Guide to the Human Genome
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Name: CEP72 Sequence: fasta or formatted (647aa) NCBI GI: 62899065
Description:

centrosomal protein 72 kDa

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         48           2
 C cysteine            2.2         14           2
 D aspartate           4.8         31           2
 E glutamate           9.1         59           2
 F phenylalanine       1.7         11           1
 G glycine             5.7         37           2
 H histidine           4.3         28           2
 I isoleucine          1.4          9           1
 K lysine              4.8         31           2
 L leucine            13.3         86           3
 M methionine          2.0         13           1
 N asparagine          1.5         10           1
 P proline             5.1         33           2
 Q glutamine           6.2         40           4
 R arginine            7.0         45           2
 S serine             12.2         79           2
 T threonine           4.3         28           1
 V valine              4.8         31           2
 W tryptophan          0.6          4           1
 Y tyrosine            1.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 72 kDa 
LRRC36                0.089   leucine rich repeat containing 36 isoform 1 
LRRC36                0.034   leucine rich repeat containing 36 isoform 2 
C21orf2               0.025   hypothetical protein LOC755 
LRGUK                 0.021   leucine-rich repeats and guanylate kinase domain con...
LRRC50                0.021   leucine rich repeat containing 50 
LOC654258             0.018   PREDICTED: similar to leucine rich repeat containin...
LRRC49                0.018   leucine rich repeat containing 49 
CCDC136               0.018   coiled-coil domain containing 136 
GRIPAP1               0.018   GRIP1 associated protein 1 isoform 1 
PPP1R7                0.018   protein phosphatase 1, regulatory subunit 7 
CEP110                0.018   centrosomal protein 110kDa 
LOC100129335          0.017   PREDICTED: Leucine-rich repeat-containing protein E...
LOC100129335          0.017   PREDICTED: Leucine-rich repeat-containing protein E...
LOC100129335          0.017   PREDICTED: Leucine-rich repeat-containing protein E...
LOC100129335          0.017   PREDICTED: Leucine-rich repeat-containing protein E...
CEP164                0.017   centrosomal protein 164kDa 
FKBP15                0.017   FK506 binding protein 15, 133kDa 
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LRRC48                0.017   leucine rich repeat containing 48 isoform b 
LRRC48                0.017   leucine rich repeat containing 48 isoform b 
LRRC48                0.017   leucine rich repeat containing 48 isoform a 
LRRC48                0.017   leucine rich repeat containing 48 isoform a 
CROCC                 0.017   ciliary rootlet coiled-coil 
ERC2                  0.017   cytomatrix protein p110 
GOLGB1                0.017   golgi autoantigen, golgin subfamily b, macrogolgin ...
AZI1                  0.016   5-azacytidine induced 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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