Guide to the Human Genome
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Name: HECTD2 Sequence: fasta or formatted (776aa) NCBI GI: 190341084
Description:

HECT domain containing 2 isoform a

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [207aa] HECT domain containing 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         47           2
 C cysteine            1.8         14           2
 D aspartate           5.7         44           2
 E glutamate           5.3         41           2
 F phenylalanine       5.9         46           1
 G glycine             4.4         34           2
 H histidine           2.7         21           2
 I isoleucine          5.9         46           3
 K lysine              7.6         59           3
 L leucine            10.4         81           3
 M methionine          1.8         14           1
 N asparagine          4.6         36           2
 P proline             6.2         48           3
 Q glutamine           4.3         33           2
 R arginine            4.1         32           2
 S serine              7.5         58           3
 T threonine           5.0         39           2
 V valine              6.3         49           2
 W tryptophan          1.2          9           2
 Y tyrosine            3.2         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HECT domain containing 2 isoform a 
HECTD2                0.239   HECT domain containing 2 isoform b 
UBE3A                 0.207   ubiquitin protein ligase E3A isoform 3 
UBE3A                 0.207   ubiquitin protein ligase E3A isoform 1 
UBE3A                 0.207   ubiquitin protein ligase E3A isoform 2 
HERC3                 0.185   hect domain and RLD 3 
HERC4                 0.181   hect domain and RLD 4 isoform b 
HERC4                 0.180   hect domain and RLD 4 isoform a 
ITCH                  0.125   itchy homolog E3 ubiquitin protein ligase 
WWP2                  0.115   WW domain containing E3 ubiquitin protein ligase 2 i...
WWP2                  0.115   WW domain containing E3 ubiquitin protein ligase 2 i...
HUWE1                 0.114   HECT, UBA and WWE domain containing 1 
HERC5                 0.114   hect domain and RLD 5 
WWP1                  0.112   WW domain containing E3 ubiquitin protein ligase 1 [...
NEDD4                 0.110   neural precursor cell expressed, developmentally do...
NEDD4                 0.110   neural precursor cell expressed, developmentally do...
SMURF2                0.109   SMAD specific E3 ubiquitin protein ligase 2 
SMURF1                0.108   Smad ubiquitination regulatory factor 1 isoform 1 [H...
SMURF1                0.108   Smad ubiquitination regulatory factor 1 isoform 2 [H...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
NEDD4L                0.103   neural precursor cell expressed, developmentally dow...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
NEDD4L                0.103   neural precursor cell expressed, developmentally do...
HECW2                 0.102   HECT, C2 and WW domain containing E3 ubiquitin prote...
HACE1                 0.101   HECT domain and ankyrin repeat containing, E3 ubiqu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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