 145
             +EL++  S+     EKN KKKD    ++++E
Sbjct: 72  A-QELSRSLSVG---LEKNLKKKDGSKHIFEME 100


>gi|80861396 centrobin, centrosomal BRCA2 interacting protein
           isoform beta [Homo sapiens]
          Length = 925

 Score = 36.6 bits (83), Expect = 0.010
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 53  AEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKL 112
           AE L ++      L QVS     +L++ LR  LS Q+ A    Q+   +T  P E L+  
Sbjct: 14  AEDLLSDSSEPPGLNQVSSEVTSQLYASLR--LSRQAEATARAQLYLPSTSPPHEGLDGF 71

Query: 113 DDKELAKRKSIMDELFEKNQKKKDDPNFVYDIE 145
             +EL++  S+     EKN KKKD    ++++E
Sbjct: 72  A-QELSRSLSVG---LEKNLKKKDGSKHIFEME 100


>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
           [Homo sapiens]
          Length = 914

 Score = 36.6 bits (83), Expect = 0.010
 Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 14/137 (10%)

Query: 30  KGKIRQRIMPVRNFSKFSDCTRAAEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQS 89
           K K RQR+  +R   +     R  ++++ + R +  LE+V L++ E+L   L+       
Sbjct: 531 KEKERQRLENLRRKEEAEQLRR--QKVEEDKRRR--LEEVKLKREERLRKVLQA------ 580

Query: 90  LAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFP 149
             E +EQ++ E     E+   ++D+K     K+  + L E+  KKK     + ++E    
Sbjct: 581 -RERVEQMKEEKKKQIEQKFAQIDEK---TEKAKEERLAEEKAKKKAAAKKMEEVEARRK 636

Query: 150 QDDQLQSCGWDTESADE 166
           Q+++ +   W  +  +E
Sbjct: 637 QEEEARRLRWLQQEEEE 653


>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
           [Homo sapiens]
          Length = 918

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 14/135 (10%)

Query: 32  KIRQRIMPVRNFSKFSDCTRAAEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQSLA 91
           K RQR+  +R   +     R  ++++ + R +  LE+V L++ E+L   L+         
Sbjct: 537 KERQRLENLRRKEEAEQLRR--QKVEEDKRRR--LEEVKLKREERLRKVLQA-------R 585

Query: 92  ETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFPQD 151
           E +EQ++ E     E+   ++D+K     K+  + L E+  KKK     + ++E    Q+
Sbjct: 586 ERVEQMKEEKKKQIEQKFAQIDEK---TEKAKEERLAEEKAKKKAAAKKMEEVEARRKQE 642

Query: 152 DQLQSCGWDTESADE 166
           ++ +   W  +  +E
Sbjct: 643 EEARRLRWLQQEEEE 657


>gi|7662414 inositol polyphosphate-5-phosphatase F [Homo sapiens]
          Length = 1132

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 16/149 (10%)

Query: 17  QPPAIILIYESEIKGKIRQRIMPVRNF--SKFSDCTRAAEQLKNNPRHKSYLEQVSLRQL 74
           +P   I+   S+ +G + Q     +NF  SKFS   +  +Q K+N    +  +  +  + 
Sbjct: 754 KPHEDIIGIRSQNQGSLAQG----KNFLMSKFSSLNQKVKQTKSNVNIGNLRKLGNFTKP 809

Query: 75  EKLFSFLRGYLS-----GQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFE 129
           E   +FL+  L        S  ETME       +  E D +   D +     S   + F 
Sbjct: 810 EMKVNFLKPNLKVNLWKSDSSLETMENTGVMDKVQAESDGDMSSDND-----SYHSDEFL 864

Query: 130 KNQKKKDDPNFVYDIEVEFPQDDQLQSCG 158
            N K  +D      +E   P D  L SCG
Sbjct: 865 TNSKSDEDRQLANSLESVGPIDYVLPSCG 893


>gi|14150064 polymerase (RNA) III (DNA directed) polypeptide G
           (32kD) like [Homo sapiens]
          Length = 218

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 21/147 (14%)

Query: 22  ILIYESEIKGKIRQR------IMPVRNFSKFSDCTRAAEQLKN----NPRHKSYLEQVSL 71
           +L  + E++G +RQ        +P R+  ++SD  + +  + N    NP  +    ++ +
Sbjct: 60  VLALKQELRGAMRQLPYFIRPAVPKRDVERYSDKYQMSGPIDNAIDWNPDWRRLPRELKI 119

Query: 72  RQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLD--DKELAKRKSIMDELFE 129
           R  +         L  + +   + +   +TT D EE + KL+  +K+  +  S  DE  E
Sbjct: 120 RVRK---------LQKERITILLPKRPPKTTEDKEETIQKLETLEKKEEEVTSEEDEEKE 170

Query: 130 KNQKKKDDPNFVYDIEVEFPQDDQLQS 156
           + ++K+++    YD E    + D + S
Sbjct: 171 EEEEKEEEEEEEYDEEEHEEETDYIMS 197


>gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]
          Length = 786

 Score = 30.4 bits (67), Expect = 0.74
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 88  QSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVE 147
           ++L + +E+ ++E     +E+  K D KE  K  S++D+    + KKKD      DI+VE
Sbjct: 110 ETLIKPLEKFRKEQLGAVKEEKKKFD-KETEKNYSLIDKHLNLSAKKKDSHLQEADIQVE 168


>gi|127138957 zinc finger protein 537 [Homo sapiens]
          Length = 1081

 Score = 30.4 bits (67), Expect = 0.74
 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 49   CTRAAEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEED 108
            C   A Q++    + S+LE     +L  L       ++ Q +A+T    ++  T  PEED
Sbjct: 978  CNDCASQIRTPSTYISHLESHLGFRLRDLSKLSTEQINSQ-IAQTKSPSEKMVTSSPEED 1036

Query: 109  LN-----KLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVE 147
            L      KL ++  A + ++   L + + K  +D + +Y  E+E
Sbjct: 1037 LGTSYQCKLCNRTFASKHAVKLHLSKTHGKSPED-HLLYVSELE 1079


>gi|223633939 solute carrier family 39 (zinc transporter), member 12
           isoform 1 [Homo sapiens]
          Length = 691

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 18/125 (14%)

Query: 12  CGIRFQPPAIILI----YESEIKGKIRQRIMPVRNFSKFSDCTRAAEQLK-NNPRHKSYL 66
           C + F+P A++LI    +E +++ ++ QR+  +  +         + +L  +N  +K YL
Sbjct: 85  CNLCFEPDALLLIAGGNFEDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYL 144

Query: 67  EQ-VSLRQ-----------LEKLFSFLRGYL-SGQSLAETMEQIQRETTIDPEEDLNKLD 113
              +SLRQ            E + +F R Y  + QS     + +Q+++ I   E  N+  
Sbjct: 145 HSLLSLRQDEDSSFLSQNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANEST 204

Query: 114 DKELA 118
             +LA
Sbjct: 205 LPQLA 209


>gi|223633937 solute carrier family 39 (zinc transporter), member 12
           isoform 2 [Homo sapiens]
          Length = 654

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 18/125 (14%)

Query: 12  CGIRFQPPAIILI----YESEIKGKIRQRIMPVRNFSKFSDCTRAAEQLK-NNPRHKSYL 66
           C + F+P A++LI    +E +++ ++ QR+  +  +         + +L  +N  +K YL
Sbjct: 85  CNLCFEPDALLLIAGGNFEDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYL 144

Query: 67  EQ-VSLRQ-----------LEKLFSFLRGYL-SGQSLAETMEQIQRETTIDPEEDLNKLD 113
              +SLRQ            E + +F R Y  + QS     + +Q+++ I   E  N+  
Sbjct: 145 HSLLSLRQDEDSSFLSQNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANEST 204

Query: 114 DKELA 118
             +LA
Sbjct: 205 LPQLA 209


>gi|221316566 cysteine and histidine-rich domain-containing protein
           1 isoform a [Homo sapiens]
          Length = 332

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 23/153 (15%)

Query: 3   MGMMCTAKKCGIRFQPPAI----------ILIYESEIKG--KIRQRIMPVRNFSKFSDCT 50
           M ++C  + CG RF P             + ++   +KG    ++R     +F     CT
Sbjct: 1   MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCT 60

Query: 51  RAAEQLKNNPRH-KSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDL 109
           +     +  P   K  ++    ++L +L    + ++      + +E I+R +   P+E +
Sbjct: 61  KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHII--QAPKPVEAIKRPS---PDEPM 115

Query: 110 NKLDDKELAKRKSIMDEL-----FEKNQKKKDD 137
             L+ K  A  K  +D+L      E+N+K++D+
Sbjct: 116 TNLELKISASLKQALDKLKLSSGNEENKKEEDN 148


>gi|71143112 ring finger and WD repeat domain 3 [Homo sapiens]
          Length = 774

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 71  LRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEK 130
           L++L  +  FLR   S  S+     + +R  +             + A+ ++ +D  F+ 
Sbjct: 127 LQRLHGMLEFLRPSSSNHSVGPM--RTRRRVSASRRARAGGSQRTDSARLRAPLDAYFQV 184

Query: 131 NQKKKDDPNFVYDIEVEFPQDDQLQ---SCGWDTESADEF 167
           ++ + D P   YD E   P  ++LQ   S   D++S+ E+
Sbjct: 185 SRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEY 224


>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
           sapiens]
          Length = 1710

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)

Query: 90  LAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFP 149
           L +   QI      D EED +  +DK  ++R++ ++  ++++++ K D            
Sbjct: 206 LGQKKRQIDSSEEDDDEEDYD--NDKRSSRRQATVNVSYKEDEEMKTD------------ 251

Query: 150 QDDQLQSCGWDTESADE 166
            DD L+ CG D    +E
Sbjct: 252 SDDLLEVCGEDVPQPEE 268


>gi|81295809 pericentrin [Homo sapiens]
          Length = 3336

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 45  KFSDCTRAAE-QLKNNPRHKSYLEQVSLRQLEKLFSFL-RGYLSGQSLAETMEQIQRETT 102
           KF +  +  + +L+N       L+  S  ++ +L+S L     S Q L+E  EQ+   T+
Sbjct: 437 KFKESEKEKQLELENLQASYEDLKAQSQEEIRRLWSQLDSARTSRQELSELHEQLLARTS 496

Query: 103 IDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFPQ 150
               EDL +L  +E  + +S +++L    +KK  D    Y  ++   Q
Sbjct: 497 --RVEDLEQLKQREKTQHESELEQLRIYFEKKLRDAEKTYQEDLTLLQ 542


>gi|27735047 DCN1, defective in cullin neddylation 1, domain
           containing 3 [Homo sapiens]
          Length = 304

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 63  KSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEE 107
           KS  E+ SL++LE+LF   +       L E ME+   +  +DP E
Sbjct: 80  KSNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTE 124


>gi|40068497 FAST kinase domains 3 [Homo sapiens]
          Length = 662

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 43  FSKFSDCTRAAEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETM 94
           FS+ SDC R  + +KN      Y    +L   E++ SF+    + ++L +TM
Sbjct: 81  FSQVSDCDRLEQNVKNEESQMFYRRLSNLTSSEEVLSFIS---TMETLPDTM 129


>gi|133908641 myosin binding protein C, fast type [Homo sapiens]
          Length = 1141

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 7/52 (13%)

Query: 86  SGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDD 137
           SGQSL    E  +R T+    +   +LD   L K++ +++E  EK +KKKDD
Sbjct: 161 SGQSL----ESFKR-TSEKKSDTAGELDFSGLLKKREVVEE--EKKKKKKDD 205


>gi|50726968 microfibrillar-associated protein 1 [Homo sapiens]
          Length = 439

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 15/61 (24%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 96  QIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFPQDDQLQ 155
           +++RE + + EE+  ++DD+E+ +R+ +M    ++ Q++K++   V ++E E    ++ +
Sbjct: 126 RMEREDSSEEEEE--EIDDEEIERRRGMMR---QRAQERKNEEMEVMEVEDEGRSGEESE 180

Query: 156 S 156
           S
Sbjct: 181 S 181


>gi|29826335 eukaryotic translation initiation factor 2 beta [Homo
           sapiens]
          Length = 333

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 92  ETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDEL----FEKNQKKKDDPNFVYDIE 145
           ET     +E   +P ED +   D+E  ++K   D+L    F   +KKK     ++DI+
Sbjct: 35  ETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDID 92


>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
          Length = 3639

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 16/58 (27%), Positives = 29/58 (50%)

Query: 68  QVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMD 125
           + +  QLE+L    R    GQ LAE +E +QR   ++ +   +      LA++ + +D
Sbjct: 508 EAASHQLEELQEPARSTACGQQLAEVVELLQRHDLLEAQVSAHGAHVSHLAQQTAELD 565


>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
          Length = 625

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 66  LEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMD 125
           LEQ+   + ++L + LR   +G +     +Q + E  +  ++DLN    + L     +++
Sbjct: 292 LEQIQTAKTQEL-NMLREQTTGLAAELQQQQAEYEDLMGQKDDLNSQLQESLRANSRLLE 350

Query: 126 ELFEKNQKKK 135
           +L E  Q+K+
Sbjct: 351 QLQEIGQEKE 360


>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
          Length = 841

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 66  LEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMD 125
           LEQ+   + ++L + LR   +G +     +Q + E  +  ++DLN    + L     +++
Sbjct: 345 LEQIQTAKTQEL-NMLREQTTGLAAELQQQQAEYEDLMGQKDDLNSQLQESLRANSRLLE 403

Query: 126 ELFEKNQKKK 135
           +L E  Q+K+
Sbjct: 404 QLQEIGQEKE 413


>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
           sapiens]
          Length = 531

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 20/94 (21%)

Query: 51  RAAEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTIDPEEDLN 110
           +  + +KN+ + K + E V+L +              Q L E  E   R     P+ D N
Sbjct: 324 KTEKAMKNHEKSKKHREMVALLK--------------QQLEEEEENFSR-----PQIDEN 364

Query: 111 KLDD-KELAKRKSIMDELFEKNQKKKDDPNFVYD 143
            LDD  E     +   +L +K +KKK  P   YD
Sbjct: 365 PLDDNSEEEMEDAPKQKLSKKQKKKKQKPAQNYD 398


>gi|62899065 centrosomal protein 72 kDa [Homo sapiens]
          Length = 647

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 31  GKIRQRIMPVRNFSKFSDCTRAAEQLKNNPR-HKSYLEQVSLRQLEKLFSFLRGYLSGQS 89
           GK R+R MPV  F  FSD     E L    R H S + + SL + +   S     LS   
Sbjct: 330 GKCRKRRMPVGRFQTFSD----QEGLGCPERTHGSSVPKESLSRQDSSESRNGRTLSQPE 385

Query: 90  LAETMEQIQRETTIDPEE---DLNKLDDKELAKRKSIMDELFE 129
            +ET EQ  R  T   E      + L  K+ A + ++++ L +
Sbjct: 386 ASETEEQRSRGVTDTREPSPGSHSALPGKKTALQAALLETLLD 428


>gi|148596998 coiled-coil domain containing 122 [Homo sapiens]
          Length = 273

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 11/96 (11%)

Query: 70  SLRQLEKLFSFLRGYLSGQSLAETMEQIQRETTID-----------PEEDLNKLDDKELA 118
           SL ++E  +SF+      +   + ++ ++ E   D            +ED+  L DK + 
Sbjct: 138 SLGEVESKWSFMTELHEKRDFVKKLKTMKEELMQDLQNPGGNRITQVQEDITNLKDKIIT 197

Query: 119 KRKSIMDELFEKNQKKKDDPNFVYDIEVEFPQDDQL 154
            ++SI+++     ++KK       +IEV+  + D +
Sbjct: 198 VKESIIEKTCFLEEEKKTHEKLRKEIEVQHKRYDAI 233


>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
          Length = 1123

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 20/126 (15%)

Query: 31  GKI-RQRIMPVRNFSKFSDCTRAAEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQS 89
           GK+ R R +     S      +A +QL    +H+ +LE+   +QL+           G+ 
Sbjct: 486 GKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQ----------LGKI 535

Query: 90  LAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIM---DELFEKNQKKKDDPNFVYDIEV 146
           L +T E + R+ T  PEE      ++EL +++ ++     L    +   +  +   D+E 
Sbjct: 536 LTKTGE-LPRQPTTHPEE-----TEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEE 589

Query: 147 EFPQDD 152
           E  +DD
Sbjct: 590 EDEEDD 595


>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
          Length = 1122

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 20/126 (15%)

Query: 31  GKI-RQRIMPVRNFSKFSDCTRAAEQLKNNPRHKSYLEQVSLRQLEKLFSFLRGYLSGQS 89
           GK+ R R +     S      +A +QL    +H+ +LE+   +QL+           G+ 
Sbjct: 485 GKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQ----------LGKI 534

Query: 90  LAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIM---DELFEKNQKKKDDPNFVYDIEV 146
           L +T E + R+ T  PEE      ++EL +++ ++     L    +   +  +   D+E 
Sbjct: 535 LTKTGE-LPRQPTTHPEE-----TEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEE 588

Query: 147 EFPQDD 152
           E  +DD
Sbjct: 589 EDEEDD 594


>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
           sapiens]
          Length = 1782

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 67  EQVSLRQLEKLFSFLRGYLSGQSLAETMEQ---IQRETTIDPEEDLNKLD-DKELAKRKS 122
           EQ  L   E   +  +G L+GQ    + E+   I  E      ED++K D DKE+A + +
Sbjct: 70  EQDELSLQEGDLNGQKGALNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDSDKEMATKSA 129

Query: 123 IMDELFEKNQKK 134
           ++ ++ +  Q++
Sbjct: 130 VVHDITDDGQEE 141


>gi|212286172 RNA polymerase I polypeptide B isoform 2 [Homo
           sapiens]
          Length = 1079

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 12/54 (22%)

Query: 2   YMGMMCTAKKCGIRFQPPAIILIYESE------------IKGKIRQRIMPVRNF 43
           Y+ +M  +K C +R  PP  ++ +  E            I+  IR  IMP RNF
Sbjct: 80  YVPIMVKSKLCNLRNLPPQALIEHHEEAEEMGGYFIINGIEKVIRMLIMPRRNF 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,854,496
Number of Sequences: 37866
Number of extensions: 226655
Number of successful extensions: 1072
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1051
Number of HSP's gapped (non-prelim): 61
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.