Guide to the Human Genome
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Name: HECTD2 Sequence: fasta or formatted (207aa) NCBI GI: 190341082
Description:

HECT domain containing 2 isoform b

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [776aa] HECT domain containing 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         23           2
 C cysteine            1.0          2           1
 D aspartate           5.3         11           1
 E glutamate           7.2         15           2
 F phenylalanine       4.8         10           1
 G glycine             3.9          8           1
 H histidine           1.0          2           1
 I isoleucine          4.8         10           1
 K lysine              8.7         18           2
 L leucine             5.3         11           2
 M methionine          1.9          4           1
 N asparagine          3.9          8           1
 P proline             9.2         19           3
 Q glutamine           2.4          5           1
 R arginine            3.9          8           1
 S serine             10.1         21           3
 T threonine           5.8         12           2
 V valine              8.2         17           2
 W tryptophan          0.5          1           1
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HECT domain containing 2 isoform b 
HECTD2                0.964   HECT domain containing 2 isoform a 
ANKRD12               0.021   ankyrin repeat domain 12 isoform 2 
FAM164A               0.018   hypothetical protein LOC51101 
ANKRD12               0.018   ankyrin repeat domain 12 isoform 1 
CCDC88C               0.018   DVL-binding protein DAPLE 
ARMCX2                0.018   ALEX2 protein 
ARMCX2                0.018   ALEX2 protein 
GLCCI1                0.013   glucocorticoid induced transcript 1 
RSBN1                 0.013   round spermatid basic protein 1 
DCC                   0.013   deleted in colorectal carcinoma 
LOC100292930          0.013   PREDICTED: hypothetical protein 
LOC100289813          0.013   PREDICTED: hypothetical protein XP_002346987 
LOC100287094          0.013   PREDICTED: hypothetical protein XP_002342836 
LOC100287094          0.013   PREDICTED: hypothetical protein 
SRRM1                 0.013   serine/arginine repetitive matrix 1 
C19orf21              0.013   hypothetical protein LOC126353 
MAP2                  0.013   microtubule-associated protein 2 isoform 1 
LOC646021             0.013   PREDICTED: similar to hCG1774990 
LOC646021             0.013   PREDICTED: similar to hCG1774990 
LOC646021             0.013   PREDICTED: similar to hCG1774990 
EOMES                 0.010   eomesodermin 
CREBBP                0.010   CREB binding protein isoform b 
CREBBP                0.010   CREB binding protein isoform a 
CD3EAP                0.010   CD3E antigen, epsilon polypeptide associated protein ...
BCOR                  0.010   BCL-6 interacting corepressor isoform c 
PHF15                 0.010   PHD finger protein 15 
OLFML2B               0.010   olfactomedin-like 2B 
SIGLEC10              0.010   sialic acid binding Ig-like lectin 10 
EIF3CL                0.008   eukaryotic translation initiation factor 3, subunit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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