Guide to the Human Genome
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Name: INPP5F Sequence: fasta or formatted (1132aa) NCBI GI: 7662414
Description:

inositol polyphosphate-5-phosphatase F

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         56           2
 C cysteine            1.6         18           1
 D aspartate           5.8         66           2
 E glutamate           6.9         78           2
 F phenylalanine       3.4         38           2
 G glycine             5.1         58           2
 H histidine           2.8         32           2
 I isoleucine          5.7         65           2
 K lysine              7.2         81           3
 L leucine             9.3        105           4
 M methionine          2.7         30           1
 N asparagine          4.5         51           2
 P proline             4.6         52           2
 Q glutamine           6.2         70           2
 R arginine            4.9         56           2
 S serine              9.2        104           4
 T threonine           4.6         52           1
 V valine              6.5         74           2
 W tryptophan          1.1         13           2
 Y tyrosine            2.9         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol polyphosphate-5-phosphatase F 
SACM1L                0.121   suppressor of actin 1 
SYNJ1                 0.077   synaptojanin 1 isoform d 
SYNJ1                 0.074   synaptojanin 1 isoform c 
SYNJ1                 0.074   synaptojanin 1 isoform a 
SYNJ1                 0.074   synaptojanin 1 isoform b 
SYNJ2                 0.069   synaptojanin 2 
FIG4                  0.046   Sac domain-containing inositol phosphatase 3 
HEG1                  0.007   HEG homolog 1 
MUC3A                 0.006   PREDICTED: mucin 3A, cell surface associated, parti...
BPTF                  0.006   bromodomain PHD finger transcription factor isoform ...
MKL2                  0.006   megakaryoblastic leukemia 2 protein 
PHC2                  0.006   polyhomeotic-like 2 isoform a 
DSPP                  0.006   dentin sialophosphoprotein preproprotein 
MLL3                  0.006   myeloid/lymphoid or mixed-lineage leukemia 3 
REXO1                 0.005   transcription elongation factor B polypeptide 3 bin...
MTUS1                 0.005   mitochondrial tumor suppressor 1 isoform 5 
MTUS1                 0.005   mitochondrial tumor suppressor 1 isoform 1 
MTUS1                 0.005   mitochondrial tumor suppressor 1 isoform 2 
MTUS1                 0.005   mitochondrial tumor suppressor 1 isoform 4 
LOC100133408          0.005   PREDICTED: similar to mucin 
ZBTB2                 0.005   zinc finger and BTB domain containing 2 
MUC3B                 0.005   PREDICTED: mucin 3B, cell surface associated, parti...
CTR9                  0.005   SH2 domain binding protein 1 
LOC100134138          0.005   PREDICTED: similar to mucin, partial 
KLF12                 0.005   Kruppel-like factor 12 
GON4L                 0.005   gon-4-like isoform a 
C3orf30               0.005   hypothetical protein LOC152405 
DST                   0.004   dystonin isoform 4 
DST                   0.004   dystonin isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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