Guide to the Human Genome
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Name: ARHGAP10 Sequence: fasta or formatted (786aa) NCBI GI: 50843948
Description:

Rho GTPase activating protein 10

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         46           2
 C cysteine            1.4         11           1
 D aspartate           4.7         37           2
 E glutamate           9.0         71           3
 F phenylalanine       5.3         42           2
 G glycine             5.0         39           2
 H histidine           2.7         21           1
 I isoleucine          4.6         36           2
 K lysine              7.8         61           3
 L leucine             9.0         71           2
 M methionine          2.3         18           1
 N asparagine          4.5         35           1
 P proline             6.4         50           2
 Q glutamine           4.3         34           1
 R arginine            5.6         44           2
 S serine              8.0         63           2
 T threonine           5.3         42           3
 V valine              5.2         41           2
 W tryptophan          0.9          7           1
 Y tyrosine            2.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 10 
ARHGAP26              0.535   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.523   GTPase regulator associated with the focal adhesion k...
FLJ32810              0.453   Rho-type GTPase-activating protein FLJ32810 
OPHN1                 0.386   oligophrenin 1 
CHN1                  0.070   chimerin (chimaerin) 1 isoform a 
CHN1                  0.070   chimerin (chimaerin) 1 isoform b 
CHN2                  0.067   beta chimerin isoform 2 
CHN2                  0.067   beta chimerin isoform 1 
ACAP2                 0.067   centaurin, beta 2 
ARHGAP15              0.065   ARHGAP15 
ARHGAP27              0.060   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.060   Rho GTPase activating protein 27 isoform a 
ARHGAP12              0.058   Rho GTPase activating protein 12 
ACAP3                 0.058   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
GRLF1                 0.055   glucocorticoid receptor DNA binding factor 1 
ARHGAP21              0.055   Rho GTPase activating protein 21 
HMHA1                 0.051   minor histocompatibility antigen HA-1 
ARHGAP23              0.050   Rho GTPase activating protein 23 
GMIP                  0.049   GEM interacting protein 
SNX26                 0.049   sorting nexin 26 
ARHGAP9               0.049   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.049   Rho GTPase activating protein 9 isoform 3 
RACGAP1               0.048   Rac GTPase activating protein 1 
RACGAP1               0.048   Rac GTPase activating protein 1 
RACGAP1               0.048   Rac GTPase activating protein 1 
RICH2                 0.048   Rho GTPase-activating protein RICH2 
ARHGAP5               0.048   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.048   Rho GTPase activating protein 5 isoform b 
ARHGAP22              0.048   Rho GTPase activating protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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