Guide to the Human Genome
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Name: DCUN1D3 Sequence: fasta or formatted (304aa) NCBI GI: 27735047
Description:

DCN1, defective in cullin neddylation 1, domain containing 3

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         19           2
 C cysteine            3.3         10           1
 D aspartate           5.9         18           1
 E glutamate          10.9         33           2
 F phenylalanine       5.9         18           2
 G glycine             7.9         24           2
 H histidine           1.0          3           1
 I isoleucine          3.3         10           1
 K lysine              6.2         19           2
 L leucine             8.6         26           3
 M methionine          1.6          5           1
 N asparagine          4.3         13           2
 P proline             4.9         15           2
 Q glutamine           3.9         12           1
 R arginine            6.9         21           2
 S serine              7.9         24           2
 T threonine           5.3         16           1
 V valine              3.0          9           1
 W tryptophan          2.0          6           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DCN1, defective in cullin neddylation 1, domain cont... 
DCUN1D2               0.241   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D1               0.235   RP42 homolog 
DCUN1D5               0.147   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D4               0.142   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D4               0.114   DCN1, defective in cullin neddylation 1, domain cont...
YY1AP1                0.013   YY1-associated protein isoform 2 
ZC3H18                0.013   zinc finger CCCH-type containing 18 
LOC100293814          0.012   PREDICTED: hypothetical protein 
LOC100288238          0.012   PREDICTED: hypothetical protein 
LOC100288238          0.012   PREDICTED: hypothetical protein XP_002342947 
MUC12                 0.012   PREDICTED: mucin 12 
LOC100130716          0.012   PREDICTED: similar to mucin 11 
LOC100130716          0.012   PREDICTED: similar to Mucin-12 
KLHDC7A               0.012   kelch domain containing 7A 
NOLC1                 0.008   nucleolar and coiled-body phosphoprotein 1 
TTBK1                 0.008   tau tubulin kinase 1 
C14orf4               0.008   chromosome 14 open reading frame 4 
FLG                   0.008   filaggrin 
SDK1                  0.008   sidekick 1 
LOC100132598          0.007   PREDICTED: similar to zinc finger protein 165 [Homo...
LOC100132598          0.007   PREDICTED: similar to zinc finger protein 165 [Homo...
CCDC73                0.007   sarcoma antigen NY-SAR-79 
KIAA1045              0.007   hypothetical protein LOC23349 
RSPH3                 0.007   radial spoke 3 homolog 
CHM                   0.007   choroideremia isoform a 
C3orf34               0.007   hypothetical protein LOC84984 
LOC642574             0.005   PREDICTED: IQ motif and ankyrin repeat domain-conta...
MUC12                 0.005   PREDICTED: mucin 12, cell surface associated 
CYLC1                 0.005   cylicin, basic protein of sperm head cytoskeleton 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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