Guide to the Human Genome
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Name: FASTKD3 Sequence: fasta or formatted (662aa) NCBI GI: 40068497
Description:

FAST kinase domains 3

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         33           2
 C cysteine            3.3         22           2
 D aspartate           2.9         19           1
 E glutamate           7.1         47           2
 F phenylalanine       5.4         36           2
 G glycine             3.6         24           2
 H histidine           3.8         25           2
 I isoleucine          4.7         31           2
 K lysine              6.8         45           2
 L leucine            15.4        102           3
 M methionine          1.5         10           1
 N asparagine          4.5         30           2
 P proline             5.1         34           2
 Q glutamine           5.3         35           1
 R arginine            4.7         31           2
 S serine              6.8         45           2
 T threonine           4.5         30           1
 V valine              6.5         43           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FAST kinase domains 3 
TBRG4                 0.070   cell cycle progression 2 protein isoform 1 
FASTK                 0.065   Fas-activated serine/threonine kinase isoform 1 [Homo...
FASTK                 0.065   Fas-activated serine/threonine kinase isoform 4 [Hom...
FASTKD1               0.055   FAST kinase domains 1 
TBRG4                 0.040   cell cycle progression 2 protein isoform 2 
TBRG4                 0.040   cell cycle progression 2 protein isoform 2 
FASTKD5               0.034   FAST kinase domains 5 
FASTKD2               0.032   FAST kinase domains 2 
FASTKD2               0.032   FAST kinase domains 2 
FASTKD2               0.032   FAST kinase domains 2 
SCYL3                 0.006   SCY1-like 3 isoform 2 
SCYL3                 0.006   SCY1-like 3 isoform 1 
PRKDC                 0.006   protein kinase, DNA-activated, catalytic polypeptid...
PRKDC                 0.006   protein kinase, DNA-activated, catalytic polypeptide...
LOC731751             0.006   PREDICTED: similar to protein kinase, DNA-activated...
KPNA1                 0.005   karyopherin alpha 1 
FAM114A2              0.005   hypothetical protein LOC10827 
GLI3                  0.004   GLI-Kruppel family member GLI3 
KPNA6                 0.004   karyopherin alpha 6 
KPNA5                 0.004   karyopherin alpha 5 
LOC100293612          0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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